FFCP PHASE1:Mm9::chr3:130320563..130320593,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71760 | |EntrezGene=71760 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=E9PYH3 | |UniProt=E9PYH3 | ||
|association_with_transcript=-17bp_to_ENSMUST00000163620_5end | |association_with_transcript=-17bp_to_ENSMUST00000163620_5end | ||
|cluster_id=chr3:130320563..130320593,+ | |||
|description=CAGE_peak_2_at_Agxt2l1_5end | |description=CAGE_peak_2_at_Agxt2l1_5end | ||
|id=chr3:130320563..130320593,+ | |id=chr3:130320563..130320593,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.07e-11,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.62e-12!22;UBERON:0007499!4.62e-12!22;UBERON:0006925!4.62e-12!22;UBERON:0009497!4.62e-12!22;UBERON:0000015!4.62e-12!22;UBERON:0002423!4.62e-12!22;UBERON:0006235!4.62e-12!22;UBERON:0008835!4.62e-12!22;UBERON:0003894!4.62e-12!22;UBERON:0004161!4.62e-12!22;UBERON:0008836!4.62e-12!22;UBERON:0009854!2.58e-11!23;UBERON:0009856!2.58e-11!23;UBERON:0005172!8.94e-11!49;UBERON:0005173!8.94e-11!49;UBERON:0002417!8.94e-11!49;UBERON:0000916!8.94e-11!49;UBERON:0002365!5.23e-10!25;UBERON:0002330!5.23e-10!25 | |ontology_enrichment_uberon=UBERON:0002107!4.62e-12!22;UBERON:0007499!4.62e-12!22;UBERON:0006925!4.62e-12!22;UBERON:0009497!4.62e-12!22;UBERON:0000015!4.62e-12!22;UBERON:0002423!4.62e-12!22;UBERON:0006235!4.62e-12!22;UBERON:0008835!4.62e-12!22;UBERON:0003894!4.62e-12!22;UBERON:0004161!4.62e-12!22;UBERON:0008836!4.62e-12!22;UBERON:0009854!2.58e-11!23;UBERON:0009856!2.58e-11!23;UBERON:0005172!8.94e-11!49;UBERON:0005173!8.94e-11!49;UBERON:0002417!8.94e-11!49;UBERON:0000916!8.94e-11!49;UBERON:0002365!5.23e-10!25;UBERON:0002330!5.23e-10!25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.07e-33,22;UBERON:0007499,3.07e-33,22;UBERON:0006925,3.07e-33,22;UBERON:0009497,3.07e-33,22;UBERON:0000015,3.07e-33,22;UBERON:0002423,3.07e-33,22;UBERON:0006235,3.07e-33,22;UBERON:0008835,3.07e-33,22;UBERON:0003894,3.07e-33,22;UBERON:0004161,3.07e-33,22;UBERON:0008836,3.07e-33,22;UBERON:0009854,1.16e-31,23;UBERON:0009856,1.16e-31,23;UBERON:0002365,6.90e-29,25;UBERON:0002330,6.90e-29,25;UBERON:0005172,2.31e-24,49;UBERON:0005173,2.31e-24,49;UBERON:0002417,2.31e-24,49;UBERON:0000916,2.31e-24,49;UBERON:0003104,8.45e-19,61;UBERON:0009142,8.45e-19,61;UBERON:0009569,4.46e-17,66;UBERON:0005177,3.74e-15,79;UBERON:0005256,1.09e-14,45;UBERON:0003914,6.19e-14,47;UBERON:0002100,8.45e-13,90;UBERON:0003929,1.84e-11,55;UBERON:0002368,2.97e-10,60;UBERON:0000949,3.13e-09,72;UBERON:0002530,3.14e-09,65;UBERON:0000490,4.81e-09,66;UBERON:0005911,1.61e-08,69;UBERON:0001041,6.19e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,1.14014051673824,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0,0,0,0,0.279182999001381,0.56276261003168,0.61119299110724,0,0,0,0,0,0,18.0689014166091,2.03991400112325,22.1278308571505,22.0923981932207,25.9855594516455,5.75822122540183,0,0,0,0,0,0,0,0,0,0,5.1382745873577,0,0,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,1.25668024088073,0,0,0,0,0.449371918214468,0.457500602818626,0,0.173824320192276,0.767146371990992,1.0389402227978,0.324482526135515,0,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0.502670417600539,0,0,0,0,0,0,0,0,0.407302655690628,0.581857461502877,1.68325967736765,1.58091342810643,2.36176236767363,2.82597710114475,3.82531208157582,12.7474629647474,0,0,0,0,0,0,3.45235364940973,8.91743747262695,9.88421087477093,4.31304619582064,6.32639611036456,4.99260276983297,5.80931419278357,14.351793081753,30.8763853672555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,1.03371317267288,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.269728692769641,0.661227645802687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0.377252682772152,0.187283014939765,0.0640251524048693,0.229741875822453,0.476293691283074,0.347652977834566,0,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0.188218760830661,0,0,0,0,0,0.237270036248348,0.0985044823755635,0,0.464810523557898,0.192906610981141,0,0.701794825336225,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,1.14014051673824,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0,0,0,0,0.279182999001381,0.56276261003168,0.61119299110724,0,0,0,0,0,0,18.0689014166091,2.03991400112325,22.1278308571505,22.0923981932207,25.9855594516455,5.75822122540183,0,0,0,0,0,0,0,0,0,0,5.1382745873577,0,0,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,1.25668024088073,0,0,0,0,0.449371918214468,0.457500602818626,0,0.173824320192276,0.767146371990992,1.0389402227978,0.324482526135515,0,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0.502670417600539,0,0,0,0,0,0,0,0,0.407302655690628,0.581857461502877,1.68325967736765,1.58091342810643,2.36176236767363,2.82597710114475,3.82531208157582,12.7474629647474,0,0,0,0,0,0,3.45235364940973,8.91743747262695,9.88421087477093,4.31304619582064,6.32639611036456,4.99260276983297,5.80931419278357,14.351793081753,30.8763853672555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,1.03371317267288,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.269728692769641,0.661227645802687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0.377252682772152,0.187283014939765,0.0640251524048693,0.229741875822453,0.476293691283074,0.347652977834566,0,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0.188218760830661,0,0,0,0,0,0.237270036248348,0.0985044823755635,0,0.464810523557898,0.192906610981141,0,0.701794825336225,0.429742108096597,0,0,0 | ||
|short_description=p2@Agxt2l1 | |short_description=p2@Agxt2l1 | ||
}} | }} |
Latest revision as of 14:44, 1 October 2015
Short description: | p2@Agxt2l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Agxt2l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | -17bp_to_ENSMUST00000163620_5end |
EntrezGene: | Agxt2l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.07e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 3.07e-33 | 22 |
epithelial sac | 3.07e-33 | 22 |
digestive gland | 3.07e-33 | 22 |
epithelium of foregut-midgut junction | 3.07e-33 | 22 |
anatomical boundary | 3.07e-33 | 22 |
hepatobiliary system | 3.07e-33 | 22 |
foregut-midgut junction | 3.07e-33 | 22 |
hepatic diverticulum | 3.07e-33 | 22 |
liver primordium | 3.07e-33 | 22 |
septum transversum | 3.07e-33 | 22 |
liver bud | 3.07e-33 | 22 |
digestive tract diverticulum | 1.16e-31 | 23 |
sac | 1.16e-31 | 23 |
exocrine gland | 6.90e-29 | 25 |
exocrine system | 6.90e-29 | 25 |
abdomen element | 2.31e-24 | 49 |
abdominal segment element | 2.31e-24 | 49 |
abdominal segment of trunk | 2.31e-24 | 49 |
abdomen | 2.31e-24 | 49 |
mesenchyme | 8.45e-19 | 61 |
entire embryonic mesenchyme | 8.45e-19 | 61 |
subdivision of trunk | 4.46e-17 | 66 |
trunk region element | 3.74e-15 | 79 |
trunk mesenchyme | 1.09e-14 | 45 |
epithelial tube | 6.19e-14 | 47 |
trunk | 8.45e-13 | 90 |
gut epithelium | 1.84e-11 | 55 |
endocrine gland | 2.97e-10 | 60 |
endocrine system | 3.13e-09 | 72 |
gland | 3.14e-09 | 65 |
unilaminar epithelium | 4.81e-09 | 66 |
endo-epithelium | 1.61e-08 | 69 |
foregut | 6.19e-07 | 80 |