FFCP PHASE2:Mm9::chr11:120809807..120809847,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:80879 |HGNC= |MCL_coexpression_id=3 |TSSclassifier=NA |UniProt=uniprot:P57787,uniprot:Q3TMA0,uniprot:Q3UDP9 |associ...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=80879 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |MCL_coexpression_id=3 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=P57787,Q3TMA0,Q3UDP9 | ||
|association_with_transcript=9bp_to_NM_030696,uc007muw.1_5end | |association_with_transcript=9bp_to_NM_030696,uc007muw.1_5end | ||
|cluster_id=chr11:120809807..120809847,+ | |cluster_id=chr11:120809807..120809847,+ | ||
Latest revision as of 03:37, 27 September 2015
| Short description: | p2@Slc16a3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Slc16a3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3 |
| Association with transcript: | 9bp_to_NM_030696, uc007muw.1_5end |
| EntrezGene: | Slc16a3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@Slc16a3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| granulocyte monocyte progenitor cell | 6.17e-12 | 7 |
| common myeloid progenitor | 8.22e-09 | 19 |
| defensive cell | 8.16e-08 | 7 |
| monopoietic cell | 2.40e-07 | 4 |
| myeloid leukocyte | 2.40e-07 | 4 |
| phagocyte | 2.40e-07 | 4 |
| monocyte | 2.40e-07 | 4 |
| macrophage | 2.40e-07 | 4 |
| tissue-resident macrophage | 2.40e-07 | 4 |
| macrophage dendritic cell progenitor | 2.40e-07 | 4 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| bone element | 3.90e-13 | 22 |
| skeletal element | 3.90e-13 | 22 |
| skeletal system | 3.90e-13 | 22 |
| musculoskeletal system | 1.02e-12 | 32 |
| bone marrow | 1.48e-11 | 16 |
| spleen | 1.56e-09 | 6 |
| cavity lining | 1.56e-09 | 6 |
| serous membrane | 1.56e-09 | 6 |
| gastrointestinal system mesentery | 1.56e-09 | 6 |
| stomach region | 1.56e-09 | 6 |
Showing 1 to 10 of 21 entries
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system cancer | 7.28e-07 | 3 |
| muscle cancer | 7.28e-07 | 3 |
Showing 1 to 2 of 2 entries
