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FFCP PHASE1:Mm9::chr13:46822932..46822957,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=218210
|EntrezGene=218210
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=E9Q3G8,Q3V3W1,Q8BRF6,Q80WR0
|UniProt=E9Q3G8,Q3V3W1,Q8BRF6,Q80WR0
|association_with_transcript=260bp_to_ENSMUST00000021803,NM_175749,uc007qhj.2_5end
|association_with_transcript=260bp_to_ENSMUST00000021803,NM_175749,uc007qhj.2_5end
|cluster_id=chr13:46822932..46822957,-
|description=CAGE_peak_5_at_Nup153_5end
|description=CAGE_peak_5_at_Nup153_5end
|id=chr13:46822932..46822957,-
|id=chr13:46822932..46822957,-
|ontology_enrichment_celltype=CL:0000988!5.27e-07!32;CL:0002032!5.27e-07!32;CL:0000037!5.27e-07!32;CL:0000566!5.27e-07!32;CL:0000837!5.27e-07!32;CL:0000791!6.54e-07!9;CL:0000789!6.54e-07!9;CL:0002420!6.54e-07!9;CL:0002419!6.54e-07!9;CL:0000790!6.54e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000988,1.31e-22,32;CL:0002032,1.31e-22,32;CL:0000037,1.31e-22,32;CL:0000837,1.31e-22,32;CL:0000791,6.37e-17,9;CL:0000789,6.37e-17,9;CL:0002420,6.37e-17,9;CL:0002419,6.37e-17,9;CL:0000790,6.37e-17,9;CL:0002031,8.64e-17,25;CL:0000624,5.37e-15,8;CL:0000838,6.22e-15,12;CL:0002320,5.24e-14,46;CL:0000134,5.24e-14,46;CL:0000542,1.31e-13,13;CL:0000051,1.31e-13,13;CL:0000084,1.74e-13,11;CL:0000827,1.74e-13,11;CL:0000738,5.45e-12,17;CL:0002087,5.45e-12,17;CL:0000893,1.14e-11,6;CL:0002489,1.14e-11,6;CL:0000898,1.14e-11,6;CL:0000809,1.14e-11,6;CL:0000810,1.14e-11,6;CL:0000895,1.14e-11,6;CL:0000808,1.14e-11,6;CL:0000894,1.14e-11,6;CL:0000806,1.14e-11,6;CL:0000807,1.14e-11,6;CL:0000805,1.14e-11,6;CL:0002425,1.14e-11,6;CL:0002436,1.14e-11,6;CL:0002427,1.14e-11,6;CL:0002428,1.14e-11,6;CL:0002429,1.14e-11,6;CL:0002433,1.14e-11,6;CL:0002431,1.14e-11,6;CL:0002432,1.14e-11,6;CL:0000219,4.02e-11,54;CL:0000049,1.65e-10,19;CL:0000763,1.67e-08,16;CL:0000553,2.76e-08,6;CL:0000556,2.76e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!2.82e-08!48;UBERON:0002390!5.10e-08!45;UBERON:0003061!5.10e-08!45
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.24e-14,46;UBERON:0002193,1.82e-11,48;UBERON:0002405,1.82e-11,48;UBERON:0002390,5.14e-11,45;UBERON:0003061,5.14e-11,45;UBERON:0002371,1.67e-08,16
|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,1.93684985162364,1.68946466582,2.34064526321993,1.88339765048055,1.59544317990673,2.05440875917447,1.22388563386596,0.666219523631325,1.01237633694913,2.09868563438444,2.68142840554502,1.7824876368746,3.81950686618227,8.50432901510698,0.595745707205312,0,0.319984845586813,0.22940928106717,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0.288851619751275,0.664938581433969,0.612508068787107,0,0,1.0470474879476,0.588231488031014,0,0.485510353031154,0,0.101376931219515,0,0,0,0.219686182734472,0.194429899074283,0.279972843250725,0,1.34226084846189,1.45072428402269,3.02484419228218,0.257259436035947,0.286533439938757,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0,0,0.220868540951614,0.489963196859816,0.0958454710182364,0,0,0.510749352340751,0.46081959976873,0.263772575460388,0,0,0.279182999001381,0.56276261003168,0,1.17851434189467,0.569486723196412,0,0.530083353332288,0.453429360640713,0,0,0,0,0,0.448026887097336,1.12355536105401,0.511290967734173,0.519572009205738,0.35333957451034,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0,1.59857431606684,3.10725460376606,0.148442139064825,0.346970653532272,0,0,0,0.470354828542819,0,0.741584903203122,0.144599356919912,0.884610551949874,0.808834249737046,0.883366073841574,0.969750506270444,0,0,0,0.510914110417183,1.67741174308288,0,1.90605340609597,0,0.457500602818626,1.38219787324151,0.347648640384553,0,0,0,1.01839363850316,0.373220911830279,0.505445516867349,0,0.390361328888111,0,0.360124259610698,0.150704817835715,0.476255494059295,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0.351902248327898,0.657587197282725,0.834141747676794,0.348252166522167,0,0,2.80885274925294,1.54408744268829,1.42081749697796,0,0.234526059981096,0,0.473489471170421,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0,0,0.219550115291051,0.134206418760372,0.420579897128254,0.514523061896422,0,0.264450566663544,0,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.58489226135736,1.79763881730844,0.648414149624083,0.597423819763102,0.569003702859245,0.456994050438915,0,0.407302655690628,0,0.280543279561274,0.505892296994058,0.295220295959204,0.156998727841375,0.246794327843601,0.296452627087149,0.166845105716094,1.17935397067922,0.449724224769707,1.01430060694251,0.964708639009667,1.01850340712568,0.287696137450811,0.810676133875177,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0,0,0.814824882210129,0.169745085775188,0.469380496577004,0.502518772325447,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.518054945597687,0.578596234326046,1.50791283939272,0.54390568381871,0.491764273019036,0.275936746304732,0.160550589987792,0.234423373184406,0.327869890753351,0.252470927204373,0,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0,0,0.790575555893047,0.321321316421807,0.283880170416537,0,0.488660878060728,0.329940245945071,0,0.485561272309963,0,0.188605079755898,0.885905678642318,0,0.516856586336442,0,0,0,2.10837217149998,1.03135543248187,0,0.18006109403131,0,0.643011105094777,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0.441056796109924,0,0.161464426695906,0.301564624640779,0.119372344003136,0,0.582961673259701,0,1.36696704638282,0.82554747185289,0.370389054739423,1.13021074202815,1.6403307326523,1.14389086603261,0.509935289981566,1.11961161858926,1.10559979043539,0,0.474503990371703,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.539457385539283,0.330613822901344,0.785267825952089,0.388844919875379,0,67.0794597034186,0.149516546043979,0,0.777804753376191,0.387479470433193,0.337912250981556,0.821500670520278,0.5208175393758,1.04859344425711,12.3207901621263,22.7543704943714,0.316011120628178,0.202725215290164,0.410843828659309,0.649604114888975,0.716106782669926,0.39736270956253,0.841368146639782,0.738447635872886,0.302899349844443,0.457240839929999,0.705783295957884,0.877120926657772,0.481059208201647,0.818138315270983,0.453460767230423,0.221985953374065,0.538283139656854,0.335769232728157,0,0.375364950902364,0.183151624267265,0.214368379079066,0,1.12950368523413,1.84130094602871,0,0.859265911718438,1.37016503954128,0.755393897389701,0,0.45032120322422,0,0.51776031175182,0.207574695168353,0,0.341467211508268,1.21553358534147,0.628839487883947,0,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0,0.377252682772152,0.37456602987953,0.256100609619477,0.229741875822453,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.532427418478012,0.476872379894642,0.290692833264657,0.470546902076653,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0.474540072496697,0.29551344712669,0.409231043169689,0.619747364743864,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0.765153328275374,0.220591419119515,0.231867835620421
|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,1.93684985162364,1.68946466582,2.34064526321993,1.88339765048055,1.59544317990673,2.05440875917447,1.22388563386596,0.666219523631325,1.01237633694913,2.09868563438444,2.68142840554502,1.7824876368746,3.81950686618227,8.50432901510698,0.595745707205312,0,0.319984845586813,0.22940928106717,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0.288851619751275,0.664938581433969,0.612508068787107,0,0,1.0470474879476,0.588231488031014,0,0.485510353031154,0,0.101376931219515,0,0,0,0.219686182734472,0.194429899074283,0.279972843250725,0,1.34226084846189,1.45072428402269,3.02484419228218,0.257259436035947,0.286533439938757,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0,0,0.220868540951614,0.489963196859816,0.0958454710182364,0,0,0.510749352340751,0.46081959976873,0.263772575460388,0,0,0.279182999001381,0.56276261003168,0,1.17851434189467,0.569486723196412,0,0.530083353332288,0.453429360640713,0,0,0,0,0,0.448026887097336,1.12355536105401,0.511290967734173,0.519572009205738,0.35333957451034,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0,1.59857431606684,3.10725460376606,0.148442139064825,0.346970653532272,0,0,0,0.470354828542819,0,0.741584903203122,0.144599356919912,0.884610551949874,0.808834249737046,0.883366073841574,0.969750506270444,0,0,0,0.510914110417183,1.67741174308288,0,1.90605340609597,0,0.457500602818626,1.38219787324151,0.347648640384553,0,0,0,1.01839363850316,0.373220911830279,0.505445516867349,0,0.390361328888111,0,0.360124259610698,0.150704817835715,0.476255494059295,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0.351902248327898,0.657587197282725,0.834141747676794,0.348252166522167,0,0,2.80885274925294,1.54408744268829,1.42081749697796,0,0.234526059981096,0,0.473489471170421,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0,0,0.219550115291051,0.134206418760372,0.420579897128254,0.514523061896422,0,0.264450566663544,0,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.58489226135736,1.79763881730844,0.648414149624083,0.597423819763102,0.569003702859245,0.456994050438915,0,0.407302655690628,0,0.280543279561274,0.505892296994058,0.295220295959204,0.156998727841375,0.246794327843601,0.296452627087149,0.166845105716094,1.17935397067922,0.449724224769707,1.01430060694251,0.964708639009667,1.01850340712568,0.287696137450811,0.810676133875177,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0,0,0.814824882210129,0.169745085775188,0.469380496577004,0.502518772325447,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.518054945597687,0.578596234326046,1.50791283939272,0.54390568381871,0.491764273019036,0.275936746304732,0.160550589987792,0.234423373184406,0.327869890753351,0.252470927204373,0,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0,0,0.790575555893047,0.321321316421807,0.283880170416537,0,0.488660878060728,0.329940245945071,0,0.485561272309963,0,0.188605079755898,0.885905678642318,0,0.516856586336442,0,0,0,2.10837217149998,1.03135543248187,0,0.18006109403131,0,0.643011105094777,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0.441056796109924,0,0.161464426695906,0.301564624640779,0.119372344003136,0,0.582961673259701,0,1.36696704638282,0.82554747185289,0.370389054739423,1.13021074202815,1.6403307326523,1.14389086603261,0.509935289981566,1.11961161858926,1.10559979043539,0,0.474503990371703,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.539457385539283,0.330613822901344,0.785267825952089,0.388844919875379,0,67.0794597034186,0.149516546043979,0,0.777804753376191,0.387479470433193,0.337912250981556,0.821500670520278,0.5208175393758,1.04859344425711,12.3207901621263,22.7543704943714,0.316011120628178,0.202725215290164,0.410843828659309,0.649604114888975,0.716106782669926,0.39736270956253,0.841368146639782,0.738447635872886,0.302899349844443,0.457240839929999,0.705783295957884,0.877120926657772,0.481059208201647,0.818138315270983,0.453460767230423,0.221985953374065,0.538283139656854,0.335769232728157,0,0.375364950902364,0.183151624267265,0.214368379079066,0,1.12950368523413,1.84130094602871,0,0.859265911718438,1.37016503954128,0.755393897389701,0,0.45032120322422,0,0.51776031175182,0.207574695168353,0,0.341467211508268,1.21553358534147,0.628839487883947,0,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0,0.377252682772152,0.37456602987953,0.256100609619477,0.229741875822453,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.532427418478012,0.476872379894642,0.290692833264657,0.470546902076653,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0.474540072496697,0.29551344712669,0.409231043169689,0.619747364743864,0.385813221962283,0.249810577937946,0.233931608445408,0.2148710540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|short_description=p5@Nup153
|short_description=p5@Nup153
}}
}}

Latest revision as of 16:09, 1 October 2015

Short description:p5@Nup153
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Nup153_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 260bp_to_ENSMUST00000021803, NM_175749, uc007qhj.2_5end
EntrezGene:Nup153
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Nup153

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.60
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.91
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G567.08
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H312.32
testis, neonate N30.CNhs11130.1391-42E222.75
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic cell1.31e-2232
hematopoietic oligopotent progenitor cell1.31e-2232
hematopoietic stem cell1.31e-2232
hematopoietic multipotent progenitor cell1.31e-2232
mature alpha-beta T cell6.37e-179
alpha-beta T cell6.37e-179
immature T cell6.37e-179
mature T cell6.37e-179
immature alpha-beta T cell6.37e-179
hematopoietic lineage restricted progenitor cell8.64e-1725
CD4-positive, alpha-beta T cell5.37e-158
lymphoid lineage restricted progenitor cell6.22e-1512
connective tissue cell5.24e-1446
mesenchymal cell5.24e-1446
lymphocyte1.31e-1313
common lymphoid progenitor1.31e-1313
T cell1.74e-1311
pro-T cell1.74e-1311
leukocyte5.45e-1217
nongranular leukocyte5.45e-1217
thymocyte1.14e-116
double negative thymocyte1.14e-116
naive T cell1.14e-116
double-positive, alpha-beta thymocyte1.14e-116
CD4-positive, alpha-beta thymocyte1.14e-116
naive thymus-derived CD4-positive, alpha-beta T cell1.14e-116
DN4 thymocyte1.14e-116
DN1 thymic pro-T cell1.14e-116
DN2 thymocyte1.14e-116
DN3 thymocyte1.14e-116
immature single positive thymocyte1.14e-116
early T lineage precursor1.14e-116
mature CD4 single-positive thymocyte1.14e-116
resting double-positive thymocyte1.14e-116
double-positive blast1.14e-116
CD69-positive double-positive thymocyte1.14e-116
CD69-positive, CD4-positive single-positive thymocyte1.14e-116
CD4-positive, CD8-intermediate double-positive thymocyte1.14e-116
CD24-positive, CD4 single-positive thymocyte1.14e-116
motile cell4.02e-1154
common myeloid progenitor1.65e-1019
myeloid cell1.67e-0816
megakaryocyte progenitor cell2.76e-086
megakaryocyte2.76e-086

Uber anatomy
Ontology termp-valuen
connective tissue5.24e-1446
hemolymphoid system1.82e-1148
immune system1.82e-1148
hematopoietic system5.14e-1145
blood island5.14e-1145
bone marrow1.67e-0816
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