Personal tools

FFCP PHASE1:Mm9::chr17:56857182..56857242,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr17:56857182..56857242,+ |short_description=p1@Gm4943,p1@Ndufa11 |description=CAGE_peak_1_at_Gm4943_5end,CAGE_peak_1_at_Ndufa11_5end |association_with_transcr...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr17:56857182..56857242,+
|DHSsupport=NA
|short_description=p1@Gm4943,p1@Ndufa11
|DPIdataset=NA
|description=CAGE_peak_1_at_Gm4943_5end,CAGE_peak_1_at_Ndufa11_5end
|association_with_transcript=0bp_to_ENSMUST00000002452,NM_027244,uc008dcz.2,uc008dda.2,uc008ddb.2_5end
|EntrezGene=239760,69875
|EntrezGene=239760,69875
|HGNC=
|HGNC=
|MCL_coexpression_id=282
|TSSclassifier=NA
|UniProt=G5E814,Q6PBG2
|UniProt=G5E814,Q6PBG2
|association_with_transcript=0bp_to_ENSMUST00000002452,NM_027244,uc008dcz.2,uc008dda.2,uc008ddb.2_5end
|cluster_id=chr17:56857182..56857242,+
|description=CAGE_peak_1_at_Gm4943_5end,CAGE_peak_1_at_Ndufa11_5end
|id=chr17:56857182..56857242,+
|ontology_enrichment_celltype=CL:0002321!3.28e-09!70;CL:0000220!3.28e-09!70;CL:0000055!1.09e-07!50
|ontology_enrichment_celltype_v019_2=CL:0002321,3.28e-09,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004535!4.83e-10!23;UBERON:0001009!4.83e-10!23;UBERON:0007100!8.84e-10!18;UBERON:0000948!8.84e-10!18;UBERON:0005498!8.84e-10!18;UBERON:0004140!8.84e-10!18;UBERON:0009881!8.84e-10!18;UBERON:0004141!8.84e-10!18;UBERON:0003084!8.84e-10!18;UBERON:0007005!8.84e-10!18;UBERON:0004139!8.84e-10!18;UBERON:0004291!8.84e-10!18;UBERON:0003103!5.80e-09!43;UBERON:0001017!1.96e-07!73;UBERON:0005743!1.96e-07!73;UBERON:0000073!5.52e-07!75;UBERON:0001016!5.52e-07!75;UBERON:0000025!8.91e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0004535,4.83e-10,23;UBERON:0001009,4.83e-10,23;UBERON:0007100,8.84e-10,18;UBERON:0000948,8.84e-10,18;UBERON:0005498,8.84e-10,18;UBERON:0004140,8.84e-10,18;UBERON:0009881,8.84e-10,18;UBERON:0004141,8.84e-10,18;UBERON:0003084,8.84e-10,18;UBERON:0007005,8.84e-10,18;UBERON:0004139,8.84e-10,18;UBERON:0004291,8.84e-10,18;UBERON:0003103,5.80e-09,43;UBERON:0010314,1.26e-08,92;UBERON:0001017,1.96e-07,73;UBERON:0000073,2.36e-07,54;UBERON:0001016,5.52e-07,75;UBERON:0000025,8.91e-07,114
|phase1_expression=122.994314576482,220.552457628076,205.65965620407,199.323915251201,202.862770628271,114.997301259645,131.05669137409,82.5098036791672,57.44179863788,54.7710991593465,103.586870776431,91.9772993216229,65.5698795636518,58.8339308279852,78.6139037884964,80.7876316885406,129.418947453707,65.7738614771926,66.9118435996005,84.453540707808,111.831926548657,102.766134492916,134.517891406552,188.31108162784,214.03885923567,275.057110811095,236.057573895173,203.189372422793,291.115878607165,322.850596222471,229.04761750693,159.392699038367,135.314253268605,47.5445043046316,167.245087835988,200.811451593059,164.560501147469,120.955641282966,169.549769761665,156.533599448166,89.9994176687452,86.0637311047642,137.399429907816,293.843173154997,289.228384769275,185.015126178975,337.210669414005,316.354501908028,282.955803362,278.812475272522,192.621316156499,339.256051901333,77.8511292107897,71.0854899171118,48.7336008756573,173.650119324264,145.558987488888,222.770343863855,171.968991730658,188.849779600116,194.586240876397,310.042746843256,271.234912813897,179.529993597639,286.771245144423,215.275474828668,261.550896482567,346.180693094721,92.3874445668536,121.910362313517,130.611800999208,282.508823575362,252.673610848646,125.798050793758,109.359682431808,138.802036778113,256.570002728576,191.531007127782,200.610132432654,164.066541936361,152.509901885217,159.920404760925,328.040023826623,301.64075897698,212.69516090532,187.383780361253,185.795043442829,157.134732830728,82.9201816998365,110.636763996334,55.0742528533188,234.895718415918,163.19312008986,239.628217087191,255.362132056934,264.335863387428,200.133298687746,117.59692257886,161.586894862984,153.349375337488,137.46317770204,62.8799739330157,33.1246811618639,21.3320010945999,193.110008582003,175.578386774243,201.198729115884,138.619229978939,30.2957323867191,87.1355356310521,111.204094457093,126.048708021226,134.218219403026,130.676529359124,72.3170548884585,121.896593589785,63.2819117399997,170.048843737816,106.153266233985,121.972204860347,109.316551637895,95.5204248676388,141.657738525773,106.279429315192,119.175176176856,196.701932510615,130.598485711453,139.777336321464,113.60078300332,164.769703345305,139.9951844625,76.1465373803958,139.407104794206,116.09481762797,171.840712850756,172.137980114891,63.1404055871961,99.6499834586845,181.960386072246,81.8618819398384,70.1349187568973,104.145653308363,75.265970258636,79.5721438172576,48.8502063906534,69.3095226741037,79.0842555284111,87.7004426805263,85.1493572084727,60.3248395735343,82.1691749845641,90.0894460277333,80.6337022754234,60.2476248083348,63.5866801500545,85.7837689987706,169.935591329803,138.710521934831,111.392091763072,150.166185088239,163.933715926786,218.775404675133,162.170143875869,272.518460970154,302.826342597923,354.149197854871,382.021323593058,335.466828620878,431.640486323059,554.229358731026,409.478557016117,543.717753234811,561.828745029799,556.688225018022,142.997165023607,79.3394561444283,178.756561594235,151.794625264874,92.5671007322915,80.3538884637117,71.779175956406,90.1525355066341,122.975058246213,144.761701471658,183.642746817726,163.381363086219,133.458995872943,105.049017237728,111.714421919256,161.78749355776,166.858574503264,137.805761092022,145.475280031014,84.4296508185896,96.9286526788492,110.175368364315,104.54039058335,86.3371942849821,100.293147879072,148.49580886748,196.876404713084,223.348866698459,163.938302779193,71.9102405636365,72.5302691967719,74.2044970870017,75.0582449137461,83.2061201145838,116.109388412327,84.0072721356367,96.6325951579211,135.9078995281,27.3159592401974,93.0352369171258,123.254880880251,125.784281217662,134.906854968478,113.856671041755,75.7488079683079,122.979926239045,69.7490099171871,109.825070496547,93.1720285705353,70.3526281255626,75.6978778017524,55.4179559916149,71.7239905683169,78.1770354460176,60.2739025525301,84.5534703933208,89.1054506428021,70.1547934120331,81.427293327207,189.82308365273,128.842239530987,94.3703672362185,216.101094123568,190.937837458699,88.5248705034047,349.167292323648,102.540171310283,128.844785617891,93.4937546160347,83.4001104854407,78.8707306251675,75.0152806590406,94.3208934902504,89.4302925208614,88.9397500379678,133.990988947894,79.770327887047,116.454904798385,58.9650792859945,88.5889560362515,110.178464822169,114.349679628996,137.859541975926,115.049098651098,134.657663153632,107.294866632431,59.1800791355226,76.7056169197537,93.402313136797,105.240240392627,121.231399861249,109.323675843078,84.0885826211856,94.7121354604692,120.562293285527,121.957772932976,88.4927765874945,109.696822825273,121.930824266172,134.269042559538,63.5960328852655,87.4866452667577,91.2987567947542,84.5866477589793,54.2520473698243,62.0619997510724,69.2359595218192,56.7927513117912,178.677752854098,165.399369393375,74.3288331470659,69.552374503606,61.4845830867443,66.8708022366653,51.2603353953844,57.1945433016307,63.0619975277203,69.2759689002107,55.8327894169872,201.435500401189,82.5636943246763,69.1286188231285,100.768982986741,109.771355407596,129.052275173991,133.245974228203,90.1749201963415,189.773057938421,162.796406454492,131.723934374428,173.617425114731,72.6650413773737,115.655484829511,84.7807181180048,111.852407131715,90.3915271375663,62.0819792436038,70.7009809702649,93.5345352277341,103.639587834357,116.364122528178,106.811758772324,180.830892038826,178.717065466799,146.160925850019,120.84301957555,97.9499079071636,91.5889325342163,100.281188951538,89.0524088542662,83.1416260606048,85.7022573663144,71.9239159859373,79.3747693532718,81.4632008205536,216.754246736142,95.6759459042219,113.757170180815,88.8109620565975,127.505132061246,130.063955487669,111.539339178764,86.3904567688635,73.2295271891631,126.504412746223,163.415458960048,158.119161709273,165.666467779315,171.955712462431,169.208233015293,184.956165063515,153.109209096235,163.131267234314,148.597209472772,87.5965213610451,81.0020493004093,98.6840241258896,70.5009479498053,101.033544386687,138.801848879761,126.013894663516,113.113246424153,119.061026758563,115.482625776055,134.344028941827,99.2174555690761,110.028771277112,100.903640190074,97.2956844108089,104.784612082276,86.9132444586416,103.785160609473,119.916997133762,111.429582541739,120.347107587281,120.328596576031,116.833733074187,128.922271552875,113.495912780889,119.391211735156,107.56164804919,120.222858127094,115.84090911052,118.962161591441,105.585166130515,94.0717806686631,120.723157735058,110.005157242036,110.921301314156,106.419306201565,109.713924360897,106.146300699859,145.952997368527,183.532060707437,204.043695345971
|phase1_expression=122.994314576482,220.552457628076,205.65965620407,199.323915251201,202.862770628271,114.997301259645,131.05669137409,82.5098036791672,57.44179863788,54.7710991593465,103.586870776431,91.9772993216229,65.5698795636518,58.8339308279852,78.6139037884964,80.7876316885406,129.418947453707,65.7738614771926,66.9118435996005,84.453540707808,111.831926548657,102.766134492916,134.517891406552,188.31108162784,214.03885923567,275.057110811095,236.057573895173,203.189372422793,291.115878607165,322.850596222471,229.04761750693,159.392699038367,135.314253268605,47.5445043046316,167.245087835988,200.811451593059,164.560501147469,120.955641282966,169.549769761665,156.533599448166,89.9994176687452,86.0637311047642,137.399429907816,293.843173154997,289.228384769275,185.015126178975,337.210669414005,316.354501908028,282.955803362,278.812475272522,192.621316156499,339.256051901333,77.8511292107897,71.0854899171118,48.7336008756573,173.650119324264,145.558987488888,222.770343863855,171.968991730658,188.849779600116,194.586240876397,310.042746843256,271.234912813897,179.529993597639,286.771245144423,215.275474828668,261.550896482567,346.180693094721,92.3874445668536,121.910362313517,130.611800999208,282.508823575362,252.673610848646,125.798050793758,109.359682431808,138.802036778113,256.570002728576,191.531007127782,200.610132432654,164.066541936361,152.509901885217,159.920404760925,328.040023826623,301.64075897698,212.69516090532,187.383780361253,185.795043442829,157.134732830728,82.9201816998365,110.636763996334,55.0742528533188,234.895718415918,163.19312008986,239.628217087191,255.362132056934,264.335863387428,200.133298687746,117.59692257886,161.586894862984,153.349375337488,137.46317770204,62.8799739330157,33.1246811618639,21.3320010945999,193.110008582003,175.578386774243,201.198729115884,138.619229978939,30.2957323867191,87.1355356310521,111.204094457093,126.048708021226,134.218219403026,130.676529359124,72.3170548884585,121.896593589785,63.2819117399997,170.048843737816,106.153266233985,121.972204860347,109.316551637895,95.5204248676388,141.657738525773,106.279429315192,119.175176176856,196.701932510615,130.598485711453,139.777336321464,113.60078300332,164.769703345305,139.9951844625,76.1465373803958,139.407104794206,116.09481762797,171.840712850756,172.137980114891,63.1404055871961,99.6499834586845,181.960386072246,81.8618819398384,70.1349187568973,104.145653308363,75.265970258636,79.5721438172576,48.8502063906534,69.3095226741037,79.0842555284111,87.7004426805263,85.1493572084727,60.3248395735343,82.1691749845641,90.0894460277333,80.6337022754234,60.2476248083348,63.5866801500545,85.7837689987706,169.935591329803,138.710521934831,111.392091763072,150.166185088239,163.933715926786,218.775404675133,162.170143875869,272.518460970154,302.826342597923,354.149197854871,382.021323593058,335.466828620878,431.640486323059,554.229358731026,409.478557016117,543.717753234811,561.828745029799,556.688225018022,142.997165023607,79.3394561444283,178.756561594235,151.794625264874,92.5671007322915,80.3538884637117,71.779175956406,90.1525355066341,122.975058246213,144.761701471658,183.642746817726,163.381363086219,133.458995872943,105.049017237728,111.714421919256,161.78749355776,166.858574503264,137.805761092022,145.475280031014,84.4296508185896,96.9286526788492,110.175368364315,104.54039058335,86.3371942849821,100.293147879072,148.49580886748,196.876404713084,223.348866698459,163.938302779193,71.9102405636365,72.5302691967719,74.2044970870017,75.0582449137461,83.2061201145838,116.109388412327,84.0072721356367,96.6325951579211,135.9078995281,27.3159592401974,93.0352369171258,123.254880880251,125.784281217662,134.906854968478,113.856671041755,75.7488079683079,122.979926239045,69.7490099171871,109.825070496547,93.1720285705353,70.3526281255626,75.6978778017524,55.4179559916149,71.7239905683169,78.1770354460176,60.2739025525301,84.5534703933208,89.1054506428021,70.1547934120331,81.427293327207,189.82308365273,128.842239530987,94.3703672362185,216.101094123568,190.937837458699,88.5248705034047,349.167292323648,102.540171310283,128.844785617891,93.4937546160347,83.4001104854407,78.8707306251675,75.0152806590406,94.3208934902504,89.4302925208614,88.9397500379678,133.990988947894,79.770327887047,116.454904798385,58.9650792859945,88.5889560362515,110.178464822169,114.349679628996,137.859541975926,115.049098651098,134.657663153632,107.294866632431,59.1800791355226,76.7056169197537,93.402313136797,105.240240392627,121.231399861249,109.323675843078,84.0885826211856,94.7121354604692,120.562293285527,121.957772932976,88.4927765874945,109.696822825273,121.930824266172,134.269042559538,63.5960328852655,87.4866452667577,91.2987567947542,84.5866477589793,54.2520473698243,62.0619997510724,69.2359595218192,56.7927513117912,178.677752854098,165.399369393375,74.3288331470659,69.552374503606,61.4845830867443,66.8708022366653,51.2603353953844,57.1945433016307,63.0619975277203,69.2759689002107,55.8327894169872,201.435500401189,82.5636943246763,69.1286188231285,100.768982986741,109.771355407596,129.052275173991,133.245974228203,90.1749201963415,189.773057938421,162.796406454492,131.723934374428,173.617425114731,72.6650413773737,115.655484829511,84.7807181180048,111.852407131715,90.3915271375663,62.0819792436038,70.7009809702649,93.5345352277341,103.639587834357,116.364122528178,106.811758772324,180.830892038826,178.717065466799,146.160925850019,120.84301957555,97.9499079071636,91.5889325342163,100.281188951538,89.0524088542662,83.1416260606048,85.7022573663144,71.9239159859373,79.3747693532718,81.4632008205536,216.754246736142,95.6759459042219,113.757170180815,88.8109620565975,127.505132061246,130.063955487669,111.539339178764,86.3904567688635,73.2295271891631,126.504412746223,163.415458960048,158.119161709273,165.666467779315,171.955712462431,169.208233015293,184.956165063515,153.109209096235,163.131267234314,148.597209472772,87.5965213610451,81.0020493004093,98.6840241258896,70.5009479498053,101.033544386687,138.801848879761,126.013894663516,113.113246424153,119.061026758563,115.482625776055,134.344028941827,99.2174555690761,110.028771277112,100.903640190074,97.2956844108089,104.784612082276,86.9132444586416,103.785160609473,119.916997133762,111.429582541739,120.347107587281,120.328596576031,116.833733074187,128.922271552875,113.495912780889,119.391211735156,107.56164804919,120.222858127094,115.84090911052,118.962161591441,105.585166130515,94.0717806686631,120.723157735058,110.005157242036,110.921301314156,106.419306201565,109.713924360897,106.146300699859,145.952997368527,183.532060707437,204.043695345971
|short_description=p1@Gm4943,p1@Ndufa11
}}
}}

Latest revision as of 17:23, 26 September 2015

Short description:p1@Gm4943, p1@Ndufa11
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gm4943_5end, CAGE_peak_1_at_Ndufa11_5end
Coexpression cluster:MCL_coexpression_mm9:282
Association with transcript: 0bp_to_ENSMUST00000002452, NM_027244, uc008dcz.2, uc008dda.2, uc008ddb.2_5end
EntrezGene:239760,69875
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gm4943p1@Ndufa11

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7122.99
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5220.55
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6205.66
CD326+ enterocyte, pool1.CNhs13542.11848-124I3199.32
CD326+ enterocyte, pool2.CNhs13197.11849-124I4202.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7115.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8131.06
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E982.51
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E757.44
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F254.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6103.59
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F191.98
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E465.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E858.83
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A178.61
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A380.79
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5129.42
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A265.77
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A466.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A684.45
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3111.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2102.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9134.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1188.31
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2214.04
GP2+ M cell, pool1.CNhs13228.11845-124H9275.06
GP2+ M cell, pool2.CNhs13231.11846-124I1236.06
GP2+ M cell, pool3.CNhs13240.11847-124I2203.19
Ileum epithelium, pool1.CNhs13199.10252-104B9291.12
Ileum epithelium, pool2.CNhs13232.10253-104C1322.85
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8229.05
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3159.39
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6135.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5167.25
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6200.81
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7164.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8120.96
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1169.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3156.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G990.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H286.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4137.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8293.84
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9289.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3185.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7337.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2316.35
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8282.96
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3278.81
Mouse Astrocytes, donor2.CNhs12078.11552-120C4192.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C4339.26
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A277.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I971.09
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A148.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1173.65
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1145.56
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5222.77
Mouse Granule cells, donor1.CNhs12131.11713-123C3171.97
Mouse Granule cells, donor2.CNhs12357.11731-123E3188.85
Mouse Granule cells, donor3.CNhs12108.11636-122C7194.59
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6310.04
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1271.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7179.53
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7286.77
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2215.28
Mouse Microglia, donor1.CNhs12629.11718-123C8261.55
Mouse Microglia, donor2.CNhs12634.11736-123E8346.18
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D592.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5121.91
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9130.61
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1282.51
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5252.67
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2125.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2109.36
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6138.80
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3256.57
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3191.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7200.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4164.07
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4152.51
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8159.92
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4328.04
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5301.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6212.70
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6187.38
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6185.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1157.13
Mouse Schwann, donor1.CNhs12507.11728-123D982.92
Mouse Schwann, donor2.CNhs12573.11746-123F9110.64
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G355.07
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7234.90
Mouse hepatocyte, donor1.CNhs13078.11714-123C4163.19
Mouse hepatocyte, donor3.CNhs12615.11637-122C8239.63
Mouse hepatocyte, donor6.CNhs13090.11822-124F4255.36
Mouse hepatocyte, donor8.CNhs13091.11824-124F6264.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7200.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7117.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3161.59
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8153.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6137.46
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H162.88
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I833.12
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1193.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2175.58
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3201.20
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6138.62
accessory axillary lymph node, adult.CNhs10475.1063-29H930.30
adrenal gland, adult.CNhs10508.49-24D787.14
adrenal gland, embryo E14.CNhs11038.406-44C5111.20
adrenal gland, embryo E16.CNhs11004.1254-43D6126.05
adrenal gland, embryo E17.CNhs11043.1263-45I1134.22
adrenal gland, embryo E18.CNhs11026.1262-18F5130.68
adrenal gland, neonate N00.CNhs11191.1311-23C172.32
adrenal gland, neonate N25.CNhs11223.1377-27I3121.90
amnion, adult pregnant day17.5.CNhs10488.583-22A863.28
aorta, adult.CNhs10498.46-23H1170.05
bone (os femoris), adult.CNhs10483.56-12G2106.15
bone (os femoris), neonate N02.CNhs11227.1985-43F5121.97
bone (os femoris), neonate N16.CNhs11225.1525-43A6109.32
bone (os femoris), neonate N20.CNhs11195.1350-25C395.52
cecum, adult.CNhs10467.37-13H4141.66
cerebellum, adult.CNhs10494.15-8B2106.28
cerebellum, neonate N30.CNhs11135.1395-42I2119.18
colon, adult.CNhs10468.36-18H7196.70
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7130.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1139.78
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4113.60
corpora quadrigemina, adult.CNhs10501.16-22A4164.77
corpus striatum, adult.CNhs10487.19-21D8140.00
corpus striatum, neonate N00.CNhs11226.630-43F176.15
cortex, adult.CNhs10473.12-14D5139.41
cortex, neonate N30.CNhs11107.1392-42F2116.09
diencephalon, adult.CNhs10482.20-12F2171.84
diencephalon, neonate N30.CNhs11201.1388-42B2172.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B163.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A299.65
epididymis, adult.CNhs10490.58-23B2181.96
eyeball, adult.CNhs10484.31-12G481.86
eyeball, embryo E12.CNhs11016.345-16C670.13
eyeball, embryo E14.CNhs10521.399-16E2104.15
eyeball, embryo E15.CNhs10593.426-16C975.27
eyeball, embryo E17.CNhs11023.1261-18D479.57
eyeball, neonate N00.CNhs11207.633-15C648.85
eyeball, neonate N01.CNhs11140.1532-43E769.31
eyeball, neonate N02.CNhs11205.1551-44G879.08
eyeball, neonate N16.CNhs11188.777-19A287.70
forelimb, embryo E11.CNhs10596.335-25E285.15
forelimb, embryo E12.CNhs10600.359-14H260.32
forelimb, embryo E13.CNhs10589.384-1E282.17
forelimb, embryo E14.CNhs10577.413-26A890.09
forelimb, embryo E15.CNhs11007.437-20E780.63
forelimb, embryo E17.CNhs10598.1517-43C460.25
forelimb, embryo E18.CNhs11008.1520-43B563.59
gonad, embryo E13.CNhs11044.1564-45I685.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8169.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2138.71
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5111.39
heart, embryo E11.CNhs10586.331-24E9150.17
heart, embryo E12.CNhs11015.353-12F5163.93
heart, embryo E13.CNhs11013.376-3I9218.78
heart, embryo E14.CNhs10597.403-26D4162.17
heart, embryo E15.CNhs11017.431-16C8272.52
heart, embryo E16.CNhs11021.457-17C6302.83
heart, embryo E17.CNhs11025.479-18E5354.15
heart, embryo E18.CNhs11030.1283-20G3382.02
heart, neonate N00.CNhs11213.639-21E3335.47
heart, neonate N03.CNhs11221.1349-25I2431.64
heart, neonate N10.CNhs11118.749-24G1554.23
heart, neonate N16.CNhs11209.782-15G1409.48
heart, neonate N20.CNhs11127.821-26I6543.72
heart, neonate N25.CNhs11196.1351-25D3561.83
heart, neonate N30.CNhs11202.1390-42D2556.69
hippocampus, adult.CNhs10478.13-16E8143.00
hippocampus, neonate N00.CNhs11228.627-43G179.34
intestinal mucosa, adult.CNhs10506.860-29I3178.76
intestine, adult.CNhs10496.178-9A3151.79
intestine, embryo E12.CNhs11019.1251-16I592.57
intestine, embryo E13.CNhs11010.381-16D580.35
intestine, embryo E15.CNhs10602.976-16D871.78
intestine, embryo E16.CNhs10585.463-22H490.15
intestine, embryo E17.CNhs10582.482-18D3122.98
intestine, embryo E18.CNhs10526.1289-20F7144.76
intestine, neonate N00.CNhs11126.644-26D1183.64
intestine, neonate N01.CNhs11192.1322-23E9163.38
intestine, neonate N06.CNhs11102.688-20B8133.46
intestine, neonate N07.CNhs11095.720-20F2105.05
intestine, neonate N10.CNhs11098.755-23A5111.71
intestine, neonate N20.CNhs11187.827-18D1161.79
intestine, neonate N25.CNhs11121.1352-25E3166.86
intestine, neonate N30.CNhs11131.1384-42G1137.81
kidney, embryo E14.CNhs10606.411-4I9145.48
kidney, embryo E15.CNhs10997.434-16F884.43
kidney, embryo E16.CNhs10584.464-22A596.93
kidney, embryo E17.CNhs11028.483-18I2110.18
kidney, embryo E18.CNhs11001.1288-20C7104.54
kidney, neonate N00.CNhs11214.646-21G786.34
kidney, neonate N10.CNhs11206.758-6D5100.29
kidney, neonate N20.CNhs11113.832-19I1148.50
kidney, neonate N25.CNhs11122.1353-25F3196.88
kidney, neonate N30.CNhs11203.1385-42H1223.35
liver, adult pregnant day01.CNhs10466.508-5B2163.94
liver, embryo E12.CNhs10601.355-15F871.91
liver, embryo E13.CNhs10524.378-3H672.53
liver, embryo E14.CNhs10594.409-16E174.20
liver, embryo E15.CNhs10520.433-16D775.06
liver, embryo E16.CNhs10523.462-17F583.21
liver, embryo E17.CNhs10510.481-18A3116.11
liver, embryo E18.CNhs10579.499-43G484.01
liver, neonate N00.CNhs11117.641-24F496.63
liver, neonate N03.CNhs11123.1345-25G2135.91
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H293.04
liver, neonate N10.CNhs11115.751-24B9123.25
liver, neonate N20.CNhs11220.823-25A3125.78
liver, neonate N25.CNhs11198.1368-26H1134.91
liver, neonate N30.CNhs11106.1382-42D1113.86
lung, adult.CNhs10474.28-22B175.75
lung, embryo E12.CNhs10522.354-16G2122.98
lung, embryo E14.CNhs10604.404-26F869.75
lung, embryo E15.CNhs11020.432-17C5109.83
lung, embryo E16.CNhs10998.458-17B693.17
lung, embryo E17.CNhs10605.480-44A670.35
lung, embryo E18.CNhs10583.1287-20I675.70
lung, neonate N00.CNhs11224.640-42C655.42
lung, neonate N06.CNhs11212.683-20E571.72
lung, neonate N07.CNhs11111.715-19A378.18
lung, neonate N10.CNhs11219.750-23E660.27
lung, neonate N20.CNhs11109.822-18A484.55
lung, neonate N25.CNhs11119.1359-25C789.11
lung, neonate N30.CNhs11133.1394-42H270.15
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A181.43
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1189.82
mammary gland, adult lactating day02.CNhs10480.595-22B6128.84
mammary gland, adult pregnant day19.CNhs10476.588-5H294.37
medulla oblongata, adult.CNhs10477.17-12C2216.10
medulla oblongata, neonate N30.CNhs11200.1396-42A3190.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C788.52
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2349.17
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1102.54
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2128.84
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E393.49
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D783.40
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D878.87
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D975.02
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D494.32
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D589.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D688.94
olfactory brain, adult.CNhs10489.18-22I9133.99
ovary, adult.CNhs10507.91-2I779.77
ovary, embryo E18.CNhs11040.505-44H7116.45
ovary, neonate N00.CNhs11217.1299-22I458.97
oviduct, adult pregnant day01.CNhs10500.988-6G688.59
pancreas, adult.CNhs10486.34-16E4110.18
pancreas, embryo E14.CNhs11012.405-44F4114.35
pancreas, embryo E15.CNhs11042.1556-45F2137.86
pancreas, embryo E16.CNhs11003.460-26E5115.05
pancreas, embryo E17.CNhs10599.1558-45G3134.66
pancreas, embryo E18.CNhs10580.1535-43I7107.29
pancreas, neonate N00.CNhs11105.645-26G959.18
pancreas, neonate N01.CNhs11138.1531-43D776.71
pancreas, neonate N02.CNhs11139.1539-43D893.40
pancreas, neonate N16.CNhs11136.787-43B6105.24
pancreas, neonate N25.CNhs11094.1555-45E2121.23
pancreas, neonate N30.CNhs11182.1548-44H5109.32
pituitary gland, adult.CNhs10493.21-1G884.09
pituitary gland, embryo E12.CNhs11018.346-16E694.71
pituitary gland, embryo E13.CNhs11009.370-44C7120.56
pituitary gland, embryo E14.CNhs11037.398-44A5121.96
pituitary gland, embryo E15.CNhs10592.427-16B988.49
pituitary gland, embryo E16.CNhs11036.449-43F6109.70
pituitary gland, embryo E17.CNhs11039.1265-44F5121.93
pituitary gland, neonate N00.CNhs11190.1308-22E9134.27
placenta, adult pregnant day10.CNhs10472.539-13I763.60
placenta, adult pregnant day17.CNhs10464.577-18G387.49
prostate, adult.CNhs10470.859-1F891.30
skin, adult.CNhs10492.30-1C384.59
skin, neonate N00.CNhs11124.650-25G454.25
skin, neonate N03.CNhs11215.662-22H362.06
skin, neonate N06.CNhs11097.693-20I569.24
skin, neonate N10.CNhs11108.762-6C456.79
small intestine, neonate N16.CNhs11114.790-21I1178.68
spinal cord, adult.CNhs10505.24-13C9165.40
spleen, adult.CNhs10465.25-2G274.33
spleen, embryo E16.CNhs11035.461-43C169.55
spleen, embryo E18.CNhs11011.1271-21F261.48
spleen, neonate N10.CNhs11116.752-24D166.87
spleen, neonate N20.CNhs11112.824-19H151.26
spleen, neonate N25.CNhs11099.1354-25G357.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C663.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C969.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D355.83
stomach, adult.CNhs10503.33-1H6201.44
stomach, embryo E12.CNhs10588.356-43E382.56
stomach, embryo E15.CNhs10603.1252-16G869.13
stomach, embryo E16.CNhs11022.459-17D4100.77
stomach, embryo E17.CNhs11006.1035-18D5109.77
stomach, embryo E18.CNhs10999.1286-20C6129.05
stomach, neonate N03.CNhs11193.1340-24B8133.25
stomach, neonate N07.CNhs11210.718-18A990.17
stomach, neonate N25.CNhs11104.1355-25E4189.77
stomach, neonate N30.CNhs11134.1386-42I1162.80
submandibular gland, adult.CNhs10469.59-29C1131.72
testis, adult.CNhs10504.57-7G5173.62
testis, embryo E13.CNhs11031.389-23F572.67
testis, embryo E15.CNhs11034.443-27C5115.66
testis, embryo E16.CNhs11033.470-26G584.78
testis, embryo E17.CNhs11029.486-18I5111.85
testis, embryo E18.CNhs11027.503-18G590.39
testis, neonate N00.CNhs11189.1300-22B762.08
testis, neonate N07.CNhs11222.726-26I470.70
testis, neonate N10.CNhs11204.763-44D993.53
testis, neonate N20.CNhs11110.839-18H3103.64
testis, neonate N30.CNhs11130.1391-42E2116.36
thymus, adult.CNhs10471.38-12B5106.81
thymus, embryo E14.CNhs11041.402-44I4180.83
thymus, embryo E15.CNhs11005.430-45I2178.72
thymus, embryo E16.CNhs11002.456-26C5146.16
thymus, embryo E17.CNhs10581.478-18C1120.84
thymus, embryo E18.CNhs10595.1273-19G497.95
thymus, neonate N02.CNhs11181.1541-43F891.59
thymus, neonate N03.CNhs11137.2104-43C7100.28
thymus, neonate N06.CNhs11197.681-26C489.05
thymus, neonate N07.CNhs11211.713-19D383.14
thymus, neonate N10.CNhs11194.748-24E485.70
thymus, neonate N20.CNhs11186.820-7A271.92
thymus, neonate N25.CNhs11125.1362-25G779.37
thymus, neonate N30.CNhs11132.1393-42G281.46
tongue, adult.CNhs10499.32-1B4216.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H395.68
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7113.76
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G588.81
urinary bladder, adult.CNhs10481.879-12E4127.51
uterus, adult pregnant day19.CNhs10497.590-15F5130.06
uterus, adult.CNhs10509.92-27E5111.54
vagina, adult.CNhs10502.89-27D586.39
vesicular gland, adult.CNhs10491.51-27F873.23
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1126.50
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2163.42
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3158.12
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7165.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4171.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5169.21
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6184.96
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7153.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8163.13
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9148.60
whole body, embryo E11.CNhs11014.324-5I887.60
whole body, embryo E12.CNhs10587.857-27C981.00
whole body, embryo E13.CNhs10512.372-23H298.68
whole body, embryo E14.5.CNhs10578.420-27D270.50
whole body, embryo E14.CNhs10519.395-14B1101.03
whole body, embryo E16.CNhs10514.453-14F2138.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5126.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5113.11
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5119.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5115.48
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5134.34
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G599.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5110.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5100.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G597.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5104.78
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G586.91
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5103.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5119.92
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5111.43
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5120.35
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5120.33
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5116.83
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5128.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5113.50
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5119.39
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5107.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5120.22
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5115.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5118.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5105.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G594.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5120.72
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5110.01
whole body, embryo E17.5.CNhs10513.490-9F9110.92
whole body, embryo E17.CNhs10517.475-3I5106.42
whole body, embryo E18.CNhs10516.493-3B3109.71
whole body, neonate N00.CNhs10525.657-19C2106.15
whole body, neonate N01.CNhs10576.659-23C6145.95
whole body, neonate N06.CNhs10515.692-21D1183.53
whole body, neonate N10.CNhs10518.761-6B4204.04





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell3.28e-0970
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:56857182..56857242,%2B&oldid=4265203"