FFCP PHASE1:Mm9::chr6:17693582..17693593,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=64213|HGNC=|MCL_coexpression_id=15|UniProt=Q99M96|association_with_transcript=0bp_to_ENSMUST00000000674,ENSMUST00000077080,ENSMUST00000127181,ENSMUST00000144021,uc009azx.1,uc009azy.1_5end|description=CAGE_peak_19_at_St7_5end|id=chr6:17693582..17693593,+|ontology_enrichment_celltype=CL:0000050!6.00e-10!9;CL:0000553!4.45e-08!6;CL:0000556!4.45e-08!6;CL:0002027!3.83e-07!3;CL:0002006!3.83e-07!3;CL:0002024!3.83e-07!3|ontology_enrichment_celltype_v019_2=CL:0002027,6.12e-34,3;CL:0002006,6.12e-34,3;CL:0002024,6.12e-34,3;CL:0000553,2.19e-17,6;CL:0000556,2.19e-17,6;CL:0000050,7.86e-12,9;CL:0000839,2.18e-08,13;CL:0000763,6.35e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!1.65e-08!6;UBERON:0004457!1.65e-08!6;UBERON:0000042!1.65e-08!6;UBERON:0004854!1.65e-08!6;UBERON:0009034!1.65e-08!6;UBERON:0002095!1.65e-08!6;UBERON:0004782!1.65e-08!6;UBERON:0003281!1.65e-08!6;UBERON:0009664!1.65e-08!6;UBERON:0002296!1.65e-08!6;UBERON:0005602!1.65e-08!6;UBERON:0001179!1.65e-08!6;UBERON:0006293!1.65e-08!6;UBERON:0003887!8.95e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.83e-29,6;UBERON:0004457,2.83e-29,6;UBERON:0000042,2.83e-29,6;UBERON:0004854,2.83e-29,6;UBERON:0009034,2.83e-29,6;UBERON:0002095,2.83e-29,6;UBERON:0004782,2.83e-29,6;UBERON:0003281,2.83e-29,6;UBERON:0009664,2.83e-29,6;UBERON:0002296,2.83e-29,6;UBERON:0005602,2.83e-29,6;UBERON:0001179,2.83e-29,6;UBERON:0006293,2.83e-29,6;UBERON:0003887,8.48e-18,10;UBERON:0002390,5.72e-12,45;UBERON:0003061,5.72e-12,45;UBERON:0000945,2.65e-11,16;UBERON:0010039,2.65e-11,16;UBERON:0002193,3.21e-11,48;UBERON:0002405,3.21e-11,48;UBERON:0002075,1.39e-09,19;UBERON:0001474,1.91e-08,22;UBERON:0004765,1.91e-08,22;UBERON:0001434,1.91e-08,22;UBERON:0003081,5.32e-08,87;UBERON:0004923,1.15e-07,24;UBERON:0002371,6.35e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,3.23960427823721,3.49780939064073,0,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,1.76673214768315,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0.449724224769707,0.811440485554012,0.964708639009667,0,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,1.02522528478712,0,0.370389054739423,3.01389531207506,3.14396723758358,2.28778173206523,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0.294397840268795,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421|short_description=p19@St7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=64213 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=Q99M96 | |||
|association_with_transcript=0bp_to_ENSMUST00000000674,ENSMUST00000077080,ENSMUST00000127181,ENSMUST00000144021,uc009azx.1,uc009azy.1_5end | |||
|cluster_id=chr6:17693582..17693593,+ | |||
|description=CAGE_peak_19_at_St7_5end | |||
|id=chr6:17693582..17693593,+ | |||
|ontology_enrichment_celltype=CL:0000050!6.00e-10!9;CL:0000553!4.45e-08!6;CL:0000556!4.45e-08!6;CL:0002027!3.83e-07!3;CL:0002006!3.83e-07!3;CL:0002024!3.83e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,6.12e-34,3;CL:0002006,6.12e-34,3;CL:0002024,6.12e-34,3;CL:0000553,2.19e-17,6;CL:0000556,2.19e-17,6;CL:0000050,7.86e-12,9;CL:0000839,2.18e-08,13;CL:0000763,6.35e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.65e-08!6;UBERON:0004457!1.65e-08!6;UBERON:0000042!1.65e-08!6;UBERON:0004854!1.65e-08!6;UBERON:0009034!1.65e-08!6;UBERON:0002095!1.65e-08!6;UBERON:0004782!1.65e-08!6;UBERON:0003281!1.65e-08!6;UBERON:0009664!1.65e-08!6;UBERON:0002296!1.65e-08!6;UBERON:0005602!1.65e-08!6;UBERON:0001179!1.65e-08!6;UBERON:0006293!1.65e-08!6;UBERON:0003887!8.95e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.83e-29,6;UBERON:0004457,2.83e-29,6;UBERON:0000042,2.83e-29,6;UBERON:0004854,2.83e-29,6;UBERON:0009034,2.83e-29,6;UBERON:0002095,2.83e-29,6;UBERON:0004782,2.83e-29,6;UBERON:0003281,2.83e-29,6;UBERON:0009664,2.83e-29,6;UBERON:0002296,2.83e-29,6;UBERON:0005602,2.83e-29,6;UBERON:0001179,2.83e-29,6;UBERON:0006293,2.83e-29,6;UBERON:0003887,8.48e-18,10;UBERON:0002390,5.72e-12,45;UBERON:0003061,5.72e-12,45;UBERON:0000945,2.65e-11,16;UBERON:0010039,2.65e-11,16;UBERON:0002193,3.21e-11,48;UBERON:0002405,3.21e-11,48;UBERON:0002075,1.39e-09,19;UBERON:0001474,1.91e-08,22;UBERON:0004765,1.91e-08,22;UBERON:0001434,1.91e-08,22;UBERON:0003081,5.32e-08,87;UBERON:0004923,1.15e-07,24;UBERON:0002371,6.35e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,3.23960427823721,3.49780939064073,0,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,1.76673214768315,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0.449724224769707,0.811440485554012,0.964708639009667,0,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,1.02522528478712,0,0.370389054739423,3.01389531207506,3.14396723758358,2.28778173206523,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0.294397840268795,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p19@St7 | |||
}} |
Latest revision as of 23:40, 26 September 2015
Short description: | p19@St7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_St7_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 0bp_to_ENSMUST00000000674, ENSMUST00000077080, ENSMUST00000127181, ENSMUST00000144021, uc009azx.1, uc009azy.1_5end |
EntrezGene: | St7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 6.12e-34 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 6.12e-34 | 3 |
Kit-positive megakaryocyte progenitor cell | 6.12e-34 | 3 |
megakaryocyte progenitor cell | 2.19e-17 | 6 |
megakaryocyte | 2.19e-17 | 6 |
megakaryocyte-erythroid progenitor cell | 7.86e-12 | 9 |
myeloid lineage restricted progenitor cell | 2.18e-08 | 13 |
myeloid cell | 6.35e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.83e-29 | 6 |
cavity lining | 2.83e-29 | 6 |
serous membrane | 2.83e-29 | 6 |
gastrointestinal system mesentery | 2.83e-29 | 6 |
stomach region | 2.83e-29 | 6 |
mesentery | 2.83e-29 | 6 |
gastrointestinal system serosa | 2.83e-29 | 6 |
mesentery of stomach | 2.83e-29 | 6 |
gut mesentery | 2.83e-29 | 6 |
dorsal mesentery | 2.83e-29 | 6 |
dorsal mesogastrium | 2.83e-29 | 6 |
peritoneal cavity | 2.83e-29 | 6 |
spleen primordium | 2.83e-29 | 6 |
intraembryonic coelom | 8.48e-18 | 10 |
hematopoietic system | 5.72e-12 | 45 |
blood island | 5.72e-12 | 45 |
stomach | 2.65e-11 | 16 |
food storage organ | 2.65e-11 | 16 |
hemolymphoid system | 3.21e-11 | 48 |
immune system | 3.21e-11 | 48 |
viscus | 1.39e-09 | 19 |
bone element | 1.91e-08 | 22 |
skeletal element | 1.91e-08 | 22 |
skeletal system | 1.91e-08 | 22 |
lateral plate mesoderm | 5.32e-08 | 87 |
organ component layer | 1.15e-07 | 24 |
bone marrow | 6.35e-07 | 16 |