FFCP PHASE1:Mm9::chr4:3502131..3502140,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=116940 | |EntrezGene=116940 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=829 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_ENSMUST00000132518_5end | |association_with_transcript=34bp_to_ENSMUST00000132518_5end | ||
|cluster_id=chr4:3502131..3502140,+ | |||
|description=CAGE_peak_6_at_Tgs1_5end | |description=CAGE_peak_6_at_Tgs1_5end | ||
|id=chr4:3502131..3502140,+ | |id=chr4:3502131..3502140,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,2.64e-12,25;CL:0000988,3.02e-12,32;CL:0002032,3.02e-12,32;CL:0000037,3.02e-12,32;CL:0000837,3.02e-12,32;CL:0000553,1.73e-10,6;CL:0000556,1.73e-10,6;CL:0000763,3.63e-10,16;CL:0000049,1.51e-08,19;CL:0000839,2.06e-08,13;CL:0002320,2.83e-08,46;CL:0000134,2.83e-08,46;CL:0000945,7.32e-08,1;CL:0000236,7.32e-08,1;CL:0000826,7.32e-08,1;CL:0000050,3.72e-07,9;CL:0000219,6.37e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.63e-10,16;UBERON:0002390,2.06e-08,45;UBERON:0003061,2.06e-08,45;UBERON:0002384,2.83e-08,46;UBERON:0002193,7.81e-08,48;UBERON:0002405,7.81e-08,48;UBERON:0001474,2.30e-07,22;UBERON:0004765,2.30e-07,22;UBERON:0001434,2.30e-07,22;UBERON:0000996,2.74e-07,1 | |||
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|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,2.25261955442667,1.87251621057595,0.34243593645101,0.159544317990673,0,0.174840804837995,0.666219523631325,0.607425802169478,0.699561878128147,3.94327706697797,3.83920414096069,2.97072756258621,0.17008658030214,0.198581902401771,0.783599367416806,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0.194429899074283,0,0,3.6912173332702,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0.153606533256243,0.263772575460388,0,0,0,0,0.15279824777681,0,0.569486723196412,0,0.151452386666368,0,0.579728977403356,0,0,0,0.649776417447669,0.896053774194671,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0,0.506719730950197,0,0.22836775943812,0.776813650941515,0,0,0,0.461230994512117,0,0.117588707135705,0.251333182659351,0,0.289198713839823,0,0.647067399789637,0.441683036920787,0,0,0,0.209446706813455,0,0.718890747035522,0.599902730993408,0.635351135365324,0.149790639404823,0,0,0,0,0.62336413367868,0.162241263067758,0.101839363850316,0.124406970610093,0.505445516867349,0.420883711772948,0.130120442962704,0,0.180062129805349,0.30140963567143,0.136072998302656,0.2562274405697,0.281105173679186,0,0.215567992932842,0.567318240503458,0.175951124163949,0,0.556094498451196,0.348252166522167,0.205782136407943,0.398068533636986,0.702213187313235,1.28673953557358,0.284163499395593,0.621377317606506,0.469052119962192,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0.536546802799238,0.350296027101508,0,0.164167464079095,0,0,0.439100230582101,0.268412837520744,0.420579897128254,0.617427674275707,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0,0.329397909448022,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.379335801906163,0.685491075658373,0,1.01825663922657,0.387904974335251,0.561086559122548,0.0632365371242573,0.147610147979602,0,0.616985819609003,0.296452627087149,0,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,0,0,0.486405680325106,0.274561413188081,1.43768206527355,0.372140947668503,0.624075346229121,0,0,0,0,0,0.488894929326078,0.169745085775188,0.234690248288502,0.335012514883631,0,0,0,0.221464689648775,0.318909537314974,0.163863314715738,0.345369963731791,0.289298117163023,4.52373851817817,0.54390568381871,0,1.10374698521893,0,0.117211686592203,0,0.252470927204373,0.315508219416257,0,0,0,0,0.566153061577665,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0.178065603667255,0.81443479676788,0.824850614862677,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0.532020700926821,0.356737635204141,0,0.304464949114599,0,0,0,0,0.484393280087717,0.0603129249281559,0,0,0,0,0.170870880797853,0.412773735926445,0.370389054739423,1.31857919903284,0.956859594047176,0.457556346413045,0.169978429993855,0.839708713941948,0.690999869022119,0,0.949007980743406,0,0.108005340821801,0.209088296014469,0.436725127492355,0,0.165306911450672,0,0,0,0,0.299033092087958,0.165458490457098,0.583353565032143,0.129159823477731,0.337912250981556,0.234714477291508,0,0.209718688851422,0,0,0,0.202725215290164,0.205421914329655,0.51968329191118,0.358053391334963,0.198681354781265,0.600977247599844,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.487289403698762,0,0,0.226730383615211,0,0.448569283047378,0.167884616364078,0.19318959403219,0.750729901804728,1.46521299413812,1.07184189539533,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0.415149390336707,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.192075457214608,0.229741875822453,0,0,0,0,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.526139422875686,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0.644613162144895,0.382576664137687,0,0 | ||
|short_description=p6@Tgs1 | |short_description=p6@Tgs1 | ||
}} | }} |
Latest revision as of 22:29, 26 September 2015
Short description: | p6@Tgs1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tgs1_5end |
Coexpression cluster: | MCL_coexpression_mm9:829 |
Association with transcript: | 34bp_to_ENSMUST00000132518_5end |
EntrezGene: | Tgs1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 2.64e-12 | 25 |
hematopoietic cell | 3.02e-12 | 32 |
hematopoietic oligopotent progenitor cell | 3.02e-12 | 32 |
hematopoietic stem cell | 3.02e-12 | 32 |
hematopoietic multipotent progenitor cell | 3.02e-12 | 32 |
megakaryocyte progenitor cell | 1.73e-10 | 6 |
megakaryocyte | 1.73e-10 | 6 |
myeloid cell | 3.63e-10 | 16 |
common myeloid progenitor | 1.51e-08 | 19 |
myeloid lineage restricted progenitor cell | 2.06e-08 | 13 |
connective tissue cell | 2.83e-08 | 46 |
mesenchymal cell | 2.83e-08 | 46 |
lymphocyte of B lineage | 7.32e-08 | 1 |
B cell | 7.32e-08 | 1 |
pro-B cell | 7.32e-08 | 1 |
megakaryocyte-erythroid progenitor cell | 3.72e-07 | 9 |
motile cell | 6.37e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.63e-10 | 16 |
hematopoietic system | 2.06e-08 | 45 |
blood island | 2.06e-08 | 45 |
connective tissue | 2.83e-08 | 46 |
hemolymphoid system | 7.81e-08 | 48 |
immune system | 7.81e-08 | 48 |
bone element | 2.30e-07 | 22 |
skeletal element | 2.30e-07 | 22 |
skeletal system | 2.30e-07 | 22 |
vagina | 2.74e-07 | 1 |