FFCP PHASE1:Mm9::chrX:160688308..160688314,-: Difference between revisions
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|id=chrX:160688308..160688314,-
|short_description=p3@Bmx
|description=CAGE_peak_3_at_Bmx_5end
|association_with_transcript=-8bp_to_ENSMUST00000112263_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12169 | |EntrezGene=12169 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=331 | |||
|TSSclassifier=NA | |||
|UniProt=P97504 | |UniProt=P97504 | ||
|association_with_transcript=-8bp_to_ENSMUST00000112263_5end | |||
|cluster_id=chrX:160688308..160688314,- | |||
|description=CAGE_peak_3_at_Bmx_5end | |||
|id=chrX:160688308..160688314,- | |||
|ontology_enrichment_celltype=CL:0002250!3.15e-09!3;CL:0000473!1.59e-08!3;CL:0000627!1.59e-08!3;CL:0000682!1.59e-08!3;CL:0002563!7.23e-08!9;CL:0002251!7.23e-08!9;CL:0000066!2.73e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.06e-17,3;CL:0002563,4.75e-16,9;CL:0002251,4.75e-16,9;CL:0000066,1.73e-10,25;CL:0002076,1.38e-09,15;CL:0000682,4.63e-08,3;CL:0000223,3.78e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.31e-14!15;UBERON:0001007!5.64e-13!128;UBERON:0001555!5.64e-13!128;UBERON:0007026!5.64e-13!128;UBERON:0004119!1.13e-12!130;UBERON:0000925!1.13e-12!130;UBERON:0006595!1.13e-12!130;UBERON:0004921!6.98e-11!126;UBERON:0004185!6.98e-11!126;UBERON:0001242!5.27e-10!13;UBERON:0000060!5.27e-10!13;UBERON:0001262!5.27e-10!13;UBERON:0004786!5.27e-10!13;UBERON:0003929!3.11e-08!55;UBERON:0004923!4.02e-08!24;UBERON:0005409!4.28e-08!59;UBERON:0000160!5.38e-08!43;UBERON:0003350!7.23e-08!9;UBERON:0004808!7.23e-08!9;UBERON:0001277!7.23e-08!9;UBERON:0005911!9.20e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.92e-30,15;UBERON:0001242,4.31e-21,13;UBERON:0001262,4.31e-21,13;UBERON:0004786,4.31e-21,13;UBERON:0004923,2.40e-18,24;UBERON:0000160,6.54e-17,31;UBERON:0003350,4.75e-16,9;UBERON:0004808,4.75e-16,9;UBERON:0001277,4.75e-16,9;UBERON:0000485,4.06e-13,11;UBERON:0005409,5.58e-13,47;UBERON:0001962,2.02e-12,2;UBERON:0001961,2.02e-12,2;UBERON:0001744,2.02e-12,2;UBERON:0002465,1.42e-08,3;UBERON:0001007,1.21e-07,116;UBERON:0001555,1.21e-07,116;UBERON:0007026,1.21e-07,116;UBERON:0004119,1.76e-07,118;UBERON:0000925,1.76e-07,118;UBERON:0006595,1.76e-07,118;UBERON:0003199,6.93e-07,1 | |||
|phase1_expression=0,0,0,0,0,17.6273235507484,11.4470193891808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91971964335605,2.2940928106717,1.72269589234506,0.86152399231815,1.07735616342945,0,0,1.99557459589774,0,0,0,2.88851619751275,2.49351968037739,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,1.79763881730844,1.29682829924817,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,1.04702376793612,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0,0,0.240390899039938,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.877120926657772,0.481059208201647,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,17.6273235507484,11.4470193891808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91971964335605,2.2940928106717,1.72269589234506,0.86152399231815,1.07735616342945,0,0,1.99557459589774,0,0,0,2.88851619751275,2.49351968037739,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,1.79763881730844,1.29682829924817,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,1.04702376793612,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0,0,0.240390899039938,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.877120926657772,0.481059208201647,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@Bmx | |||
}} | }} |
Latest revision as of 18:11, 1 October 2015
Short description: | p3@Bmx |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Bmx_5end |
Coexpression cluster: | MCL_coexpression_mm9:331 |
Association with transcript: | -8bp_to_ENSMUST00000112263_5end |
EntrezGene: | Bmx |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.06e-17 | 3 |
intestinal epithelial cell | 4.75e-16 | 9 |
epithelial cell of alimentary canal | 4.75e-16 | 9 |
epithelial cell | 1.73e-10 | 25 |
endo-epithelial cell | 1.38e-09 | 15 |
M cell of gut | 4.63e-08 | 3 |
endodermal cell | 3.78e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.92e-30 | 15 |
intestinal mucosa | 4.31e-21 | 13 |
wall of intestine | 4.31e-21 | 13 |
gastrointestinal system mucosa | 4.31e-21 | 13 |
organ component layer | 2.40e-18 | 24 |
intestine | 6.54e-17 | 31 |
epithelium of mucosa | 4.75e-16 | 9 |
gastrointestinal system epithelium | 4.75e-16 | 9 |
intestinal epithelium | 4.75e-16 | 9 |
simple columnar epithelium | 4.06e-13 | 11 |
gastrointestinal system | 5.58e-13 | 47 |
gut-associated lymphoid tissue | 2.02e-12 | 2 |
mucosa-associated lymphoid tissue | 2.02e-12 | 2 |
lymphoid tissue | 2.02e-12 | 2 |
lymphoid system | 1.42e-08 | 3 |
digestive system | 1.21e-07 | 116 |
digestive tract | 1.21e-07 | 116 |
primitive gut | 1.21e-07 | 116 |
endoderm-derived structure | 1.76e-07 | 118 |
endoderm | 1.76e-07 | 118 |
presumptive endoderm | 1.76e-07 | 118 |
egg chamber | 6.93e-07 | 1 |