FFCP PHASE1:Mm9::chr1:62749956..62749973,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18187 | |EntrezGene=18187 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3274 | |MCL_coexpression_id=3274 | ||
|TSSclassifier=NA | |||
|UniProt=O35375,Q3U5I8,Q8QZY7,B1AT42,B1AT41,B1AT45,Q8BPZ0 | |UniProt=O35375,Q3U5I8,Q8QZY7,B1AT42,B1AT41,B1AT45,Q8BPZ0 | ||
|association_with_transcript=65bp_to_NM_001077403,NM_001077404,NM_001077405,NM_001077406,NM_001077407,NM_010939,uc007bfi.1,uc007bfj.1,uc007bfk.1,uc007bfl.1,uc007bfm.1,uc007bfn.1,uc007bfo.1_5end | |association_with_transcript=65bp_to_NM_001077403,NM_001077404,NM_001077405,NM_001077406,NM_001077407,NM_010939,uc007bfi.1,uc007bfj.1,uc007bfk.1,uc007bfl.1,uc007bfm.1,uc007bfn.1,uc007bfo.1_5end | ||
|cluster_id=chr1:62749956..62749973,+ | |||
|description=CAGE_peak_1_at_Nrp2_5end | |description=CAGE_peak_1_at_Nrp2_5end | ||
|id=chr1:62749956..62749973,+ | |id=chr1:62749956..62749973,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!7.68e-08!333;UBERON:0003102!1.08e-07!23;UBERON:0000479!5.60e-07!349 | |ontology_enrichment_uberon=UBERON:0000468!7.68e-08!333;UBERON:0003102!1.08e-07!23;UBERON:0000479!5.60e-07!349 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.85e-07,22;UBERON:0000479,7.27e-07,349 | |||
|phase1_expression=16.9757777931082,0,0.909998478779072,0,0,0.33575854382378,0.233612640595526,1.93684985162364,0,0.468129052643987,0,0,0,0,0.999329285446988,0.404950534779652,0,1.89277299214943,1.64537320326887,1.27316895539409,8.92954546586233,3.57447424323187,0.522399578277871,0.319984845586813,0.68822784320151,0,0.430761996159075,0.215471232685889,0,0.504060259519861,0.221730510655305,0,0,0,0,0.332469290716985,0,0.418531630736908,0,0,0,0,0,7.05022180663233,7.19776211658553,1.65192076945513,6.25913075478431,1.74420125104357,19.3323840806335,20.4151394027998,18.8981669194239,14.3752564364972,0.335565212115473,0,0,7.20326420900652,20.3438742356517,4.12537673821954,24.2779753031517,30.6814767977779,13.9442908771359,5.08266798103698,13.3394219416671,63.4429300683386,57.3542490288845,56.1279290807419,32.0572118254693,21.9004434033286,8.60623782160365,7.42532660824299,7.57169860864975,22.8520787523043,20.9825113904033,9.79926393719632,9.77623804386011,6.43453150627015,3.30347642998166,7.78892762319645,4.30098293117482,33.4991170834692,30.7398482504096,35.4221091978597,3.90856198601933,8.4414391504752,11.3070703354839,34.4715445004191,27.620106075026,29.4511124403975,34.152513193266,54.1092370364584,73.3357156415245,13.7667820317022,1.3599426674155,0.539703191637817,0.649776417447669,1.34408066129201,10.8142203501449,58.7984612894299,38.1885426766217,50.1742195804683,17.7462708918617,116.777094447029,81.5376767061266,49.7746692207332,3.24736561516821,3.29367825117628,2.52762222507392,5.36664234679582,30.0367945030719,17.2192881315197,17.0015620230813,20.3991870469135,15.4512383161559,15.3737093363675,10.4653949350777,10.8073268543521,9.88779870937496,41.7892141498545,31.8459798701955,68.5891443777015,72.2151765365487,85.8229198049343,29.8226817948995,2.63502717310392,1.67557365450764,8.43008282188352,0.479260498023681,0.599902730993408,0.508280908292259,6.29120685500255,1.83000241127451,7.03664371832041,7.30062144807561,6.13717097592793,7.68815764870372,9.73447578406546,11.2023300235348,72.4048568950741,2.0217820674694,7.36546495602659,23.6819206192121,16.0931473103431,14.2249082546226,17.7831685046144,12.7908618404496,13.5800543501941,17.8033276663485,11.6416516832557,127.185115830377,60.70305173387,39.0611495643966,24.9883134967435,26.6925359256574,33.7804601526502,36.217656007798,5.9710280045548,0,0,1.70498099637356,4.34964122324554,6.3322036194896,5.40186184383045,12.5474709860161,9.64144735562279,13.884040159864,16.9749779667798,13.1453966685813,10.2753501283109,11.0255099442032,33.3259952080563,29.1037026269622,30.5557973718945,26.3460138349261,23.0835040267839,13.0379768109759,84.1759729262547,0.991256348951394,6.08236303326152,62.0668809057531,62.7039014023184,42.5262622362908,38.7232367276818,28.9091456998331,28.3436182907713,13.7613427847908,22.8931547066375,29.4062194296315,28.6497319739257,29.4395771549871,13.4822911298133,19.2362864388478,18.1218558661474,8.15571974098251,10.5108631600951,7.88954149711563,7.53509913027663,7.95205197387266,6.38235961001899,17.0106284864252,17.1227771656338,14.9148791449306,11.3525390808056,9.78293669387591,4.50481785433454,7.86235980452812,1.57403478669398,3.04290182082754,1.68824011826692,3.56476192493988,3.45235364940973,4.86405680325106,3.84385978463314,1.43768206527355,10.7920874823866,5.30464044294753,5.80931419278357,4.84373016509163,4.3419916922703,16.0735275444946,23.1179522359991,13.0371981153621,11.5426658327128,11.7345124144251,24.7909261013887,24.0424077294874,21.8549685600735,27.5861502185834,22.589398344175,28.2234940523752,18.3526912481627,16.9231282228578,15.9113964439663,70.871903451458,106.605514028467,5.90117127622843,5.51873492609465,7.38532713943843,6.21221938938677,8.52461715958712,20.955086957963,15.4599027513966,14.8366722832723,8.61693590931196,7.16906393857656,3.56477878531831,2.83076530788832,12.5491317519217,9.9366991689846,12.2539211163422,6.42642632843614,27.2524963599876,11.7523298420388,8.1443479676788,21.7760562323747,2.65490276679926,11.6534705354391,14.511530734308,12.0707251043775,14.1744908582771,20.9055900601871,15.7641258832615,25.4473610634254,24.241821730161,17.3820216864699,5.27093042874994,8.25084345985495,6.12791290356818,36.7324631823873,47.7333543158364,51.6552254426137,50.3646263544057,49.2297936581715,42.4536473153472,29.8375650132307,7.97883807416615,4.02480934641258,5.07215315526412,28.525321758876,59.741837877485,69.6011153670919,61.4767571616153,65.6563598980245,16.0314460146418,12.4234952347041,3.41741761595705,17.7492706448371,11.6672552242918,1.88368457004691,1.77702496037333,4.11800711771741,0,0.279902904647316,0.552799895217695,5.72802370809068,50.7719269697722,34.5643094115643,39.2059387183139,29.6905380340546,30.789121488211,26.7031405841945,27.1103334779102,17.275892170946,20.3495508068115,3.10669656543463,0,5.98066184175915,3.30916980914195,3.69457257853691,3.61647505737647,4.39285926276023,2.58185925020659,3.3853140059427,1.99232754408851,1.93267296660805,3.45636007509439,1.26404448251271,10.7444364103787,5.34096977257102,2.5984164595559,3.58053391334963,2.98022032171897,1.9231271923195,3.10148007066612,2.22126189885925,1.37172251979,2.41982844328417,1.75424185331554,1.82802499116626,2.80504565235765,17.2315091547561,0.443971906748129,2.78112955489375,1.84673078000486,135.232715822533,23.8356743823001,14.4689783171139,10.7184189539533,5.01572104035363,3.95326289831947,3.68260189205742,1.71868654031819,1.54667864109319,0.685082519770642,1.5107877947794,0.675022500231806,2.70192721934532,1.35942722695261,4.65984280576638,19.7195960409936,63.0459299973629,33.6345203335644,32.5763000871514,20.9613162627982,19.1197248788015,29.7810615254164,24.1061016969506,33.3755977975488,40.4315538822076,31.9383917861702,31.6892253528608,31.5571880173504,34.3174816890099,33.4848784011225,32.387971007249,32.2158426126698,31.6371121560476,37.4998169731009,34.444547311449,30.8582327146874,29.993411240928,30.9967046931517,30.086708242892,28.4210328854298,31.2227903120286,30.1831155240075,29.2007379696006,29.0620803630144,18.5176949647054,31.5569148210303,34.3780643490716,27.8277109355389,30.6774945548213,42.0536411938888,50.711547321403,39.7683734357194,42.3295976475148,39.7879730703194,46.3241980150983,41.9680782472963 | |phase1_expression=16.9757777931082,0,0.909998478779072,0,0,0.33575854382378,0.233612640595526,1.93684985162364,0,0.468129052643987,0,0,0,0,0.999329285446988,0.404950534779652,0,1.89277299214943,1.64537320326887,1.27316895539409,8.92954546586233,3.57447424323187,0.522399578277871,0.319984845586813,0.68822784320151,0,0.430761996159075,0.215471232685889,0,0.504060259519861,0.221730510655305,0,0,0,0,0.332469290716985,0,0.418531630736908,0,0,0,0,0,7.05022180663233,7.19776211658553,1.65192076945513,6.25913075478431,1.74420125104357,19.3323840806335,20.4151394027998,18.8981669194239,14.3752564364972,0.335565212115473,0,0,7.20326420900652,20.3438742356517,4.12537673821954,24.2779753031517,30.6814767977779,13.9442908771359,5.08266798103698,13.3394219416671,63.4429300683386,57.3542490288845,56.1279290807419,32.0572118254693,21.9004434033286,8.60623782160365,7.42532660824299,7.57169860864975,22.8520787523043,20.9825113904033,9.79926393719632,9.77623804386011,6.43453150627015,3.30347642998166,7.78892762319645,4.30098293117482,33.4991170834692,30.7398482504096,35.4221091978597,3.90856198601933,8.4414391504752,11.3070703354839,34.4715445004191,27.620106075026,29.4511124403975,34.152513193266,54.1092370364584,73.3357156415245,13.7667820317022,1.3599426674155,0.539703191637817,0.649776417447669,1.34408066129201,10.8142203501449,58.7984612894299,38.1885426766217,50.1742195804683,17.7462708918617,116.777094447029,81.5376767061266,49.7746692207332,3.24736561516821,3.29367825117628,2.52762222507392,5.36664234679582,30.0367945030719,17.2192881315197,17.0015620230813,20.3991870469135,15.4512383161559,15.3737093363675,10.4653949350777,10.8073268543521,9.88779870937496,41.7892141498545,31.8459798701955,68.5891443777015,72.2151765365487,85.8229198049343,29.8226817948995,2.63502717310392,1.67557365450764,8.43008282188352,0.479260498023681,0.599902730993408,0.508280908292259,6.29120685500255,1.83000241127451,7.03664371832041,7.30062144807561,6.13717097592793,7.68815764870372,9.73447578406546,11.2023300235348,72.4048568950741,2.0217820674694,7.36546495602659,23.6819206192121,16.0931473103431,14.2249082546226,17.7831685046144,12.7908618404496,13.5800543501941,17.8033276663485,11.6416516832557,127.185115830377,60.70305173387,39.0611495643966,24.9883134967435,26.6925359256574,33.7804601526502,36.217656007798,5.9710280045548,0,0,1.70498099637356,4.34964122324554,6.3322036194896,5.40186184383045,12.5474709860161,9.64144735562279,13.884040159864,16.9749779667798,13.1453966685813,10.2753501283109,11.0255099442032,33.3259952080563,29.1037026269622,30.5557973718945,26.3460138349261,23.0835040267839,13.0379768109759,84.1759729262547,0.991256348951394,6.08236303326152,62.0668809057531,62.7039014023184,42.5262622362908,38.7232367276818,28.9091456998331,28.3436182907713,13.7613427847908,22.8931547066375,29.4062194296315,28.6497319739257,29.4395771549871,13.4822911298133,19.2362864388478,18.1218558661474,8.15571974098251,10.5108631600951,7.88954149711563,7.53509913027663,7.95205197387266,6.38235961001899,17.0106284864252,17.1227771656338,14.9148791449306,11.3525390808056,9.78293669387591,4.50481785433454,7.86235980452812,1.57403478669398,3.04290182082754,1.68824011826692,3.56476192493988,3.45235364940973,4.86405680325106,3.84385978463314,1.43768206527355,10.7920874823866,5.30464044294753,5.80931419278357,4.84373016509163,4.3419916922703,16.0735275444946,23.1179522359991,13.0371981153621,11.5426658327128,11.7345124144251,24.7909261013887,24.0424077294874,21.8549685600735,27.5861502185834,22.589398344175,28.2234940523752,18.3526912481627,16.9231282228578,15.9113964439663,70.871903451458,106.605514028467,5.90117127622843,5.51873492609465,7.38532713943843,6.21221938938677,8.52461715958712,20.955086957963,15.4599027513966,14.8366722832723,8.61693590931196,7.16906393857656,3.56477878531831,2.83076530788832,12.5491317519217,9.9366991689846,12.2539211163422,6.42642632843614,27.2524963599876,11.7523298420388,8.1443479676788,21.7760562323747,2.65490276679926,11.6534705354391,14.511530734308,12.0707251043775,14.1744908582771,20.9055900601871,15.7641258832615,25.4473610634254,24.241821730161,17.3820216864699,5.27093042874994,8.25084345985495,6.12791290356818,36.7324631823873,47.7333543158364,51.6552254426137,50.3646263544057,49.2297936581715,42.4536473153472,29.8375650132307,7.97883807416615,4.02480934641258,5.07215315526412,28.525321758876,59.741837877485,69.6011153670919,61.4767571616153,65.6563598980245,16.0314460146418,12.4234952347041,3.41741761595705,17.7492706448371,11.6672552242918,1.88368457004691,1.77702496037333,4.11800711771741,0,0.279902904647316,0.552799895217695,5.72802370809068,50.7719269697722,34.5643094115643,39.2059387183139,29.6905380340546,30.789121488211,26.7031405841945,27.1103334779102,17.275892170946,20.3495508068115,3.10669656543463,0,5.98066184175915,3.30916980914195,3.69457257853691,3.61647505737647,4.39285926276023,2.58185925020659,3.3853140059427,1.99232754408851,1.93267296660805,3.45636007509439,1.26404448251271,10.7444364103787,5.34096977257102,2.5984164595559,3.58053391334963,2.98022032171897,1.9231271923195,3.10148007066612,2.22126189885925,1.37172251979,2.41982844328417,1.75424185331554,1.82802499116626,2.80504565235765,17.2315091547561,0.443971906748129,2.78112955489375,1.84673078000486,135.232715822533,23.8356743823001,14.4689783171139,10.7184189539533,5.01572104035363,3.95326289831947,3.68260189205742,1.71868654031819,1.54667864109319,0.685082519770642,1.5107877947794,0.675022500231806,2.70192721934532,1.35942722695261,4.65984280576638,19.7195960409936,63.0459299973629,33.6345203335644,32.5763000871514,20.9613162627982,19.1197248788015,29.7810615254164,24.1061016969506,33.3755977975488,40.4315538822076,31.9383917861702,31.6892253528608,31.5571880173504,34.3174816890099,33.4848784011225,32.387971007249,32.2158426126698,31.6371121560476,37.4998169731009,34.444547311449,30.8582327146874,29.993411240928,30.9967046931517,30.086708242892,28.4210328854298,31.2227903120286,30.1831155240075,29.2007379696006,29.0620803630144,18.5176949647054,31.5569148210303,34.3780643490716,27.8277109355389,30.6774945548213,42.0536411938888,50.711547321403,39.7683734357194,42.3295976475148,39.7879730703194,46.3241980150983,41.9680782472963 | ||
|short_description=p1@Nrp2 | |short_description=p1@Nrp2 | ||
}} | }} |
Latest revision as of 07:20, 27 September 2015
Short description: | p1@Nrp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nrp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3274 |
Association with transcript: | 65bp_to_NM_001077403, NM_001077404, NM_001077405, NM_001077406, NM_001077407, NM_010939, uc007bfi.1, uc007bfj.1, uc007bfk.1, uc007bfl.1, uc007bfm.1, uc007bfn.1, uc007bfo.1_5end |
EntrezGene: | Nrp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 1.85e-07 | 22 |
tissue | 7.27e-07 | 349 |