FFCP PHASE1:Mm9::chr3:135488569..135488584,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67547 | |EntrezGene=67547 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-33bp_to_ENSMUST00000139953_5end | |association_with_transcript=-33bp_to_ENSMUST00000139953_5end | ||
|cluster_id=chr3:135488569..135488584,+ | |||
|description=CAGE_peak_5_at_Slc39a8_5end | |description=CAGE_peak_5_at_Slc39a8_5end | ||
|id=chr3:135488569..135488584,+ | |id=chr3:135488569..135488584,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!6.20e-13!131;UBERON:0009142!6.20e-13!131;UBERON:0009569!2.20e-12!66;UBERON:0005177!4.15e-12!85;UBERON:0000926!4.69e-11!193;UBERON:0004120!4.69e-11!193;UBERON:0006603!4.69e-11!193;UBERON:0002100!6.95e-11!98;UBERON:0002365!1.18e-10!25;UBERON:0002330!1.18e-10!25;UBERON:0000077!1.28e-10!97;UBERON:0001041!2.04e-10!92;UBERON:0005172!2.14e-10!49;UBERON:0005173!2.14e-10!49;UBERON:0002417!2.14e-10!49;UBERON:0000916!2.14e-10!49;UBERON:0009854!1.40e-09!23;UBERON:0009856!1.40e-09!23;UBERON:0002107!4.64e-09!22;UBERON:0007499!4.64e-09!22;UBERON:0006925!4.64e-09!22;UBERON:0009497!4.64e-09!22;UBERON:0000015!4.64e-09!22;UBERON:0002423!4.64e-09!22;UBERON:0006235!4.64e-09!22;UBERON:0008835!4.64e-09!22;UBERON:0003894!4.64e-09!22;UBERON:0004161!4.64e-09!22;UBERON:0008836!4.64e-09!22;UBERON:0002530!9.17e-09!65;UBERON:0005057!9.94e-08!51;UBERON:0002368!1.33e-07!60;UBERON:0000949!1.50e-07!72;UBERON:0005911!1.80e-07!69;UBERON:0001048!4.91e-07!147;UBERON:0000475!7.71e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.10e-14,25;UBERON:0002330,1.10e-14,25;UBERON:0009854,4.13e-13,23;UBERON:0009856,4.13e-13,23;UBERON:0002107,2.40e-12,22;UBERON:0007499,2.40e-12,22;UBERON:0006925,2.40e-12,22;UBERON:0009497,2.40e-12,22;UBERON:0000015,2.40e-12,22;UBERON:0002423,2.40e-12,22;UBERON:0006235,2.40e-12,22;UBERON:0008835,2.40e-12,22;UBERON:0003894,2.40e-12,22;UBERON:0004161,2.40e-12,22;UBERON:0008836,2.40e-12,22;UBERON:0009569,7.11e-12,66;UBERON:0001041,3.38e-11,80;UBERON:0005177,3.97e-11,79;UBERON:0002530,5.60e-11,65;UBERON:0005172,7.63e-11,49;UBERON:0005173,7.63e-11,49;UBERON:0002417,7.63e-11,49;UBERON:0000916,7.63e-11,49;UBERON:0005911,3.02e-10,69;UBERON:0002100,1.46e-09,90;UBERON:0003104,2.28e-09,61;UBERON:0009142,2.28e-09,61;UBERON:0002368,5.87e-09,60;UBERON:0000949,1.10e-08,72;UBERON:0003929,5.17e-08,55;UBERON:0003914,7.34e-07,47 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0.33575854382378,0.233612640595526,0.516493293766305,0.563154888606667,1.17032263160997,0,0.319088635981346,0.684802919724823,1.04904482902797,0.333109761815663,0.404950534779652,0.699561878128147,0.157731082679119,0.411343300817216,0,0.765389611359628,0.397163804803541,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.430942465371778,0.380046838912748,0.252030129759931,0,0.635030673459631,0.61506478758457,0,0.577703239502549,0.664938581433969,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0,1.51076181570693,0.202753862439029,0.734187008646726,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.699932108126813,0,0,1.45072428402269,0.672187598284928,0.771778308107841,0.573066879877513,0,0,0,0,0,0,1.3498495759221,0,0.7104801149461,0,0,0.311068836925433,0.135005938331691,0.210324961351382,0,0.883474163806454,0.244981598429908,0.383381884072945,0,0,0.638436690425939,0.921639199537461,0,0.457438218012048,0.52091337055676,0,0.56276261003168,0.30559649555362,1.17851434189467,1.13897344639282,0.745597783301202,0.075726193333184,0.604572480854284,1.15945795480671,2.58127163094416,0,2.69851595818909,2.59910566979068,4.92829575807069,1.12355536105401,0,0,0,1.83096445709685,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.91347103775248,0.776813650941515,0.148442139064825,0.346970653532272,0.608930956624282,0.691846491768175,0.753613202763113,1.05829836422134,0.628332956648377,5.43828929015623,1.3013942122792,0.884610551949874,0.485300549842228,0.441683036920787,1.93950101254089,1.86391761218122,0.585561594023094,0.41889341362691,0.510914110417183,0.958520996047362,1.19980546198682,1.65191295194984,1.64769703345305,0.915001205637253,0.376963056338593,0,0,0.62336413367868,0.811206315338788,1.01839363850316,0.622034853050465,2.0217820674694,0.420883711772948,0.520481771850815,0,0.900310649026746,0.753524089178575,0.476255494059295,0.2562274405697,0.468508622798644,1.03481348295606,0,0.378212160335639,0.351902248327898,1.09597866213787,1.39023624612799,1.39300866608867,1.4404749548556,0.995171334092466,1.40442637462647,0.51469581422943,0.852490498186778,0.828503090142008,0.703578179943289,1.2604344302271,1.18372367792605,1.18058539048442,0.771335564436891,0,0.804820204198858,0.934122738937356,0.16455984991348,0.656669856316381,0.243206428637567,0,0.658650345873152,1.20785776884335,0,0.205809224758569,0.330418782983798,0.528901133327089,0.639864751605702,1.16118335930219,0.257734922644187,0.80673409849337,1.33426826306922,0.951128130562796,0,0.329397909448022,0.754005626400808,0.198956472041151,0.58489226135736,0,0.648414149624083,1.1948476395262,0.948339504765408,1.25673363870702,1.1270773567308,1.4255592949172,3.49114476901726,2.10407459670956,2.84564417059158,1.47610147979602,2.82597710114475,1.23397163921801,1.48226313543574,1.00107063429656,0.982794975566015,1.12431056192427,1.42002084971952,1.4470629585145,1.78238096246994,1.15078454980324,1.29708181420028,1.09824565275233,5.75072826109418,2.60498663367952,2.49630138491648,3.28352541331245,3.04975602987251,2.41221760681684,2.40179147216586,0.947457058852424,1.30371981153621,0.848725428875941,1.17345124144251,0.837531287209079,2.38043640886014,0.585400943573396,1.41871629695572,1.10732344824387,1.11618338060241,1.63863314715738,1.89953480052485,0.433947175744535,0,1.63171705145613,7.86822836830458,3.31124095565679,0.321101179975584,0.703270119553219,0.819674726883377,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0.851640511249612,1.06839362200353,0.81443479676788,0.329940245945071,1.32745138339963,1.69946445308487,0.302323556964751,0.565815239267694,0.885905678642318,0.614870295887855,1.29214146584111,1.09060118843252,0.712994756769443,1.26414703174326,0,0,0,1.08036656418786,1.68166288917581,0.857348140126369,0.709360934569094,0.713475270408282,1.31639216481697,1.8267896946876,1.17335854031855,0.42366414172764,2.8668691747145,1.97863503529776,1.77610869365496,1.02531972377865,1.43246812803764,2.46211349617592,0,0.741701208042039,0.683483523191411,1.23832120777933,0.740778109478847,0.941842285023455,0.683471138605126,0.457556346413045,1.01987057996313,1.53946597556024,1.10559979043539,2.86401185404534,1.73984796469624,0.406638934253697,0.540026704109006,1.25452977608681,1.31017538247707,0.134864346384821,0.991841468704031,0,1.55537967950151,1.24267862617385,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0,0.675824501963113,0.704143431874524,0.13020438484395,0.209718688851422,0,0.576060012515731,0.316011120628178,1.82452693761148,1.23253148597793,1.42912905275575,1.43221356533985,1.39076948346885,1.20195449519969,0.886137163047463,1.21159739937777,1.06689529317,0.604957110821043,1.26695244961678,0.673482891482306,1.8700304349051,0.453460767230423,0,0,0,0.772758376128762,1.68914227906064,2.38097111547445,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0.31136204275253,0.798049746802062,0.512200817262403,0.729320151204882,0,0.367687016900028,1.11123363900808,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.842773567228942,0.704276676453562,1.09127391015665,1.42888107384922,1.0429589335037,0.578727661391115,0,0.883193520806384,0.685738504770831,0.70990322463735,1.1921809497366,0.581385666529314,1.03520318456864,0.676916863133412,0.914639864363863,0,0.679020569229309,0,0.474540072496697,0.29551344712669,1.22769312950907,1.23949472948773,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0.382576664137687,0.661774257358546,0.463735671240843 | |phase1_expression=0.480446541314382,0,0,0,0,0.33575854382378,0.233612640595526,0.516493293766305,0.563154888606667,1.17032263160997,0,0.319088635981346,0.684802919724823,1.04904482902797,0.333109761815663,0.404950534779652,0.699561878128147,0.157731082679119,0.411343300817216,0,0.765389611359628,0.397163804803541,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.430942465371778,0.380046838912748,0.252030129759931,0,0.635030673459631,0.61506478758457,0,0.577703239502549,0.664938581433969,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0,1.51076181570693,0.202753862439029,0.734187008646726,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.699932108126813,0,0,1.45072428402269,0.672187598284928,0.771778308107841,0.573066879877513,0,0,0,0,0,0,1.3498495759221,0,0.7104801149461,0,0,0.311068836925433,0.135005938331691,0.210324961351382,0,0.883474163806454,0.244981598429908,0.383381884072945,0,0,0.638436690425939,0.921639199537461,0,0.457438218012048,0.52091337055676,0,0.56276261003168,0.30559649555362,1.17851434189467,1.13897344639282,0.745597783301202,0.075726193333184,0.604572480854284,1.15945795480671,2.58127163094416,0,2.69851595818909,2.59910566979068,4.92829575807069,1.12355536105401,0,0,0,1.83096445709685,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.91347103775248,0.776813650941515,0.148442139064825,0.346970653532272,0.608930956624282,0.691846491768175,0.753613202763113,1.05829836422134,0.628332956648377,5.43828929015623,1.3013942122792,0.884610551949874,0.485300549842228,0.441683036920787,1.93950101254089,1.86391761218122,0.585561594023094,0.41889341362691,0.510914110417183,0.958520996047362,1.19980546198682,1.65191295194984,1.64769703345305,0.915001205637253,0.376963056338593,0,0,0.62336413367868,0.811206315338788,1.01839363850316,0.622034853050465,2.0217820674694,0.420883711772948,0.520481771850815,0,0.900310649026746,0.753524089178575,0.476255494059295,0.2562274405697,0.468508622798644,1.03481348295606,0,0.378212160335639,0.351902248327898,1.09597866213787,1.39023624612799,1.39300866608867,1.4404749548556,0.995171334092466,1.40442637462647,0.51469581422943,0.852490498186778,0.828503090142008,0.703578179943289,1.2604344302271,1.18372367792605,1.18058539048442,0.771335564436891,0,0.804820204198858,0.934122738937356,0.16455984991348,0.656669856316381,0.243206428637567,0,0.658650345873152,1.20785776884335,0,0.205809224758569,0.330418782983798,0.528901133327089,0.639864751605702,1.16118335930219,0.257734922644187,0.80673409849337,1.33426826306922,0.951128130562796,0,0.329397909448022,0.754005626400808,0.198956472041151,0.58489226135736,0,0.648414149624083,1.1948476395262,0.948339504765408,1.25673363870702,1.1270773567308,1.4255592949172,3.49114476901726,2.10407459670956,2.84564417059158,1.47610147979602,2.82597710114475,1.23397163921801,1.48226313543574,1.00107063429656,0.982794975566015,1.12431056192427,1.42002084971952,1.4470629585145,1.78238096246994,1.15078454980324,1.29708181420028,1.09824565275233,5.75072826109418,2.60498663367952,2.49630138491648,3.28352541331245,3.04975602987251,2.41221760681684,2.40179147216586,0.947457058852424,1.30371981153621,0.848725428875941,1.17345124144251,0.837531287209079,2.38043640886014,0.585400943573396,1.41871629695572,1.10732344824387,1.11618338060241,1.63863314715738,1.89953480052485,0.433947175744535,0,1.63171705145613,7.86822836830458,3.31124095565679,0.321101179975584,0.703270119553219,0.819674726883377,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0.851640511249612,1.06839362200353,0.81443479676788,0.329940245945071,1.32745138339963,1.69946445308487,0.302323556964751,0.565815239267694,0.885905678642318,0.614870295887855,1.29214146584111,1.09060118843252,0.712994756769443,1.26414703174326,0,0,0,1.08036656418786,1.68166288917581,0.857348140126369,0.709360934569094,0.713475270408282,1.31639216481697,1.8267896946876,1.17335854031855,0.42366414172764,2.8668691747145,1.97863503529776,1.77610869365496,1.02531972377865,1.43246812803764,2.46211349617592,0,0.741701208042039,0.683483523191411,1.23832120777933,0.740778109478847,0.941842285023455,0.683471138605126,0.457556346413045,1.01987057996313,1.53946597556024,1.10559979043539,2.86401185404534,1.73984796469624,0.406638934253697,0.540026704109006,1.25452977608681,1.31017538247707,0.134864346384821,0.991841468704031,0,1.55537967950151,1.24267862617385,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0,0.675824501963113,0.704143431874524,0.13020438484395,0.209718688851422,0,0.576060012515731,0.316011120628178,1.82452693761148,1.23253148597793,1.42912905275575,1.43221356533985,1.39076948346885,1.20195449519969,0.886137163047463,1.21159739937777,1.06689529317,0.604957110821043,1.26695244961678,0.673482891482306,1.8700304349051,0.453460767230423,0,0,0,0.772758376128762,1.68914227906064,2.38097111547445,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0.31136204275253,0.798049746802062,0.512200817262403,0.729320151204882,0,0.367687016900028,1.11123363900808,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.842773567228942,0.704276676453562,1.09127391015665,1.42888107384922,1.0429589335037,0.578727661391115,0,0.883193520806384,0.685738504770831,0.70990322463735,1.1921809497366,0.581385666529314,1.03520318456864,0.676916863133412,0.914639864363863,0,0.679020569229309,0,0.474540072496697,0.29551344712669,1.22769312950907,1.23949472948773,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0.382576664137687,0.661774257358546,0.463735671240843 | ||
|short_description=p5@Slc39a8 | |short_description=p5@Slc39a8 | ||
}} | }} |
Latest revision as of 16:10, 1 October 2015
Short description: | p5@Slc39a8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Slc39a8_5end |
Coexpression cluster: | NA |
Association with transcript: | -33bp_to_ENSMUST00000139953_5end |
EntrezGene: | Slc39a8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 1.10e-14 | 25 |
exocrine system | 1.10e-14 | 25 |
digestive tract diverticulum | 4.13e-13 | 23 |
sac | 4.13e-13 | 23 |
liver | 2.40e-12 | 22 |
epithelial sac | 2.40e-12 | 22 |
digestive gland | 2.40e-12 | 22 |
epithelium of foregut-midgut junction | 2.40e-12 | 22 |
anatomical boundary | 2.40e-12 | 22 |
hepatobiliary system | 2.40e-12 | 22 |
foregut-midgut junction | 2.40e-12 | 22 |
hepatic diverticulum | 2.40e-12 | 22 |
liver primordium | 2.40e-12 | 22 |
septum transversum | 2.40e-12 | 22 |
liver bud | 2.40e-12 | 22 |
subdivision of trunk | 7.11e-12 | 66 |
foregut | 3.38e-11 | 80 |
trunk region element | 3.97e-11 | 79 |
gland | 5.60e-11 | 65 |
abdomen element | 7.63e-11 | 49 |
abdominal segment element | 7.63e-11 | 49 |
abdominal segment of trunk | 7.63e-11 | 49 |
abdomen | 7.63e-11 | 49 |
endo-epithelium | 3.02e-10 | 69 |
trunk | 1.46e-09 | 90 |
mesenchyme | 2.28e-09 | 61 |
entire embryonic mesenchyme | 2.28e-09 | 61 |
endocrine gland | 5.87e-09 | 60 |
endocrine system | 1.10e-08 | 72 |
gut epithelium | 5.17e-08 | 55 |
epithelial tube | 7.34e-07 | 47 |