FFCP PHASE1:Mm9::chr4:154998608..154998623,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12537 | |EntrezGene=12537 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |MCL_coexpression_id=24 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-339bp_to_ENSMUST00000135550_5end | |association_with_transcript=-339bp_to_ENSMUST00000135550_5end | ||
|cluster_id=chr4:154998608..154998623,+ | |||
|description=CAGE_peak_3_at_Cdk11b_5end | |description=CAGE_peak_3_at_Cdk11b_5end | ||
|id=chr4:154998608..154998623,+ | |id=chr4:154998608..154998623,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.60e-15,6;CL:0000677,1.60e-15,6;CL:0000584,1.60e-15,6;CL:0000075,3.38e-13,7;CL:0002563,3.47e-13,9;CL:0002251,3.47e-13,9;CL:0000066,4.20e-12,25;CL:0002076,1.11e-09,15;CL:0000223,1.26e-08,20;CL:0000682,2.47e-08,3;CL:0000791,5.73e-07,9;CL:0000789,5.73e-07,9;CL:0002420,5.73e-07,9;CL:0002419,5.73e-07,9;CL:0000790,5.73e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.14e-10!15;UBERON:0001242!2.05e-09!13;UBERON:0000060!2.05e-09!13;UBERON:0001262!2.05e-09!13;UBERON:0004786!2.05e-09!13;UBERON:0004923!3.19e-07!24;UBERON:0000160!9.83e-07!43 | |ontology_enrichment_uberon=UBERON:0000344!1.14e-10!15;UBERON:0001242!2.05e-09!13;UBERON:0000060!2.05e-09!13;UBERON:0001262!2.05e-09!13;UBERON:0004786!2.05e-09!13;UBERON:0004923!3.19e-07!24;UBERON:0000160!9.83e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.64e-25,15;UBERON:0001242,1.44e-21,13;UBERON:0001262,1.44e-21,13;UBERON:0004786,1.44e-21,13;UBERON:0000160,9.34e-20,31;UBERON:0004923,7.46e-15,24;UBERON:0003350,3.47e-13,9;UBERON:0004808,3.47e-13,9;UBERON:0001277,3.47e-13,9;UBERON:0005409,1.11e-11,47;UBERON:0000485,1.35e-10,11;UBERON:0002108,1.49e-09,4;UBERON:0000331,1.24e-07,3;UBERON:0002116,1.24e-07,3;UBERON:0001204,1.24e-07,3;UBERON:0001168,1.24e-07,3 | |||
|phase1_expression=0,11.5161884520989,6.82498859084304,19.9626379462508,18.0322462780685,1.51091344720701,1.40167584357315,1.16210991097419,7.180224829735,7.2560003159818,0.34243593645101,0.319088635981346,0.684802919724823,0.524522414513984,0,0,0,0,0,0,0.255129870453209,0,0,2.23989391910769,1.14704640533585,5.7423196411502,2.15380998079537,4.30942465371778,4.18051522804023,1.00812051903972,1.55211357458713,0,0,0,0.288851619751275,0.332469290716985,1.02084678131185,0.837063261473815,0.7813353445238,0,0,0.683045484958446,0,0.251793635951155,0.304130793658544,0.367093504323363,0.782391344348039,0,0,0,0.139986421625363,0,0.167782606057736,3.62681071005672,3.02484419228218,0,0,0,0,0,0,0,0.889294796111139,0,0,0.7104801149461,0,0,0,0,0.630974884054146,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0,0.45839474333043,0,0.427115042397309,0,0.37863096666592,0.0755715601067855,1.15945795480671,0,0.679971333707751,0,0.649776417447669,0,0.561777680527007,0,0,0.35333957451034,0.281686839553361,0,2.54805239706646,0,0,0,0,0.68510327831436,0.517875767294343,0.29688427812965,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0,0.209446706813455,3.0654846625031,0.479260498023681,0,0,0,0,0.125654352112864,0,0,0.41557608911912,0.324482526135515,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0.229902104433473,0,0,0,0.2562274405697,0,0.258703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0.568326998791185,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.268412837520744,0.210289948564127,0.205809224758569,16.1905203662061,2.90895623329899,0,0,0,0,0.22237804384487,0,3.32170343081158,0.494096864172033,0.502670417600539,0.795825888164603,0.38992817423824,0.898819408654221,2.59365659849633,3.78368419183298,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0.169745085775188,0.234690248288502,0,0.476087281772027,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0.809621403349789,0.876767573733936,0.395287777946524,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0.704015124191131,0.21183207086382,0,5.93590510589328,0.161464426695906,0.844380948994182,2.626191568069,8.042904087508,1.45740418314925,0.556275906031529,0,0,0,0,0,0.228778173206523,1.5298058699447,2.23922323717853,1.10559979043539,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0,0.518459893167171,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0,0,0,0.201652370273681,0,0,0.116876902181569,0.680191150845634,0,0.179427713218951,0.503653849092235,0.19318959403219,0.187682475451182,2.38097111547445,0.214368379079066,0,0,0,1.14579102687879,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0,0.419226325255965,0,0.666740183404846,0,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.0640251524048693,0,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.532427418478012,0,0,0.188218760830661,0.0846146078916765,0.365855945745545,0,0,0,0.118635018124174,0,0,0.309873682371932,0,0.499621155875892,0.467863216890817,0,0,0.441182838239031,0 | |phase1_expression=0,11.5161884520989,6.82498859084304,19.9626379462508,18.0322462780685,1.51091344720701,1.40167584357315,1.16210991097419,7.180224829735,7.2560003159818,0.34243593645101,0.319088635981346,0.684802919724823,0.524522414513984,0,0,0,0,0,0,0.255129870453209,0,0,2.23989391910769,1.14704640533585,5.7423196411502,2.15380998079537,4.30942465371778,4.18051522804023,1.00812051903972,1.55211357458713,0,0,0,0.288851619751275,0.332469290716985,1.02084678131185,0.837063261473815,0.7813353445238,0,0,0.683045484958446,0,0.251793635951155,0.304130793658544,0.367093504323363,0.782391344348039,0,0,0,0.139986421625363,0,0.167782606057736,3.62681071005672,3.02484419228218,0,0,0,0,0,0,0,0.889294796111139,0,0,0.7104801149461,0,0,0,0,0.630974884054146,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0,0.45839474333043,0,0.427115042397309,0,0.37863096666592,0.0755715601067855,1.15945795480671,0,0.679971333707751,0,0.649776417447669,0,0.561777680527007,0,0,0.35333957451034,0.281686839553361,0,2.54805239706646,0,0,0,0,0.68510327831436,0.517875767294343,0.29688427812965,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0,0.209446706813455,3.0654846625031,0.479260498023681,0,0,0,0,0.125654352112864,0,0,0.41557608911912,0.324482526135515,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0.229902104433473,0,0,0,0.2562274405697,0,0.258703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0.568326998791185,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.268412837520744,0.210289948564127,0.205809224758569,16.1905203662061,2.90895623329899,0,0,0,0,0.22237804384487,0,3.32170343081158,0.494096864172033,0.502670417600539,0.795825888164603,0.38992817423824,0.898819408654221,2.59365659849633,3.78368419183298,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0.169745085775188,0.234690248288502,0,0.476087281772027,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0.809621403349789,0.876767573733936,0.395287777946524,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0.704015124191131,0.21183207086382,0,5.93590510589328,0.161464426695906,0.844380948994182,2.626191568069,8.042904087508,1.45740418314925,0.556275906031529,0,0,0,0,0,0.228778173206523,1.5298058699447,2.23922323717853,1.10559979043539,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0,0.518459893167171,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0,0,0,0.201652370273681,0,0,0.116876902181569,0.680191150845634,0,0.179427713218951,0.503653849092235,0.19318959403219,0.187682475451182,2.38097111547445,0.214368379079066,0,0,0,1.14579102687879,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0,0.419226325255965,0,0.666740183404846,0,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.0640251524048693,0,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.532427418478012,0,0,0.188218760830661,0.0846146078916765,0.365855945745545,0,0,0,0.118635018124174,0,0,0.309873682371932,0,0.499621155875892,0.467863216890817,0,0,0.441182838239031,0 | ||
|short_description=p3@Cdk11b | |short_description=p3@Cdk11b | ||
}} | }} |
Latest revision as of 20:04, 26 September 2015
Short description: | p3@Cdk11b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cdk11b_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -339bp_to_ENSMUST00000135550_5end |
EntrezGene: | Cdk11b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.60e-15 | 6 |
gut absorptive cell | 1.60e-15 | 6 |
enterocyte | 1.60e-15 | 6 |
columnar/cuboidal epithelial cell | 3.38e-13 | 7 |
intestinal epithelial cell | 3.47e-13 | 9 |
epithelial cell of alimentary canal | 3.47e-13 | 9 |
epithelial cell | 4.20e-12 | 25 |
endo-epithelial cell | 1.11e-09 | 15 |
endodermal cell | 1.26e-08 | 20 |
M cell of gut | 2.47e-08 | 3 |
mature alpha-beta T cell | 5.73e-07 | 9 |
alpha-beta T cell | 5.73e-07 | 9 |
immature T cell | 5.73e-07 | 9 |
mature T cell | 5.73e-07 | 9 |
immature alpha-beta T cell | 5.73e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.64e-25 | 15 |
intestinal mucosa | 1.44e-21 | 13 |
wall of intestine | 1.44e-21 | 13 |
gastrointestinal system mucosa | 1.44e-21 | 13 |
intestine | 9.34e-20 | 31 |
organ component layer | 7.46e-15 | 24 |
epithelium of mucosa | 3.47e-13 | 9 |
gastrointestinal system epithelium | 3.47e-13 | 9 |
intestinal epithelium | 3.47e-13 | 9 |
gastrointestinal system | 1.11e-11 | 47 |
simple columnar epithelium | 1.35e-10 | 11 |
small intestine | 1.49e-09 | 4 |
ileal mucosa | 1.24e-07 | 3 |
ileum | 1.24e-07 | 3 |
mucosa of small intestine | 1.24e-07 | 3 |
wall of small intestine | 1.24e-07 | 3 |