FFCP PHASE1:Mm9::chr18:47528722..47528743,-: Difference between revisions
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{{FFCP|EntrezGene=20358|HGNC=|UniProt=|association_with_transcript=-198bp_to_ENSMUST00000151382_5end|description=CAGE_peak_6_at_Sema6a_5end|id=chr18:47528722..47528743,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!7.82e-10!333;UBERON:0000922!1.27e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0010708,5.39e-07,8;UBERON:0002102,7.44e-07,7;UBERON:0004710,7.44e-07,7;UBERON:0005419,7.44e-07,7;UBERON:0005417,7.44e-07,7;UBERON:0005729,7.44e-07,7|phase1_expression=0.480446541314382,0.348975407639361,0.909998478779072,0.60492842261366,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0,0,1.29228598847722,0,0.190023419456374,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.377690453926732,0.506884656097573,1.28482726513177,0.782391344348039,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,0,0,5.26022798234954,3.1739458756322,2.53532561402472,0,0,0,0,0,0.299600110518405,0.768436610643109,0.207379224616955,0.405017814995072,0.630974884054146,4.28476476605705,3.3130281142742,0.367472397644862,0.575072826109418,0,0,0.127687338085188,0.307213066512487,2.37395317914349,2.37867873366265,1.04182674111352,0.279182999001381,0,0.15279824777681,1.47314292736834,3.27454865837937,1.4911955666024,0.302904773332736,0.151143120213571,3.47837386442013,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,1.97180787687353,0,0,0,0.216491041011214,0,0,0.11418387971906,1.03575153458869,0,0.867426633830679,0.608930956624282,0,0.452167921657868,0.23517741427141,0.251333182659351,0.247194967734374,0.289198713839823,0,0.161766849947409,0,0,0,0,0.41889341362691,0.255457055208591,0,0,0,0.149790639404823,0,1.00523481690292,0.347648640384553,0.767146371990992,0.20778804455956,0.973447578406546,0.509196819251581,0.373220911830279,0,0,2.47228841629137,0.919608417733892,0.900310649026746,3.0140963567143,2.10913147369116,2.94661556655154,1.68663104207512,0.776110112217047,1.72454394346274,5.67318240503458,6.68614271823006,2.41115305670332,2.50242524303038,1.0447564995665,1.64625709126355,1.99034266818493,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0.787056926989615,0.617068451549513,0,0.268273401399619,0.350296027101508,0.493679549740441,1.14917224855367,1.4592385718254,1.02339991197733,1.97595103761946,1.74468344388483,0.210289948564127,1.64647379806855,0.330418782983798,0.264450566663544,2.34617075588757,2.09013004674395,1.15980715189884,0.80673409849337,1.77902435075896,0.760902504450237,0.949058123089023,0.329397909448022,0.251335208800269,1.1937388322469,0.974820435595601,0.898819408654221,0.216138049874694,0.597423819763102,1.13800740571849,2.17072173958485,4.50830942692322,1.22190796707189,2.13347735884388,0.911765658574141,0.316182685621286,0.295220295959204,0.31399745568275,0.246794327843601,0.592905254174298,0.333690211432188,0.982794975566015,0,0,0.482354319504834,0.25462585178142,0,0.486405680325106,0.274561413188081,1.43768206527355,0.744281895337007,1.24815069245824,0.757736633841335,0.358794827043824,0,1.10851914099963,1.89491411770485,0.488894929326078,1.01847051465113,0.469380496577004,0.335012514883631,0.952174563544055,0.975668239288994,1.7339865851681,1.32878813789265,1.11618338060241,1.80249646187312,1.38147985492716,0.867894351489069,0,0,0,0.275936746304732,0.481651769963376,0.35163505977661,0,1.00988370881749,0.315508219416257,0.390438744296638,0.646270193198397,0.716906393857656,0.445597348164788,1.13230612315533,0,0.584511715822624,0.790575555893047,0.642642632843614,0.567760340833074,0.534196811001766,0.81443479676788,0.989820737835213,0,1.21390318077491,1.209294227859,1.50884063804718,0.295301892880773,0.614870295887855,2.58428293168221,1.09060118843252,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,0,2.52085531643834,0.646793418913773,0.428674070063185,1.06404140185364,0.713475270408282,0.822745103010605,0.304464949114599,2.3467170806371,1.27099242518292,0.220528398054962,4.61681508236144,2.26050197374268,2.23157822234177,1.43246812803764,4.59594519286172,0.291480836629851,0.927126510052548,0,1.44470807574256,1.11116716421827,0.376736914009382,0.136694227721025,0,0,0,0,0,0.949007980743406,1.21991680276109,0.648032044930808,0.209088296014469,0.655087691238533,0.674321731924103,0.247960367176008,0,0.259229946583586,0.621339313086926,0,0.897099276263873,0,0.194451188344048,0.258319646955462,0.168956125490778,0.234714477291508,0.5208175393758,0,0,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0,0.680191150845634,1.10992976687032,1.79427713218951,2.51826924546118,0,1.68914227906064,1.28206136987086,0.214368379079066,0,0.564751842617067,3.22227665555024,1.14579102687879,1.20297227640581,0,0,0,0.45032120322422,0,0,1.66059756134683,3.19219898720825,2.04880326904961,1.21553358534147,1.67690530102386,0.367687016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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20358 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-198bp_to_ENSMUST00000151382_5end | |||
|cluster_id=chr18:47528722..47528743,- | |||
|description=CAGE_peak_6_at_Sema6a_5end | |||
|id=chr18:47528722..47528743,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!7.82e-10!333;UBERON:0000922!1.27e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010708,5.39e-07,8;UBERON:0002102,7.44e-07,7;UBERON:0004710,7.44e-07,7;UBERON:0005419,7.44e-07,7;UBERON:0005417,7.44e-07,7;UBERON:0005729,7.44e-07,7 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.909998478779072,0.60492842261366,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0,0,1.29228598847722,0,0.190023419456374,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.377690453926732,0.506884656097573,1.28482726513177,0.782391344348039,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,0,0,5.26022798234954,3.1739458756322,2.53532561402472,0,0,0,0,0,0.299600110518405,0.768436610643109,0.207379224616955,0.405017814995072,0.630974884054146,4.28476476605705,3.3130281142742,0.367472397644862,0.575072826109418,0,0,0.127687338085188,0.307213066512487,2.37395317914349,2.37867873366265,1.04182674111352,0.279182999001381,0,0.15279824777681,1.47314292736834,3.27454865837937,1.4911955666024,0.302904773332736,0.151143120213571,3.47837386442013,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,1.97180787687353,0,0,0,0.216491041011214,0,0,0.11418387971906,1.03575153458869,0,0.867426633830679,0.608930956624282,0,0.452167921657868,0.23517741427141,0.251333182659351,0.247194967734374,0.289198713839823,0,0.161766849947409,0,0,0,0,0.41889341362691,0.255457055208591,0,0,0,0.149790639404823,0,1.00523481690292,0.347648640384553,0.767146371990992,0.20778804455956,0.973447578406546,0.509196819251581,0.373220911830279,0,0,2.47228841629137,0.919608417733892,0.900310649026746,3.0140963567143,2.10913147369116,2.94661556655154,1.68663104207512,0.776110112217047,1.72454394346274,5.67318240503458,6.68614271823006,2.41115305670332,2.50242524303038,1.0447564995665,1.64625709126355,1.99034266818493,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0.787056926989615,0.617068451549513,0,0.268273401399619,0.350296027101508,0.493679549740441,1.14917224855367,1.4592385718254,1.02339991197733,1.97595103761946,1.74468344388483,0.210289948564127,1.64647379806855,0.330418782983798,0.264450566663544,2.34617075588757,2.09013004674395,1.15980715189884,0.80673409849337,1.77902435075896,0.760902504450237,0.949058123089023,0.329397909448022,0.251335208800269,1.1937388322469,0.974820435595601,0.898819408654221,0.216138049874694,0.597423819763102,1.13800740571849,2.17072173958485,4.50830942692322,1.22190796707189,2.13347735884388,0.911765658574141,0.316182685621286,0.295220295959204,0.31399745568275,0.246794327843601,0.592905254174298,0.333690211432188,0.982794975566015,0,0,0.482354319504834,0.25462585178142,0,0.486405680325106,0.274561413188081,1.43768206527355,0.744281895337007,1.24815069245824,0.757736633841335,0.358794827043824,0,1.10851914099963,1.89491411770485,0.488894929326078,1.01847051465113,0.469380496577004,0.335012514883631,0.952174563544055,0.975668239288994,1.7339865851681,1.32878813789265,1.11618338060241,1.80249646187312,1.38147985492716,0.867894351489069,0,0,0,0.275936746304732,0.481651769963376,0.35163505977661,0,1.00988370881749,0.315508219416257,0.390438744296638,0.646270193198397,0.716906393857656,0.445597348164788,1.13230612315533,0,0.584511715822624,0.790575555893047,0.642642632843614,0.567760340833074,0.534196811001766,0.81443479676788,0.989820737835213,0,1.21390318077491,1.209294227859,1.50884063804718,0.295301892880773,0.614870295887855,2.58428293168221,1.09060118843252,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,0,2.52085531643834,0.646793418913773,0.428674070063185,1.06404140185364,0.713475270408282,0.822745103010605,0.304464949114599,2.3467170806371,1.27099242518292,0.220528398054962,4.61681508236144,2.26050197374268,2.23157822234177,1.43246812803764,4.59594519286172,0.291480836629851,0.927126510052548,0,1.44470807574256,1.11116716421827,0.376736914009382,0.136694227721025,0,0,0,0,0,0.949007980743406,1.21991680276109,0.648032044930808,0.209088296014469,0.655087691238533,0.674321731924103,0.247960367176008,0,0.259229946583586,0.621339313086926,0,0.897099276263873,0,0.194451188344048,0.258319646955462,0.168956125490778,0.234714477291508,0.5208175393758,0,0,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0,0.680191150845634,1.10992976687032,1.79427713218951,2.51826924546118,0,1.68914227906064,1.28206136987086,0.214368379079066,0,0.564751842617067,3.22227665555024,1.14579102687879,1.20297227640581,0,0,0,0.45032120322422,0,0,1.66059756134683,3.19219898720825,2.04880326904961,1.21553358534147,1.67690530102386,0.367687016900028,1.11123363900808,0.618105171716683,1.92551525755089,0.505394423527595,0.760437899670719,1.32038438970253,0.468207537349412,1.15245274328765,1.14870937911227,1.42888107384922,1.39061191133827,1.54327376370964,0.824171801606613,0.735994600671987,1.02860775715625,0.887379030796687,1.1921809497366,1.45346416632329,1.41164070622996,1.18460451048347,0.914639864363863,0.789209134313529,0.271608227691724,0,1.30498519936592,1.37906275325789,0.409231043169689,1.08455788830176,0.578719832943424,1.24905288968973,0.701794825336225,1.71896843238639,0.765153328275374,0.220591419119515,0.927471342481686 | |||
|short_description=p6@Sema6a | |||
}} |
Latest revision as of 08:23, 27 September 2015
Short description: | p6@Sema6a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Sema6a_5end |
Coexpression cluster: | NA |
Association with transcript: | -198bp_to_ENSMUST00000151382_5end |
EntrezGene: | Sema6a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pectoral complex | 5.39e-07 | 8 |
forelimb | 7.44e-07 | 7 |
pectoral appendage | 7.44e-07 | 7 |
pectoral appendage bud | 7.44e-07 | 7 |
forelimb bud | 7.44e-07 | 7 |
forelimb/pectoral fin field | 7.44e-07 | 7 |