FFCP PHASE1:Mm9::chr1:37597825..37597837,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:37597825..37597837,-
|short_description=p3@Mgat4a
|description=CAGE_peak_3_at_Mgat4a_5end
|association_with_transcript=20bp_to_uc007arv.2_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=269181 | |EntrezGene=269181 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_uc007arv.2_5end | |||
|cluster_id=chr1:37597825..37597837,- | |||
|description=CAGE_peak_3_at_Mgat4a_5end | |||
|id=chr1:37597825..37597837,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.72e-07,9;CL:0002251,1.72e-07,9;CL:0002076,7.50e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.77e-20!43;UBERON:0005409!1.82e-19!59;UBERON:0004119!4.49e-13!130;UBERON:0000925!4.49e-13!130;UBERON:0006595!4.49e-13!130;UBERON:0001007!3.17e-12!128;UBERON:0001555!3.17e-12!128;UBERON:0007026!3.17e-12!128;UBERON:0004921!2.96e-11!126;UBERON:0004185!2.96e-11!126;UBERON:0000344!1.53e-09!15;UBERON:0001242!2.83e-08!13;UBERON:0000060!2.83e-08!13;UBERON:0001262!2.83e-08!13;UBERON:0004786!2.83e-08!13;UBERON:0004923!5.84e-08!24;UBERON:0002108!7.14e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.05e-20,31;UBERON:0005409,8.85e-17,47;UBERON:0000344,8.96e-12,15;UBERON:0004119,2.01e-11,118;UBERON:0000925,2.01e-11,118;UBERON:0006595,2.01e-11,118;UBERON:0001007,1.65e-10,116;UBERON:0001555,1.65e-10,116;UBERON:0007026,1.65e-10,116;UBERON:0001242,3.72e-10,13;UBERON:0001262,3.72e-10,13;UBERON:0004786,3.72e-10,13;UBERON:0004921,1.78e-09,114;UBERON:0004923,4.41e-08,24;UBERON:0003350,1.72e-07,9;UBERON:0004808,1.72e-07,9;UBERON:0001277,1.72e-07,9 | |||
|phase1_expression=0.160148847104794,10.4692622291808,7.73498706962211,39.0178832585811,31.0555352566735,7.55456723603504,7.70921713965235,1.29123323441576,2.53419699873,2.80877431586392,0.34243593645101,0.0797721589953364,3.25281386869291,2.27293046289393,0,0.202475267389826,0,1.10411757875383,2.05671650408608,2.12194825899015,0.510259740906419,2.6808556824239,1.82839852397255,13.2793710918528,13.3057383018959,7.46501553349526,6.46142994238612,5.817723282519,20.9025761402011,8.31699428207772,2.21730510655305,0,0,0,6.06588401477677,2.49351968037739,5.3084032628216,1.67412652294763,0,0,7.05877785637217,0.683045484958446,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0,0,0.194429899074283,0.419959264876088,0,3.35565212115473,2.90144856804538,3.36093799142464,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.662605622854841,0,0.287536413054709,0,1.10115880999389,0.638436690425939,1.53606533256243,0.131886287730194,0.182975287204819,0.52091337055676,1.11673199600552,0,0.763991238884051,0.883885756421003,0.711858403995515,0.559198337475902,0.227178579999552,0,1.73918693221007,0,0,0,0,0,2.94933282276679,0,0,0,0.14084341977668,0,0,0,11.2575341325831,10.6411143499541,12.6381111253696,3.08296475241462,0.776813650941515,0.29688427812965,0,0,0,0.452167921657868,0.352766121407114,0,2.71914464507811,1.44599356919912,0,1.13236794963186,1.32504911076236,0.484875253135222,3.72783522436244,0.292780797011547,0.41889341362691,10.4737392635522,0.359445373517761,0.599902730993408,0.254140454146129,0.299581278809645,1.37250180845588,0.879580464790051,1.21677024134594,1.27857728665165,0.41557608911912,1.1356888414743,0.509196819251581,0.497627882440372,0,0.631325567659422,0,0,0.360124259610698,0.30140963567143,0.612328492361951,0.2562274405697,0.843315521037559,0.776110112217047,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0.257347907114715,1.42081749697796,0,0.469052119962192,0.180062061461015,0,0.393528463494808,0,0.930135779001631,0.268273401399619,1.98501082024188,0.658239399653922,0.820837320395476,2.83740833410495,1.46199987425332,1.09775057645525,2.01309628140558,0.630869845692382,0.514523061896422,20.8163833279793,9.25576983322405,0.213288250535234,1.16118335930219,2.96395161040815,7.86565746031036,9.78463392917429,7.41879941838981,9.49058123089023,16.6345944271251,7.54005626400809,7.16243299348143,8.77338392036041,17.0775687644302,15.1296634912286,17.1261494998756,0.379335801906163,0.571242563048644,0,0.610953983535943,0.581857461502877,1.82353131714828,1.3279672796094,1.18088118383682,0.784993639206874,1.23397163921801,0,0,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0.50925170356284,0,0,0.274561413188081,0,0.372140947668503,0,0,0.358794827043824,0,0.554259570499814,0.189491411770485,0.325929952884052,0.339490171550376,0,0.502518772325447,0.714130922658041,0.975668239288994,0.315270288212382,0,0.478364305972461,0.327726629431476,0.172684981865896,0.433947175744535,0,0.54390568381871,0.491764273019036,1.10374698521893,0.321101179975584,1.05490517932983,0,2.01976741763498,0,0,0,0.238968797952552,0,0,0,0,0.395287777946524,0.321321316421807,0.141940085208269,0.178065603667255,0.325773918707152,0.989820737835213,2.65490276679926,1.94224508923985,4.23252979750651,3.20628635585027,3.2483208216885,4.91896236710284,5.68542244970086,8.72480950746013,11.4079161083111,3.79244109522979,0,5.15677716240934,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0.608929898229199,2.81606049676452,16.522901527378,0.441056796109924,0.98931751764888,0.161464426695906,1.44751019827574,0.954978752025092,1.14898629821543,17.1973693611612,0.927126510052548,0.341741761595705,0.619160603889667,0.185194527369712,0.565105371014073,0.27338845544205,0.915112692826091,1.35982743995084,0.559805809294632,1.24379976423981,0.954670618015114,0.158167996790568,1.42323626988794,2.59212817972323,2.29997125615916,2.40198820120795,2.96701562046606,2.47960367176008,2.35580347785627,5.31421390496351,15.5334828271731,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0.5208175393758,0.314578033277133,0,0.288030006257865,2.21207784439725,0.810900861160657,1.1298205288131,2.46849563657811,1.79026695667481,3.3775830312815,3.36547258655913,3.10148007066612,5.04832249740738,4.26758117267999,4.2346997757473,2.43644701849381,2.88635524920988,4.44132228289962,0.680191150845634,0.443971906748129,0.0897138566094757,1.67884616364078,2.89784391048286,3.00291960721891,1.09890974560359,3.85863082342319,12.5393026008841,0,0.460325236507177,1.14579102687879,1.20297227640581,0,1.5107877947794,1.35004500046361,0,0.906284817968409,0,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0,0.758091635291392,0.760437899670719,0.565879024158229,1.21733959710847,0.768301828858431,1.55075766180156,1.42888107384922,1.042958933503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|phase1_expression=0.160148847104794,10.4692622291808,7.73498706962211,39.0178832585811,31.0555352566735,7.55456723603504,7.70921713965235,1.29123323441576,2.53419699873,2.80877431586392,0.34243593645101,0.0797721589953364,3.25281386869291,2.27293046289393,0,0.202475267389826,0,1.10411757875383,2.05671650408608,2.12194825899015,0.510259740906419,2.6808556824239,1.82839852397255,13.2793710918528,13.3057383018959,7.46501553349526,6.46142994238612,5.817723282519,20.9025761402011,8.31699428207772,2.21730510655305,0,0,0,6.06588401477677,2.49351968037739,5.3084032628216,1.67412652294763,0,0,7.05877785637217,0.683045484958446,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0,0,0.194429899074283,0.419959264876088,0,3.35565212115473,2.90144856804538,3.36093799142464,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.662605622854841,0,0.287536413054709,0,1.10115880999389,0.638436690425939,1.53606533256243,0.131886287730194,0.182975287204819,0.52091337055676,1.11673199600552,0,0.763991238884051,0.883885756421003,0.711858403995515,0.559198337475902,0.227178579999552,0,1.73918693221007,0,0,0,0,0,2.94933282276679,0,0,0,0.14084341977668,0,0,0,11.2575341325831,10.6411143499541,12.6381111253696,3.08296475241462,0.776813650941515,0.29688427812965,0,0,0,0.452167921657868,0.352766121407114,0,2.71914464507811,1.44599356919912,0,1.13236794963186,1.32504911076236,0.484875253135222,3.72783522436244,0.292780797011547,0.41889341362691,10.4737392635522,0.359445373517761,0.599902730993408,0.254140454146129,0.299581278809645,1.37250180845588,0.879580464790051,1.21677024134594,1.27857728665165,0.41557608911912,1.1356888414743,0.509196819251581,0.497627882440372,0,0.631325567659422,0,0,0.360124259610698,0.30140963567143,0.612328492361951,0.2562274405697,0.843315521037559,0.776110112217047,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0.257347907114715,1.42081749697796,0,0.469052119962192,0.180062061461015,0,0.393528463494808,0,0.930135779001631,0.268273401399619,1.98501082024188,0.658239399653922,0.820837320395476,2.83740833410495,1.46199987425332,1.09775057645525,2.01309628140558,0.630869845692382,0.514523061896422,20.8163833279793,9.25576983322405,0.213288250535234,1.16118335930219,2.96395161040815,7.86565746031036,9.78463392917429,7.41879941838981,9.49058123089023,16.6345944271251,7.54005626400809,7.16243299348143,8.77338392036041,17.0775687644302,15.1296634912286,17.1261494998756,0.379335801906163,0.571242563048644,0,0.610953983535943,0.581857461502877,1.82353131714828,1.3279672796094,1.18088118383682,0.784993639206874,1.23397163921801,0,0,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0.50925170356284,0,0,0.274561413188081,0,0.372140947668503,0,0,0.358794827043824,0,0.554259570499814,0.189491411770485,0.325929952884052,0.339490171550376,0,0.502518772325447,0.714130922658041,0.975668239288994,0.315270288212382,0,0.478364305972461,0.327726629431476,0.172684981865896,0.433947175744535,0,0.54390568381871,0.491764273019036,1.10374698521893,0.321101179975584,1.05490517932983,0,2.01976741763498,0,0,0,0.238968797952552,0,0,0,0,0.395287777946524,0.321321316421807,0.141940085208269,0.178065603667255,0.325773918707152,0.989820737835213,2.65490276679926,1.94224508923985,4.23252979750651,3.20628635585027,3.2483208216885,4.91896236710284,5.68542244970086,8.72480950746013,11.4079161083111,3.79244109522979,0,5.15677716240934,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0.608929898229199,2.81606049676452,16.522901527378,0.441056796109924,0.98931751764888,0.161464426695906,1.44751019827574,0.954978752025092,1.14898629821543,17.1973693611612,0.927126510052548,0.341741761595705,0.619160603889667,0.185194527369712,0.565105371014073,0.27338845544205,0.915112692826091,1.35982743995084,0.559805809294632,1.24379976423981,0.954670618015114,0.158167996790568,1.42323626988794,2.59212817972323,2.29997125615916,2.40198820120795,2.96701562046606,2.47960367176008,2.35580347785627,5.31421390496351,15.5334828271731,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0.5208175393758,0.314578033277133,0,0.288030006257865,2.21207784439725,0.810900861160657,1.1298205288131,2.46849563657811,1.79026695667481,3.3775830312815,3.36547258655913,3.10148007066612,5.04832249740738,4.26758117267999,4.2346997757473,2.43644701849381,2.88635524920988,4.44132228289962,0.680191150845634,0.443971906748129,0.0897138566094757,1.67884616364078,2.89784391048286,3.00291960721891,1.09890974560359,3.85863082342319,12.5393026008841,0,0.460325236507177,1.14579102687879,1.20297227640581,0,1.5107877947794,1.35004500046361,0,0.906284817968409,0,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0,0.758091635291392,0.760437899670719,0.565879024158229,1.21733959710847,0.768301828858431,1.55075766180156,1.42888107384922,1.042958933503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| ||
|short_description=p3@Mgat4a | |||
}} | }} |
Latest revision as of 02:41, 27 September 2015
Short description: | p3@Mgat4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mgat4a_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_uc007arv.2_5end |
EntrezGene: | Mgat4a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.72e-07 | 9 |
epithelial cell of alimentary canal | 1.72e-07 | 9 |
endo-epithelial cell | 7.50e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.05e-20 | 31 |
gastrointestinal system | 8.85e-17 | 47 |
mucosa | 8.96e-12 | 15 |
endoderm-derived structure | 2.01e-11 | 118 |
endoderm | 2.01e-11 | 118 |
presumptive endoderm | 2.01e-11 | 118 |
digestive system | 1.65e-10 | 116 |
digestive tract | 1.65e-10 | 116 |
primitive gut | 1.65e-10 | 116 |
intestinal mucosa | 3.72e-10 | 13 |
wall of intestine | 3.72e-10 | 13 |
gastrointestinal system mucosa | 3.72e-10 | 13 |
subdivision of digestive tract | 1.78e-09 | 114 |
organ component layer | 4.41e-08 | 24 |
epithelium of mucosa | 1.72e-07 | 9 |
gastrointestinal system epithelium | 1.72e-07 | 9 |
intestinal epithelium | 1.72e-07 | 9 |