FFCP PHASE1:Mm9::chr15:68141338..68141346,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100039601,100042650,100043184,100043348,100043498,100046290,100503563,100504174,100505283,19933,432725,545423,634339,666431 | |EntrezGene=100039601,100042650,100043184,100043348,100043498,100046290,100503563,100504174,100505283,19933,432725,545423,634339,666431 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2147 | |MCL_coexpression_id=2147 | ||
|TSSclassifier=NA | |||
|UniProt=Q9CQM8 | |UniProt=Q9CQM8 | ||
|association_with_transcript=-34bp_to_ENSMUST00000089785_5end | |association_with_transcript=-34bp_to_ENSMUST00000089785_5end | ||
|cluster_id=chr15:68141338..68141346,+ | |||
|description=CAGE_peak_2_at_Gm10045_5end,CAGE_peak_2_at_Gm10095_5end,CAGE_peak_2_at_Gm10163_5end,CAGE_peak_2_at_Gm10240_5end,CAGE_peak_2_at_Gm11703_5end,CAGE_peak_2_at_Gm13370_5end,CAGE_peak_2_at_Gm13653_5end,CAGE_peak_2_at_Gm15682_5end,CAGE_peak_2_at_Gm4478_5end,CAGE_peak_2_at_Gm5445_5end,CAGE_peak_2_at_Gm8101_5end,CAGE_peak_2_at_LOC100505283_5end,CAGE_peak_2_at_LOC634339_5end,CAGE_peak_2_at_Rpl21_5end | |description=CAGE_peak_2_at_Gm10045_5end,CAGE_peak_2_at_Gm10095_5end,CAGE_peak_2_at_Gm10163_5end,CAGE_peak_2_at_Gm10240_5end,CAGE_peak_2_at_Gm11703_5end,CAGE_peak_2_at_Gm13370_5end,CAGE_peak_2_at_Gm13653_5end,CAGE_peak_2_at_Gm15682_5end,CAGE_peak_2_at_Gm4478_5end,CAGE_peak_2_at_Gm5445_5end,CAGE_peak_2_at_Gm8101_5end,CAGE_peak_2_at_LOC100505283_5end,CAGE_peak_2_at_LOC634339_5end,CAGE_peak_2_at_Rpl21_5end | ||
|id=chr15:68141338..68141346,+ | |id=chr15:68141338..68141346,+ | ||
Latest revision as of 22:26, 26 September 2015
| Short description: | p2@Gm10045, p2@Gm10095, p2@Gm10163, p2@Gm10240, p2@Gm11703, p2@Gm13370, p2@Gm13653, p2@Gm15682, p2@Gm4478, p2@Gm5445, p2@Gm8101, p2@LOC100505283, p2@LOC634339, p2@Rpl21 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Gm10045_5end, CAGE_peak_2_at_Gm10095_5end, CAGE_peak_2_at_Gm10163_5end, CAGE_peak_2_at_Gm10240_5end, CAGE_peak_2_at_Gm11703_5end, CAGE_peak_2_at_Gm13370_5end, CAGE_peak_2_at_Gm13653_5end, CAGE_peak_2_at_Gm15682_5end, CAGE_peak_2_at_Gm4478_5end, CAGE_peak_2_at_Gm5445_5end, CAGE_peak_2_at_Gm8101_5end, CAGE_peak_2_at_LOC100505283_5end, CAGE_peak_2_at_LOC634339_5end, CAGE_peak_2_at_Rpl21_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2147 |
| Association with transcript: | -34bp_to_ENSMUST00000089785_5end |
| EntrezGene: | 100039601,100042650,100043184,100043348,100043498,100046290,100503563,100504174,100505283,19933,432725,545423,634339,666431 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 1.12e-39 | 70 |
| ectodermal cell | 7.52e-36 | 44 |
| neurectodermal cell | 7.52e-36 | 44 |
| neural cell | 1.86e-35 | 43 |
| electrically responsive cell | 5.28e-32 | 39 |
| electrically active cell | 5.28e-32 | 39 |
| somatic stem cell | 1.41e-28 | 91 |
| multi fate stem cell | 1.41e-28 | 91 |
| stem cell | 3.07e-28 | 97 |
| neuron | 2.44e-26 | 33 |
| neuronal stem cell | 2.44e-26 | 33 |
| neuroblast | 2.44e-26 | 33 |
| electrically signaling cell | 2.44e-26 | 33 |
| CNS neuron (sensu Vertebrata) | 6.97e-17 | 23 |
| neuroblast (sensu Vertebrata) | 6.97e-17 | 23 |
| autonomic neuron | 3.17e-10 | 9 |
| motile cell | 8.04e-10 | 54 |
| migratory neural crest cell | 1.52e-09 | 10 |
| neuron associated cell | 1.52e-09 | 10 |
| glial cell (sensu Vertebrata) | 1.52e-09 | 10 |
| neuron associated cell (sensu Vertebrata) | 1.52e-09 | 10 |
| glial cell | 1.52e-09 | 10 |
| glioblast | 1.52e-09 | 10 |
| glioblast (sensu Vertebrata) | 1.52e-09 | 10 |
| oligodendrocyte precursor cell | 1.33e-07 | 8 |
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 2.02e-14 | 75 |
| central nervous system | 6.00e-13 | 73 |
| peripheral nervous system | 3.41e-12 | 11 |
| autonomic nervous system | 3.17e-10 | 9 |
| ectoderm-derived structure | 2.51e-09 | 95 |
| ectoderm | 2.51e-09 | 95 |
| presumptive ectoderm | 2.51e-09 | 95 |
