FFCP PHASE1:Mm9::chr3:104855866..104855905,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:104855866..104855905,-
|short_description=p2@Cttnbp2nl
|description=CAGE_peak_2_at_Cttnbp2nl_5end
|association_with_transcript=0bp_to_ENSMUST00000098763,NM...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=80281 | |EntrezGene=80281 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=Q99LJ0,Q922L8 | |UniProt=Q99LJ0,Q922L8 | ||
|association_with_transcript=0bp_to_ENSMUST00000098763,NM_001163332,NM_001163333,uc008quv.2,uc012cvn.1,uc012cvo.1_5end | |||
|cluster_id=chr3:104855866..104855905,- | |||
|description=CAGE_peak_2_at_Cttnbp2nl_5end | |||
|id=chr3:104855866..104855905,- | |||
|ontology_enrichment_celltype=CL:0000221!7.28e-16!44;CL:0000133!7.28e-16!44;CL:0002319!1.29e-15!43;CL:0000393!2.30e-15!39;CL:0000211!2.30e-15!39;CL:0000540!2.52e-15!33;CL:0000047!2.52e-15!33;CL:0000031!2.52e-15!33;CL:0000404!2.52e-15!33;CL:0000055!2.80e-15!50;CL:0000117!3.96e-12!23;CL:0000337!3.96e-12!23;CL:0002321!7.73e-10!70;CL:0000220!7.73e-10!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.86e-16,44;CL:0000133,4.86e-16,44;CL:0002319,8.73e-16,43;CL:0000393,9.48e-16,39;CL:0000211,9.48e-16,39;CL:0000540,1.04e-15,33;CL:0000047,1.04e-15,33;CL:0000031,1.04e-15,33;CL:0000404,1.04e-15,33;CL:0000117,2.01e-12,23;CL:0000337,2.01e-12,23;CL:0002321,4.99e-10,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.19e-10!75;UBERON:0001016!3.19e-10!75;UBERON:0001017!2.85e-09!73;UBERON:0005743!2.85e-09!73;UBERON:0004121!4.52e-09!102;UBERON:0000924!4.52e-09!102;UBERON:0006601!4.52e-09!102;UBERON:0000468!8.49e-09!333;UBERON:0000922!1.24e-08!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.53e-10,75;UBERON:0004121,2.32e-09,95;UBERON:0000924,2.32e-09,95;UBERON:0006601,2.32e-09,95;UBERON:0000922,2.72e-09,320;UBERON:0001017,4.12e-09,73 | |||
|phase1_expression=2.5623815536767,0.697950815278722,2.27499619694768,0.90739263392049,0.500895729946347,2.01455126294268,1.16806320297763,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,4.42225108785563,0,0,0.639969691173627,0.68822784320151,0,1.29228598847722,1.50829862880122,1.52018735565099,0.756090389279792,0.886922042621219,0,0,0,1.1554064790051,1.82858109894342,1.63335485009895,0,0,0,0,0,0,1.1330713617802,1.62203089951223,2.0190142737785,0.782391344348039,2.39827672018491,1.75748946187577,1.36100929351998,2.65974201088189,2.87505128729943,0,0,0,3.60163210450326,4.01146815914259,3.09403255366465,6.67644320836673,1.5869729378161,8.23980824558033,0.677689064138264,0.889294796111139,2.6996991518442,0,2.1314403448383,2.39680088414724,2.68952813725088,10.7837196800817,10.6654691282036,10.0955981448663,4.28476476605705,3.53389665522582,7.96190194897201,14.8560480078266,10.1114066527102,3.30347642998166,4.08599481872601,4.30098293117482,5.14356522147756,13.9976094711687,8.85552729946492,1.95428099300967,2.8138130501584,3.51435969886663,4.71405736757868,5.97961059356232,7.26957838718672,7.19398836665249,6.04572480854284,3.18850937571846,0.860423876981386,0,0,0,0.448026887097336,0.702222100658759,2.04516387093669,1.03914401841148,2.47337702157238,2.95771181531029,1.28326477414318,2.54805239706646,0,1.94841936910093,2.53359865475099,1.51657333504435,1.1418387971906,0.776813650941515,1.7813056687779,1.04091196059682,2.13125834818499,1.61430848079241,1.05505848386836,1.52865319276416,1.63366568728578,3.46072954828123,0.578397427679647,0,1.61766849947409,1.76673214768315,0.484875253135222,3.72783522436244,1.17112318804619,3.14170060220183,2.04365644166873,0,0,0.254140454146129,1.9472783122627,1.37250180845588,5.90575454930463,1.39059456153821,1.27857728665165,0.62336413367868,1.29793010454206,4.27725328171328,0.622034853050465,1.26361379216837,1.26265113531884,1.17108398666433,2.29902104433473,2.34080768746954,3.46621081022145,2.72145996605311,2.43416068541215,3.65436725782942,0.258703370739016,3.66465587985832,2.83659120251729,2.99116911078713,1.53437012699302,1.66828349535359,1.39300866608867,2.26360350048738,2.58744546864041,0.702213187313235,0,0,4.14251545071004,0.938104239924385,1.08037236876609,1.65721314909647,1.96764231747404,2.46827380619805,2.79040733700489,2.14618721119695,2.80236821681207,1.97471819896177,3.61168420974009,1.94565142910054,1.02339991197733,1.75640092232841,0.805238512562231,1.89260953707715,4.21908910755066,1.65209391491899,0.793351699990633,2.77274725695804,3.25131340604614,2.96395161040815,2.42020229548011,1.77902435075896,0.760902504450237,1.42358718463353,1.15289268306808,1.50801125280162,1.79060824837036,0.974820435595601,0.898819408654221,1.94524244887225,1.39398891278057,1.13800740571849,2.62771579002376,1.1270773567308,1.01825663922657,2.71533482034676,3.43665517462561,3.73095569033118,2.65698266363284,1.56998727841375,1.48076596706161,0,1.16791574001266,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0,0.486405680325106,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,1.01031551178845,0.717589654087649,0.482443521363367,3.8798169934987,3.60033682363921,2.60743962307241,2.03694102930226,3.28566347603903,3.1826188913945,3.33261097240419,7.41507861859636,3.31033802623001,5.3151525515706,6.85655505227195,3.60499292374624,5.69860440157455,5.78596234326046,6.03165135757089,5.4390568381871,0,0.551873492609465,1.28440471990234,1.75817529888305,1.3114795630134,1.51482556322624,3.47059041357882,5.0757036758563,4.95473814785438,2.15071918157297,4.01037613348309,5.66153061577665,4.04810701674894,3.79932615284705,1.97643888973262,3.53453448063988,2.83880170416537,3.38324646967785,3.4206261464251,2.47455184458803,0,0.971122544619926,1.81394134178851,0.188605079755898,0,0.614870295887855,1.03371317267288,1.09060118843252,1.06949213515416,0.948110273807448,0,0,3.06395645178409,1.98067203434441,1.55230420539305,3.00071849044229,1.77340233642274,2.31879462882692,1.97458824722545,0.304464949114599,1.64270195644597,2.96564899209348,1.54369878638473,3.13283880588812,1.61464426695906,2.77439454669517,2.02932984805332,0.984845398470368,0.291480836629851,2.59595422814714,0.170870880797853,2.88941615148511,1.11116716421827,0.376736914009382,0.683471138605126,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,1.90934123603023,3.63786392618306,2.84647253977588,1.83609079397062,3.13632444021703,2.62035076495413,2.83215127408124,2.31429676030941,2.35580347785627,2.33306951925227,0.621339313086926,2.25477175473676,1.94371509857172,1.98550188548517,4.66682852025714,2.45403664607689,2.36538575687089,1.76035857968631,3.77592716047455,1.46803082195995,1.93267296660805,3.74439008135225,0,1.41907650703115,1.23253148597793,0.909445760844565,1.07416017400489,0.79472541912506,0.240390899039938,0.443068581523732,0.504832249740738,0.533447646584999,0.302478555410522,0.682205165178267,0.384847366561318,0.350630706544707,1.13365191807606,4.217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|phase1_expression=2.5623815536767,0.697950815278722,2.27499619694768,0.90739263392049,0.500895729946347,2.01455126294268,1.16806320297763,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,4.42225108785563,0,0,0.639969691173627,0.68822784320151,0,1.29228598847722,1.50829862880122,1.52018735565099,0.756090389279792,0.886922042621219,0,0,0,1.1554064790051,1.82858109894342,1.63335485009895,0,0,0,0,0,0,1.1330713617802,1.62203089951223,2.0190142737785,0.782391344348039,2.39827672018491,1.75748946187577,1.36100929351998,2.65974201088189,2.87505128729943,0,0,0,3.60163210450326,4.01146815914259,3.09403255366465,6.67644320836673,1.5869729378161,8.23980824558033,0.677689064138264,0.889294796111139,2.6996991518442,0,2.1314403448383,2.39680088414724,2.68952813725088,10.7837196800817,10.6654691282036,10.0955981448663,4.28476476605705,3.53389665522582,7.96190194897201,14.8560480078266,10.1114066527102,3.30347642998166,4.08599481872601,4.30098293117482,5.14356522147756,13.9976094711687,8.85552729946492,1.95428099300967,2.8138130501584,3.51435969886663,4.71405736757868,5.97961059356232,7.26957838718672,7.19398836665249,6.04572480854284,3.18850937571846,0.860423876981386,0,0,0,0.448026887097336,0.702222100658759,2.04516387093669,1.03914401841148,2.47337702157238,2.95771181531029,1.28326477414318,2.54805239706646,0,1.94841936910093,2.53359865475099,1.51657333504435,1.1418387971906,0.776813650941515,1.7813056687779,1.04091196059682,2.13125834818499,1.61430848079241,1.05505848386836,1.52865319276416,1.63366568728578,3.46072954828123,0.578397427679647,0,1.61766849947409,1.76673214768315,0.484875253135222,3.72783522436244,1.17112318804619,3.14170060220183,2.04365644166873,0,0,0.254140454146129,1.9472783122627,1.37250180845588,5.90575454930463,1.39059456153821,1.27857728665165,0.62336413367868,1.29793010454206,4.27725328171328,0.622034853050465,1.26361379216837,1.26265113531884,1.17108398666433,2.29902104433473,2.34080768746954,3.46621081022145,2.72145996605311,2.43416068541215,3.65436725782942,0.258703370739016,3.66465587985832,2.83659120251729,2.99116911078713,1.53437012699302,1.66828349535359,1.39300866608867,2.26360350048738,2.58744546864041,0.702213187313235,0,0,4.14251545071004,0.938104239924385,1.08037236876609,1.65721314909647,1.96764231747404,2.46827380619805,2.79040733700489,2.14618721119695,2.80236821681207,1.97471819896177,3.61168420974009,1.94565142910054,1.02339991197733,1.75640092232841,0.805238512562231,1.89260953707715,4.21908910755066,1.65209391491899,0.793351699990633,2.77274725695804,3.25131340604614,2.96395161040815,2.42020229548011,1.77902435075896,0.760902504450237,1.42358718463353,1.15289268306808,1.50801125280162,1.79060824837036,0.974820435595601,0.898819408654221,1.94524244887225,1.39398891278057,1.13800740571849,2.62771579002376,1.1270773567308,1.01825663922657,2.71533482034676,3.43665517462561,3.73095569033118,2.65698266363284,1.56998727841375,1.48076596706161,0,1.16791574001266,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0,0.486405680325106,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,1.01031551178845,0.717589654087649,0.482443521363367,3.8798169934987,3.60033682363921,2.60743962307241,2.03694102930226,3.28566347603903,3.1826188913945,3.33261097240419,7.41507861859636,3.31033802623001,5.3151525515706,6.85655505227195,3.60499292374624,5.69860440157455,5.78596234326046,6.03165135757089,5.4390568381871,0,0.551873492609465,1.28440471990234,1.75817529888305,1.3114795630134,1.51482556322624,3.47059041357882,5.0757036758563,4.95473814785438,2.15071918157297,4.01037613348309,5.66153061577665,4.04810701674894,3.79932615284705,1.97643888973262,3.53453448063988,2.83880170416537,3.38324646967785,3.4206261464251,2.47455184458803,0,0.971122544619926,1.81394134178851,0.188605079755898,0,0.614870295887855,1.03371317267288,1.09060118843252,1.06949213515416,0.948110273807448,0,0,3.06395645178409,1.98067203434441,1.55230420539305,3.00071849044229,1.77340233642274,2.31879462882692,1.97458824722545,0.304464949114599,1.64270195644597,2.96564899209348,1.54369878638473,3.13283880588812,1.61464426695906,2.77439454669517,2.02932984805332,0.984845398470368,0.291480836629851,2.59595422814714,0.170870880797853,2.88941615148511,1.11116716421827,0.376736914009382,0.683471138605126,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,1.90934123603023,3.63786392618306,2.84647253977588,1.83609079397062,3.13632444021703,2.62035076495413,2.83215127408124,2.31429676030941,2.35580347785627,2.33306951925227,0.621339313086926,2.25477175473676,1.94371509857172,1.98550188548517,4.66682852025714,2.45403664607689,2.36538575687089,1.76035857968631,3.77592716047455,1.46803082195995,1.93267296660805,3.74439008135225,0,1.41907650703115,1.23253148597793,0.909445760844565,1.07416017400489,0.79472541912506,0.240390899039938,0.443068581523732,0.504832249740738,0.533447646584999,0.302478555410522,0.682205165178267,0.384847366561318,0.350630706544707,1.13365191807606,4.217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| ||
|short_description=p2@Cttnbp2nl | |||
}} | }} |
Latest revision as of 05:59, 27 September 2015
Short description: | p2@Cttnbp2nl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cttnbp2nl_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 0bp_to_ENSMUST00000098763, NM_001163332, NM_001163333, uc008quv.2, uc012cvn.1, uc012cvo.1_5end |
EntrezGene: | Cttnbp2nl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.86e-16 | 44 |
neurectodermal cell | 4.86e-16 | 44 |
neural cell | 8.73e-16 | 43 |
electrically responsive cell | 9.48e-16 | 39 |
electrically active cell | 9.48e-16 | 39 |
neuron | 1.04e-15 | 33 |
neuronal stem cell | 1.04e-15 | 33 |
neuroblast | 1.04e-15 | 33 |
electrically signaling cell | 1.04e-15 | 33 |
CNS neuron (sensu Vertebrata) | 2.01e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.01e-12 | 23 |
embryonic cell | 4.99e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.53e-10 | 75 |
ectoderm-derived structure | 2.32e-09 | 95 |
ectoderm | 2.32e-09 | 95 |
presumptive ectoderm | 2.32e-09 | 95 |
embryo | 2.72e-09 | 320 |
central nervous system | 4.12e-09 | 73 |