FFCP PHASE1:Mm9::chr13:46822958..46822985,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=218210 | |EntrezGene=218210 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q3G8,Q3V3W1,Q8BRF6,Q80WR0 | |UniProt=E9Q3G8,Q3V3W1,Q8BRF6,Q80WR0 | ||
|association_with_transcript=232bp_to_ENSMUST00000021803,NM_175749,uc007qhj.2_5end | |association_with_transcript=232bp_to_ENSMUST00000021803,NM_175749,uc007qhj.2_5end | ||
|cluster_id=chr13:46822958..46822985,- | |||
|description=CAGE_peak_3_at_Nup153_5end | |description=CAGE_peak_3_at_Nup153_5end | ||
|id=chr13:46822958..46822985,- | |id=chr13:46822958..46822985,- | ||
|ontology_enrichment_celltype=CL:0000988!5.86e-09!32;CL:0002032!5.86e-09!32;CL:0000037!5.86e-09!32;CL:0000566!5.86e-09!32;CL:0000837!5.86e-09!32;CL:0000542!4.87e-07!13;CL:0000051!4.87e-07!13 | |ontology_enrichment_celltype=CL:0000988!5.86e-09!32;CL:0002032!5.86e-09!32;CL:0000037!5.86e-09!32;CL:0000566!5.86e-09!32;CL:0000837!5.86e-09!32;CL:0000542!4.87e-07!13;CL:0000051!4.87e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.12e-10,32;CL:0002032,2.12e-10,32;CL:0000037,2.12e-10,32;CL:0000837,2.12e-10,32;CL:0000542,1.57e-07,13;CL:0000051,1.57e-07,13;CL:0000838,3.69e-07,12;CL:0002031,7.14e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.91e-09!45;UBERON:0003061!4.91e-09!45;UBERON:0002193!7.89e-09!48;UBERON:0004177!1.81e-08!29;UBERON:0002405!2.45e-08!70;UBERON:0005057!3.07e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.09e-11,45;UBERON:0003061,5.09e-11,45;UBERON:0002193,7.20e-11,48;UBERON:0002405,7.20e-11,48;UBERON:0004177,4.08e-09,29;UBERON:0005057,4.08e-09,29;UBERON:0000077,1.15e-08,35;UBERON:0006562,7.62e-07,24;UBERON:0001557,7.62e-07,24;UBERON:0001042,7.62e-07,24;UBERON:0008814,7.62e-07,24;UBERON:0009145,7.62e-07,24 | |||
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|phase1_expression=0.960893082628764,0.348975407639361,0.909998478779072,0,0.500895729946347,0.671517087647559,0.934450562382103,5.16493293766305,10.98152032783,8.66038747391376,6.16384685611818,7.17949430958028,5.47842335779858,5.85716696207283,5.66286595086627,3.23960427823721,6.99561878128147,8.04428521663506,6.44437837946972,5.09267582157636,9.52484849691981,1.78723712161594,1.30599894569468,1.27993938234725,0.45881856213434,0,0.86152399231815,0.646413698057667,0.950117097281869,1.76421090831952,0.665191531965914,0.635030673459631,0.61506478758457,0,2.59966457776147,1.49611180822643,1.63335485009895,1.67412652294763,5.4693474116666,1.0470474879476,1.17646297606203,2.73218193983378,1.94204141212461,0.629484089877886,0.405507724878058,0.734187008646726,0,0.218025156380447,0.439372365468944,0.58328969722285,0.839918529752175,0,8.55691290894455,1.45072428402269,6.38578218370682,0,0.573066879877513,0.515672092277442,0.809265843438391,1.05798195854407,0,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0.725827286159344,0.675029691658453,0.420649922702764,0.571301968807607,1.32521124570968,1.10241719293459,0.383381884072945,0,0,0.127687338085188,0.921639199537461,1.05509030184155,0.548925861614458,1.04182674111352,0,0.56276261003168,0.61119299110724,1.47314292736834,1.28134512719193,0.931997229126503,1.28734528666413,1.20914496170857,0.579728977403356,0,2.719885334831,0.539703191637817,0,0.448026887097336,0.842666520790511,1.02258193546835,1.03914401841148,0.35333957451034,0.704217098883403,0,2.54805239706646,7.11066703153331,0,0.760079596425296,1.01104889002957,2.2836775943812,3.6251303710604,0.593768556259299,1.21439728736295,0.608930956624282,0.461230994512117,0.60289056221049,1.99900802130698,0.879666139307728,0.741584903203122,1.3013942122792,2.65383165584962,1.29413479957927,2.42925670306433,3.39412677194655,1.86391761218122,0.292780797011547,0.628340120440365,1.78819938646014,7.0690923458493,2.99951365496704,6.22644112658017,1.19832511523858,0.915001205637253,2.76439574648302,0.695297280769106,1.79000820131231,1.24672826735736,0.648965052271031,1.93494791315601,1.11966273549084,1.26361379216837,0.631325567659422,0.780722657776222,1.37941262660084,1.0803727788321,0.90422890701429,1.49680298132921,0.896796041993948,1.03071897015702,0.517406741478031,0.646703978798527,0.378212160335639,0.703804496655795,0.657587197282725,0.556094498451196,2.089512999133,0.823128545631774,1.19420560091096,5.61770549850588,2.57347907114715,5.39910648851626,1.03562886267751,1.17263029990548,1.2604344302271,0.946978942340841,0.393528463494808,0.462801338662135,0.697601834251224,0.268273401399619,0.700592054203017,0.658239399653922,0.656669856316381,0.486412857275134,0.584799949701329,0.878200461164203,0.402619256281115,1.05144974282064,3.08713837137853,0.660837565967596,1.32225283331772,2.55945900642281,0.928946687441754,0.902072229254653,1.61346819698674,1.33426826306922,0.951128130562796,1.42358718463353,1.4822905925161,0.502670417600539,1.39269530428806,0.779856348476481,2.69645822596266,1.94524244887225,0.597423819763102,1.32767530667157,1.48523066392647,2.25415471346161,1.22190796707189,0.387904974335251,1.54298803758701,0.69560190836683,1.18088118383682,1.09899109488962,0.616985819609003,1.1858105083486,2.8363667971736,1.96558995113203,2.02375901146368,3.24576194221605,2.41177159752417,1.2731292589071,0.287696137450811,2.7562988551756,2.19649130550465,1.43768206527355,1.86070473834252,1.5601883655728,1.76805214562978,0.717589654087649,1.92977408545347,1.84753190166605,1.89491411770485,0.977789858652155,1.01847051465113,1.40814148973101,1.17254380209271,0.476087281772027,1.17080188714679,1.10344600874334,0.44292937929755,0.956728611944923,1.14704320301017,1.55416483679306,1.15719246865209,1.50791283939272,2.17562273527484,0.491764273019036,1.10374698521893,0.963303539926752,0.234423373184406,0.655739781506702,1.00988370881749,0.631016438832513,1.17131623288992,0.861693590931196,1.19484398976276,0.891194696329576,0.566153061577665,0,1.16902343164525,1.58115111178609,0.963963949265421,0.99358059645788,0.534196811001766,2.11753047159649,0.989820737835213,1.32745138339963,1.45668381692989,0.604647113929502,0.943025398779491,0.885905678642318,0.922305443831782,2.06742634534577,0.363533729477506,2.13898427030833,0.948110273807448,0,2.06271086496374,1.70219802876894,0.36012218806262,0.776152102696527,0.428674070063185,1.59606210278046,1.24858172321449,0.987294123612726,0.913394847343798,1.87737366450968,1.90648863777438,0.882113592219848,1.15420377059036,2.09903754704677,1.20625849856312,1.07435109602823,0.820704498725306,1.1659233465194,0.370850604021019,4.78438466233988,1.65109494370578,2.40752885580625,2.63715839806567,4.78429797023588,5.26189798375002,3.73952545986482,4.19854356970974,3.45499934511059,0,1.10717597753397,0.813277868507395,1.40406943068342,0.627264888043406,0.655087691238533,0.944050424693745,1.07449492442937,0.785267825952089,0.388844919875379,0,51.8597503589455,1.79419855252775,1.15820943319968,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| ||
|short_description=p3@Nup153 | |short_description=p3@Nup153 | ||
}} | }} |
Latest revision as of 16:09, 1 October 2015
Short description: | p3@Nup153 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nup153_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 232bp_to_ENSMUST00000021803, NM_175749, uc007qhj.2_5end |
EntrezGene: | Nup153 |
Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.12e-10 | 32 |
hematopoietic oligopotent progenitor cell | 2.12e-10 | 32 |
hematopoietic stem cell | 2.12e-10 | 32 |
hematopoietic multipotent progenitor cell | 2.12e-10 | 32 |
lymphocyte | 1.57e-07 | 13 |
common lymphoid progenitor | 1.57e-07 | 13 |
lymphoid lineage restricted progenitor cell | 3.69e-07 | 12 |
hematopoietic lineage restricted progenitor cell | 7.14e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.09e-11 | 45 |
blood island | 5.09e-11 | 45 |
hemolymphoid system | 7.20e-11 | 48 |
immune system | 7.20e-11 | 48 |
hemopoietic organ | 4.08e-09 | 29 |
immune organ | 4.08e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 1.15e-08 | 35 |
pharynx | 7.62e-07 | 24 |
upper respiratory tract | 7.62e-07 | 24 |
chordate pharynx | 7.62e-07 | 24 |
pharyngeal arch system | 7.62e-07 | 24 |
pharyngeal region of foregut | 7.62e-07 | 24 |