FFCP PHASE1:Mm9::chr8:127316873..127316880,+: Difference between revisions
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{{FFCP|EntrezGene=330863|HGNC=|MCL_coexpression_id=22|UniProt=Q505D9,Q8BQ60|association_with_transcript=-38bp_to_ENSMUST00000167588,NM_198632,uc012gmz.1_5end|description=CAGE_peak_7_at_Trim67_5end|id=chr8:127316873..127316880,+|ontology_enrichment_celltype=CL:0000117!3.27e-14!23;CL:0000337!3.27e-14!23;CL:0000540!1.41e-10!33;CL:0000047!1.41e-10!33;CL:0000031!1.41e-10!33;CL:0000404!1.41e-10!33;CL:0002319!1.91e-08!43;CL:0000393!1.93e-08!39;CL:0000211!1.93e-08!39;CL:0000221!3.57e-08!44;CL:0000133!3.57e-08!44;CL:0002612!4.06e-08!3;CL:0002613!5.85e-08!3;CL:0000055!8.79e-07!50|ontology_enrichment_celltype_v019_2=CL:0002613,8.02e-16,3;CL:0002612,1.12e-15,3;CL:0000117,8.45e-09,23;CL:0000337,8.45e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002240!1.46e-09!6;UBERON:0005174!1.46e-09!6;UBERON:0001137!1.46e-09!6;UBERON:0002020!1.43e-08!34;UBERON:0002257!4.06e-08!3;UBERON:0001948!6.99e-08!5;UBERON:0002315!6.99e-08!5;UBERON:0000369!7.57e-08!5;UBERON:0002435!7.57e-08!5;UBERON:0000204!7.57e-08!5;UBERON:0010082!7.57e-08!5;UBERON:0002346!8.80e-07!71;UBERON:0003075!8.80e-07!71;UBERON:0007284!8.80e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0002257,1.12e-15,3;UBERON:0000369,4.56e-10,5;UBERON:0002435,4.56e-10,5;UBERON:0000204,4.56e-10,5;UBERON:0010082,4.56e-10,5;UBERON:0001948,5.59e-10,5;UBERON:0002315,5.59e-10,5;UBERON:0002240,1.52e-08,6;UBERON:0005174,1.52e-08,6;UBERON:0001137,1.52e-08,6;UBERON:0002420,8.61e-07,8;UBERON:0007245,8.61e-07,8;UBERON:0010009,8.61e-07,8;UBERON:0010011,8.61e-07,8;UBERON:0000454,8.61e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0,0.220868540951614,0.122490799214954,0.287536413054709,0,0,0,0,0.263772575460388,1.46380229763855,0.52091337055676,0,0,0,0.294628585473668,1.13897344639282,0.745597783301202,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0.251308704225729,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.682934423016537,0.243106717068294,0.419226325255965,0.183843508450014,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.619747364743864,0,0.249810577937946,0,0,0,0,0|short_description=p7@Trim67}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=330863 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q505D9,Q8BQ60 | |||
|association_with_transcript=-38bp_to_ENSMUST00000167588,NM_198632,uc012gmz.1_5end | |||
|cluster_id=chr8:127316873..127316880,+ | |||
|description=CAGE_peak_7_at_Trim67_5end | |||
|id=chr8:127316873..127316880,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.27e-14!23;CL:0000337!3.27e-14!23;CL:0000540!1.41e-10!33;CL:0000047!1.41e-10!33;CL:0000031!1.41e-10!33;CL:0000404!1.41e-10!33;CL:0002319!1.91e-08!43;CL:0000393!1.93e-08!39;CL:0000211!1.93e-08!39;CL:0000221!3.57e-08!44;CL:0000133!3.57e-08!44;CL:0002612!4.06e-08!3;CL:0002613!5.85e-08!3;CL:0000055!8.79e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,8.02e-16,3;CL:0002612,1.12e-15,3;CL:0000117,8.45e-09,23;CL:0000337,8.45e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!1.46e-09!6;UBERON:0005174!1.46e-09!6;UBERON:0001137!1.46e-09!6;UBERON:0002020!1.43e-08!34;UBERON:0002257!4.06e-08!3;UBERON:0001948!6.99e-08!5;UBERON:0002315!6.99e-08!5;UBERON:0000369!7.57e-08!5;UBERON:0002435!7.57e-08!5;UBERON:0000204!7.57e-08!5;UBERON:0010082!7.57e-08!5;UBERON:0002346!8.80e-07!71;UBERON:0003075!8.80e-07!71;UBERON:0007284!8.80e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,1.12e-15,3;UBERON:0000369,4.56e-10,5;UBERON:0002435,4.56e-10,5;UBERON:0000204,4.56e-10,5;UBERON:0010082,4.56e-10,5;UBERON:0001948,5.59e-10,5;UBERON:0002315,5.59e-10,5;UBERON:0002240,1.52e-08,6;UBERON:0005174,1.52e-08,6;UBERON:0001137,1.52e-08,6;UBERON:0002420,8.61e-07,8;UBERON:0007245,8.61e-07,8;UBERON:0010009,8.61e-07,8;UBERON:0010011,8.61e-07,8;UBERON:0000454,8.61e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0,0.220868540951614,0.122490799214954,0.287536413054709,0,0,0,0,0.263772575460388,1.46380229763855,0.52091337055676,0,0,0,0.294628585473668,1.13897344639282,0.745597783301202,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0.251308704225729,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.682934423016537,0.243106717068294,0.419226325255965,0.183843508450014,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.619747364743864,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p7@Trim67 | |||
}} |
Latest revision as of 17:37, 1 October 2015
Short description: | p7@Trim67 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Trim67_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -38bp_to_ENSMUST00000167588, NM_198632, uc012gmz.1_5end |
EntrezGene: | Trim67 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 8.02e-16 | 3 |
neuron of the ventral spinal cord | 1.12e-15 | 3 |
CNS neuron (sensu Vertebrata) | 8.45e-09 | 23 |
neuroblast (sensu Vertebrata) | 8.45e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 1.12e-15 | 3 |
corpus striatum | 4.56e-10 | 5 |
striatum | 4.56e-10 | 5 |
ventral part of telencephalon | 4.56e-10 | 5 |
future corpus striatum | 4.56e-10 | 5 |
regional part of spinal cord | 5.59e-10 | 5 |
gray matter of spinal cord | 5.59e-10 | 5 |
spinal cord | 1.52e-08 | 6 |
dorsal region element | 1.52e-08 | 6 |
dorsum | 1.52e-08 | 6 |
basal ganglion | 8.61e-07 | 8 |
nuclear complex of neuraxis | 8.61e-07 | 8 |
aggregate regional part of brain | 8.61e-07 | 8 |
collection of basal ganglia | 8.61e-07 | 8 |
cerebral subcortex | 8.61e-07 | 8 |