FFCP PHASE1:Mm9::chr6:146981050..146981069,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66532 | |EntrezGene=66532 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=306 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D7T1 | |UniProt=Q9D7T1 | ||
|association_with_transcript=0bp_to_ENSMUST00000036194,NM_025620,uc009esr.1_5end | |association_with_transcript=0bp_to_ENSMUST00000036194,NM_025620,uc009esr.1_5end | ||
|cluster_id=chr6:146981050..146981069,+ | |||
|description=CAGE_peak_1_at_Rep15_5end | |description=CAGE_peak_1_at_Rep15_5end | ||
|id=chr6:146981050..146981069,+ | |id=chr6:146981050..146981069,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.79e-10!9;CL:0002251!2.79e-10!9;CL:0000239!1.80e-07!6;CL:0000677!1.80e-07!6;CL:0000212!1.80e-07!6;CL:0000584!1.80e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.47e-09,9;CL:0002251,1.47e-09,9;CL:0000682,8.57e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.48e-25!59;UBERON:0000160!1.79e-21!43;UBERON:0000344!7.22e-18!15;UBERON:0001242!2.49e-15!13;UBERON:0000060!2.49e-15!13;UBERON:0001262!2.49e-15!13;UBERON:0004786!2.49e-15!13;UBERON:0004923!9.32e-11!24;UBERON:0003350!2.79e-10!9;UBERON:0004808!2.79e-10!9;UBERON:0001277!2.79e-10!9;UBERON:0000485!5.09e-08!11;UBERON:0001007!7.63e-07!128;UBERON:0001555!7.63e-07!128;UBERON:0007026!7.63e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.19e-46,47;UBERON:0000160,1.12e-41,31;UBERON:0000344,1.62e-20,15;UBERON:0001242,8.67e-17,13;UBERON:0001262,8.67e-17,13;UBERON:0004786,8.67e-17,13;UBERON:0001007,2.43e-16,116;UBERON:0001555,2.43e-16,116;UBERON:0007026,2.43e-16,116;UBERON:0004119,6.48e-16,118;UBERON:0000925,6.48e-16,118;UBERON:0006595,6.48e-16,118;UBERON:0004921,2.89e-14,114;UBERON:0004923,1.20e-11,24;UBERON:0003350,1.47e-09,9;UBERON:0004808,1.47e-09,9;UBERON:0001277,1.47e-09,9;UBERON:0002108,4.23e-09,4;UBERON:0000485,1.24e-07,11;UBERON:0000331,1.64e-07,3;UBERON:0002116,1.64e-07,3;UBERON:0001204,1.64e-07,3;UBERON:0001168,1.64e-07,3;UBERON:0000945,1.85e-07,16;UBERON:0010039,1.85e-07,16 | |||
|phase1_expression=0,2.79180326111489,0.454999239389536,0.90739263392049,1.50268718983904,33.2400958385542,33.4066076051602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3991286212418,21.3350631392468,5.16808767703518,15.5074318617267,16.3758136841276,34.9643091799728,20.9185007700743,23.7251646401176,0,0,0,2.3108129580102,5.31950865147176,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,6.39429726426736,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0.161766849947409,0,0,39.1422698558057,0,0,8.17462576667492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2254949704005,9.78467096655114,0,0,1.41754207454303,2.8235693447268,4.00280478920767,10.4624094361908,11.8632265386128,10.8701310117847,12.5667604400135,9.74886713001639,12.0877734013854,10.7858329038507,22.6944952368429,26.2866480695765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328281799490123,9.03590593552537,0,0,0,0,0,0,0,0,0,0,99.2857442735718,0,0,2.48412283890143,7.3180903605064,14.1935666435015,65.9486653821773,54.9645480573484,95.5409188241708,10.628427809927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0.222246727801615,0.412070114477788,0,0.505394423527595,0,0.754505365544305,0.37456602987953,0.384150914429216,0.287177344778066,0.952587382566147,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0.887379030796687,0.238436189947321,0.581385666529314,0.282328141245992,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.492522411877817,1.63692417267876,0.464810523557898,0.385813221962283,0,1.40358965067245,1.28922632428979,0.57386499620653,0,0 | |phase1_expression=0,2.79180326111489,0.454999239389536,0.90739263392049,1.50268718983904,33.2400958385542,33.4066076051602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3991286212418,21.3350631392468,5.16808767703518,15.5074318617267,16.3758136841276,34.9643091799728,20.9185007700743,23.7251646401176,0,0,0,2.3108129580102,5.31950865147176,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,6.39429726426736,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0.161766849947409,0,0,39.1422698558057,0,0,8.17462576667492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2254949704005,9.78467096655114,0,0,1.41754207454303,2.8235693447268,4.00280478920767,10.4624094361908,11.8632265386128,10.8701310117847,12.5667604400135,9.74886713001639,12.0877734013854,10.7858329038507,22.6944952368429,26.2866480695765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328281799490123,9.03590593552537,0,0,0,0,0,0,0,0,0,0,99.2857442735718,0,0,2.48412283890143,7.3180903605064,14.1935666435015,65.9486653821773,54.9645480573484,95.5409188241708,10.628427809927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0.222246727801615,0.412070114477788,0,0.505394423527595,0,0.754505365544305,0.37456602987953,0.384150914429216,0.287177344778066,0.952587382566147,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0.887379030796687,0.238436189947321,0.581385666529314,0.282328141245992,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.492522411877817,1.63692417267876,0.464810523557898,0.385813221962283,0,1.40358965067245,1.28922632428979,0.57386499620653,0,0 | ||
|short_description=p1@Rep15 | |short_description=p1@Rep15 | ||
}} | }} |
Latest revision as of 22:40, 26 September 2015
Short description: | p1@Rep15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rep15_5end |
Coexpression cluster: | MCL_coexpression_mm9:306 |
Association with transcript: | 0bp_to_ENSMUST00000036194, NM_025620, uc009esr.1_5end |
EntrezGene: | Rep15 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.47e-09 | 9 |
epithelial cell of alimentary canal | 1.47e-09 | 9 |
M cell of gut | 8.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.19e-46 | 47 |
intestine | 1.12e-41 | 31 |
mucosa | 1.62e-20 | 15 |
intestinal mucosa | 8.67e-17 | 13 |
wall of intestine | 8.67e-17 | 13 |
gastrointestinal system mucosa | 8.67e-17 | 13 |
digestive system | 2.43e-16 | 116 |
digestive tract | 2.43e-16 | 116 |
primitive gut | 2.43e-16 | 116 |
endoderm-derived structure | 6.48e-16 | 118 |
endoderm | 6.48e-16 | 118 |
presumptive endoderm | 6.48e-16 | 118 |
subdivision of digestive tract | 2.89e-14 | 114 |
organ component layer | 1.20e-11 | 24 |
epithelium of mucosa | 1.47e-09 | 9 |
gastrointestinal system epithelium | 1.47e-09 | 9 |
intestinal epithelium | 1.47e-09 | 9 |
small intestine | 4.23e-09 | 4 |
simple columnar epithelium | 1.24e-07 | 11 |
ileal mucosa | 1.64e-07 | 3 |
ileum | 1.64e-07 | 3 |
mucosa of small intestine | 1.64e-07 | 3 |
wall of small intestine | 1.64e-07 | 3 |
stomach | 1.85e-07 | 16 |
food storage organ | 1.85e-07 | 16 |