FFCP PHASE1:Mm9::chr13:40955571..40955604,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14538 | |EntrezGene=14538 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q6T5E4 | |UniProt=Q6T5E4 | ||
|association_with_transcript=70bp_to_ENSMUST00000110191,uc007qel.1_5end | |association_with_transcript=70bp_to_ENSMUST00000110191,uc007qel.1_5end | ||
|cluster_id=chr13:40955571..40955604,+ | |||
|description=CAGE_peak_5_at_Gcnt2_5end | |description=CAGE_peak_5_at_Gcnt2_5end | ||
|id=chr13:40955571..40955604,+ | |id=chr13:40955571..40955604,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.58e-09!25;CL:0000223!3.46e-08!20;CL:0002563!3.71e-07!9;CL:0002251!3.71e-07!9 | |ontology_enrichment_celltype=CL:0000066!2.58e-09!25;CL:0000223!3.46e-08!20;CL:0002563!3.71e-07!9;CL:0002251!3.71e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.60e-15,25;CL:0000223,2.71e-13,20;CL:0002563,1.39e-10,9;CL:0002251,1.39e-10,9;CL:0000239,2.82e-10,6;CL:0000677,2.82e-10,6;CL:0000584,2.82e-10,6;CL:0000075,1.25e-08,7;CL:0002076,4.27e-08,15;CL:0000182,3.07e-07,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.43e-11!15;UBERON:0000160!2.71e-11!43;UBERON:0004923!1.21e-10!24;UBERON:0001242!4.51e-10!13;UBERON:0000060!4.51e-10!13;UBERON:0001262!4.51e-10!13;UBERON:0004786!4.51e-10!13;UBERON:0005409!4.55e-10!59;UBERON:0004119!9.31e-10!130;UBERON:0000925!9.31e-10!130;UBERON:0006595!9.31e-10!130;UBERON:0001007!3.04e-09!128;UBERON:0001555!3.04e-09!128;UBERON:0007026!3.04e-09!128;UBERON:0004921!2.48e-08!126;UBERON:0004185!2.48e-08!126;UBERON:0003350!3.71e-07!9;UBERON:0004808!3.71e-07!9;UBERON:0001277!3.71e-07!9 | |ontology_enrichment_uberon=UBERON:0000344!1.43e-11!15;UBERON:0000160!2.71e-11!43;UBERON:0004923!1.21e-10!24;UBERON:0001242!4.51e-10!13;UBERON:0000060!4.51e-10!13;UBERON:0001262!4.51e-10!13;UBERON:0004786!4.51e-10!13;UBERON:0005409!4.55e-10!59;UBERON:0004119!9.31e-10!130;UBERON:0000925!9.31e-10!130;UBERON:0006595!9.31e-10!130;UBERON:0001007!3.04e-09!128;UBERON:0001555!3.04e-09!128;UBERON:0007026!3.04e-09!128;UBERON:0004921!2.48e-08!126;UBERON:0004185!2.48e-08!126;UBERON:0003350!3.71e-07!9;UBERON:0004808!3.71e-07!9;UBERON:0001277!3.71e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.83e-28,31;UBERON:0000344,5.24e-19,15;UBERON:0005409,8.53e-17,47;UBERON:0001242,3.91e-16,13;UBERON:0001262,3.91e-16,13;UBERON:0004786,3.91e-16,13;UBERON:0001007,1.07e-14,116;UBERON:0001555,1.07e-14,116;UBERON:0007026,1.07e-14,116;UBERON:0004119,3.09e-14,118;UBERON:0000925,3.09e-14,118;UBERON:0006595,3.09e-14,118;UBERON:0004921,5.13e-13,114;UBERON:0004923,6.24e-12,24;UBERON:0003350,1.39e-10,9;UBERON:0004808,1.39e-10,9;UBERON:0001277,1.39e-10,9;UBERON:0000485,2.61e-08,11;UBERON:0002108,9.47e-07,4 | |||
|phase1_expression=0.160148847104794,22.3344260889191,12.739978702907,19.660173734944,31.0555352566735,9.06548068324205,7.2419918584613,0,0,0,0,0,0,0,0,0.404950534779652,0,0.157731082679119,0,0,0.425216450755349,0,0,11.0394771727451,12.6175104586944,13.7815671387605,15.0766698655676,14.0056301245828,11.9714754257516,6.30075324399827,17.0732493204585,0,0,0,1.73310971850765,0.498703936075477,3.67504841272264,0.837063261473815,2.3440060335714,2.09409497589519,0,1.36609096991689,0.485510353031154,0.125896817975577,0.304130793658544,0,0,0,0.219686182734472,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,8.69593466105033,6.0229671388697,9.51959867190851,2.15881276655127,3.24888208723835,3.13618820968135,1.26399978118577,0.170430322578058,0,0.35333957451034,0,0,0,0,1.08245520505607,0.760079596425296,1.01104889002957,2.39786147410026,2.07150306917737,0,0,0,0,0,0.23517741427141,0.251333182659351,5.43828929015623,0.86759614151947,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,9.70736809792647,5.27186547826049,1.19980546198682,3.17675567682662,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0.252722758433675,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,2.31613116403244,1.13665399758237,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0,0,0.486412857275134,0.146199987425332,0.219550115291051,0.268412837520744,0,0.102904612379284,10.5734010554815,8.72686869989696,0.426576501070468,0.464473343720877,0.38660238396628,1.81515172161008,2.89091456998331,4.75564065281398,3.79623249235609,5.76446341534038,6.03204501120647,5.76973768919337,8.18849165900304,4.49409704327111,3.8904848977445,3.58454291857861,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0.189709611372772,0.738050739898011,0.470996183524124,0.863780147452604,2.37162101669719,0.166845105716094,0,0,0.405720242777006,0.241177159752417,1.01850340712568,0.575392274901621,0.486405680325106,0.549122826376163,0,1.86070473834252,0.312037673114561,1.26289438973556,2.15276896226295,1.4473305640901,1.47802552133284,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0,0,0,0,1.14704320301017,0.690739927463582,0.867894351489069,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,1.03371317267288,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,0.469343416127421,0.847328283455281,0.441056796109924,0.65954501176592,0.161464426695906,0.301564624640779,0.238744688006273,0.492422699235184,2.91480836629851,0,0,0.206386867963223,0.555583582109135,0.188368457004691,0.820165366326151,0,4.41943917984024,6.9975726161829,4.83699908315483,0.954670618015114,0,0,0.216010681643603,0,0.655087691238533,0.269728692769641,0.247960367176008,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0.906921534460845,0.221985953374065,0,0,1.15913756419314,0.187682475451182,1.09890974560359,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.760437899670719,0.377252682772152,0.468207537349412,0.512201219238954,0.34461281373368,0,0.115884325944855,0.192909220463705,0,0,0.685738504770831,0.354951612318675,0.476872379894642,0.436039249896986,0.188218760830661,0.338458431566706,0.365855945745545,0.526139422875686,0.679020569229309,0,0.474540072496697,0.29551344712669,0,0.154936841185966,0,0,1.16965804222704,0.429742108096597,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.160148847104794,22.3344260889191,12.739978702907,19.660173734944,31.0555352566735,9.06548068324205,7.2419918584613,0,0,0,0,0,0,0,0,0.404950534779652,0,0.157731082679119,0,0,0.425216450755349,0,0,11.0394771727451,12.6175104586944,13.7815671387605,15.0766698655676,14.0056301245828,11.9714754257516,6.30075324399827,17.0732493204585,0,0,0,1.73310971850765,0.498703936075477,3.67504841272264,0.837063261473815,2.3440060335714,2.09409497589519,0,1.36609096991689,0.485510353031154,0.125896817975577,0.304130793658544,0,0,0,0.219686182734472,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,8.69593466105033,6.0229671388697,9.51959867190851,2.15881276655127,3.24888208723835,3.13618820968135,1.26399978118577,0.170430322578058,0,0.35333957451034,0,0,0,0,1.08245520505607,0.760079596425296,1.01104889002957,2.39786147410026,2.07150306917737,0,0,0,0,0,0.23517741427141,0.251333182659351,5.43828929015623,0.86759614151947,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,9.70736809792647,5.27186547826049,1.19980546198682,3.17675567682662,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0.252722758433675,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,2.31613116403244,1.13665399758237,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0,0,0.486412857275134,0.146199987425332,0.219550115291051,0.268412837520744,0,0.102904612379284,10.5734010554815,8.72686869989696,0.426576501070468,0.464473343720877,0.38660238396628,1.81515172161008,2.89091456998331,4.75564065281398,3.79623249235609,5.76446341534038,6.03204501120647,5.76973768919337,8.18849165900304,4.49409704327111,3.8904848977445,3.58454291857861,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0.189709611372772,0.738050739898011,0.470996183524124,0.863780147452604,2.37162101669719,0.166845105716094,0,0,0.405720242777006,0.241177159752417,1.01850340712568,0.575392274901621,0.486405680325106,0.549122826376163,0,1.86070473834252,0.312037673114561,1.26289438973556,2.15276896226295,1.4473305640901,1.47802552133284,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0,0,0,0,1.14704320301017,0.690739927463582,0.867894351489069,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,1.03371317267288,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,0.469343416127421,0.847328283455281,0.441056796109924,0.65954501176592,0.161464426695906,0.301564624640779,0.238744688006273,0.492422699235184,2.91480836629851,0,0,0.206386867963223,0.555583582109135,0.188368457004691,0.820165366326151,0,4.41943917984024,6.9975726161829,4.83699908315483,0.954670618015114,0,0,0.216010681643603,0,0.655087691238533,0.269728692769641,0.247960367176008,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0.906921534460845,0.221985953374065,0,0,1.15913756419314,0.187682475451182,1.09890974560359,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.760437899670719,0.377252682772152,0.468207537349412,0.512201219238954,0.34461281373368,0,0.115884325944855,0.192909220463705,0,0,0.685738504770831,0.354951612318675,0.476872379894642,0.436039249896986,0.188218760830661,0.338458431566706,0.365855945745545,0.526139422875686,0.679020569229309,0,0.474540072496697,0.29551344712669,0,0.154936841185966,0,0,1.16965804222704,0.429742108096597,0.191288332068843,0,0.231867835620421 | ||
|short_description=p5@Gcnt2 | |short_description=p5@Gcnt2 | ||
}} | }} |
Latest revision as of 14:21, 1 October 2015
Short description: | p5@Gcnt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gcnt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 70bp_to_ENSMUST00000110191, uc007qel.1_5end |
EntrezGene: | Gcnt2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.60e-15 | 25 |
endodermal cell | 2.71e-13 | 20 |
intestinal epithelial cell | 1.39e-10 | 9 |
epithelial cell of alimentary canal | 1.39e-10 | 9 |
brush border epithelial cell | 2.82e-10 | 6 |
gut absorptive cell | 2.82e-10 | 6 |
enterocyte | 2.82e-10 | 6 |
columnar/cuboidal epithelial cell | 1.25e-08 | 7 |
endo-epithelial cell | 4.27e-08 | 15 |
hepatocyte | 3.07e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.83e-28 | 31 |
mucosa | 5.24e-19 | 15 |
gastrointestinal system | 8.53e-17 | 47 |
intestinal mucosa | 3.91e-16 | 13 |
wall of intestine | 3.91e-16 | 13 |
gastrointestinal system mucosa | 3.91e-16 | 13 |
digestive system | 1.07e-14 | 116 |
digestive tract | 1.07e-14 | 116 |
primitive gut | 1.07e-14 | 116 |
endoderm-derived structure | 3.09e-14 | 118 |
endoderm | 3.09e-14 | 118 |
presumptive endoderm | 3.09e-14 | 118 |
subdivision of digestive tract | 5.13e-13 | 114 |
organ component layer | 6.24e-12 | 24 |
epithelium of mucosa | 1.39e-10 | 9 |
gastrointestinal system epithelium | 1.39e-10 | 9 |
intestinal epithelium | 1.39e-10 | 9 |
simple columnar epithelium | 2.61e-08 | 11 |
small intestine | 9.47e-07 | 4 |