FFCP PHASE1:Mm9::chr18:56892865..56892881,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16906 | |EntrezGene=16906 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_uc008eyu.1_5end | |association_with_transcript=-15bp_to_uc008eyu.1_5end | ||
|cluster_id=chr18:56892865..56892881,+ | |||
|description=CAGE_peak_7_at_Lmnb1_5end | |description=CAGE_peak_7_at_Lmnb1_5end | ||
|id=chr18:56892865..56892881,+ | |id=chr18:56892865..56892881,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.06e-08,1;CL:0000236,2.06e-08,1;CL:0000826,2.06e-08,1;CL:0000355,4.11e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.98e-23,3;DOID:4045,3.98e-23,3;DOID:0050686,6.82e-12,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.11e-08,9;UBERON:0002036,4.11e-08,9;UBERON:0002385,4.11e-08,9;UBERON:0000486,4.11e-08,9;UBERON:0007503,4.11e-08,9;UBERON:0001015,4.11e-08,9;UBERON:0002329,4.11e-08,9;UBERON:0003082,4.11e-08,9;UBERON:0003059,4.11e-08,9;UBERON:0007282,4.11e-08,9;UBERON:0004290,4.11e-08,9;UBERON:0009618,4.11e-08,9;UBERON:0000383,2.37e-07,10;UBERON:0007524,9.96e-07,11;UBERON:0003077,9.96e-07,11;UBERON:0007285,9.96e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,0,0.0992909512008853,0,0.47997726838022,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,33.9010620896895,25.7840663692854,18.3233310390829,37.0585837459539,43.7149110373405,20.3914348273085,0,0,0,0,0,0,0,0,0,1.8456086666351,0,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,0,0,0.367472397644862,0.383381884072945,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,0.517875767294343,0,0.346970653532272,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,1.1981512450592,0.599902730993408,1.01656181658452,0,0,0.125654352112864,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0,0.229902104433473,0,0,0.0680364991513279,0,0,0.258703370739016,0.215567992932842,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0.51469581422943,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0.477937595905104,0,0.283076530788832,0.404810701674894,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0,0,0.164140899745061,0,0,0.512612642393558,0,0.185194527369712,0.188368457004691,0.546776910884101,0.457556346413045,3.90950388985867,3.49878630809145,4.56059913554598,0,0,0,0.216010681643603,0,0,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0,0.38983152295901,0,0,0,0,0,0.167884616364078,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0,0,0.17230640686684,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,0,0.0992909512008853,0,0.47997726838022,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,33.9010620896895,25.7840663692854,18.3233310390829,37.0585837459539,43.7149110373405,20.3914348273085,0,0,0,0,0,0,0,0,0,1.8456086666351,0,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,0,0,0.367472397644862,0.383381884072945,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,0.517875767294343,0,0.346970653532272,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,1.1981512450592,0.599902730993408,1.01656181658452,0,0,0.125654352112864,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0,0.229902104433473,0,0,0.0680364991513279,0,0,0.258703370739016,0.215567992932842,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0.51469581422943,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0.477937595905104,0,0.283076530788832,0.404810701674894,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0,0,0.164140899745061,0,0,0.512612642393558,0,0.185194527369712,0.188368457004691,0.546776910884101,0.457556346413045,3.90950388985867,3.49878630809145,4.56059913554598,0,0,0,0.216010681643603,0,0,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0,0.38983152295901,0,0,0,0,0,0.167884616364078,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0,0,0.17230640686684,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p7@Lmnb1 | |short_description=p7@Lmnb1 | ||
}} | }} |
Latest revision as of 12:14, 1 October 2015
Short description: | p7@Lmnb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Lmnb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -15bp_to_uc008eyu.1_5end |
EntrezGene: | Lmnb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.06e-08 | 1 |
B cell | 2.06e-08 | 1 |
pro-B cell | 2.06e-08 | 1 |
multi-potent skeletal muscle stem cell | 4.11e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.11e-08 | 9 |
striated muscle tissue | 4.11e-08 | 9 |
muscle tissue | 4.11e-08 | 9 |
multilaminar epithelium | 4.11e-08 | 9 |
epithelial vesicle | 4.11e-08 | 9 |
musculature | 4.11e-08 | 9 |
somite | 4.11e-08 | 9 |
myotome | 4.11e-08 | 9 |
presomitic mesoderm | 4.11e-08 | 9 |
presumptive segmental plate | 4.11e-08 | 9 |
dermomyotome | 4.11e-08 | 9 |
trunk paraxial mesoderm | 4.11e-08 | 9 |
musculature of body | 2.37e-07 | 10 |
dense mesenchyme tissue | 9.96e-07 | 11 |
paraxial mesoderm | 9.96e-07 | 11 |
presumptive paraxial mesoderm | 9.96e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.98e-23 | 3 |
muscle cancer | 3.98e-23 | 3 |
organ system cancer | 6.82e-12 | 6 |