FFCP PHASE1:Mm9::chr1:90912298..90912303,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73475 | |EntrezGene=73475 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-384bp_to_NR_040471_5end | |association_with_transcript=-384bp_to_NR_040471_5end | ||
|cluster_id=chr1:90912298..90912303,+ | |||
|description=CAGE_peak_3_at_1700067G17Rik_5end | |description=CAGE_peak_3_at_1700067G17Rik_5end | ||
|id=chr1:90912298..90912303,+ | |id=chr1:90912298..90912303,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.54e-16!9;CL:0002251!3.54e-16!9;CL:0002076!8.11e-16!15;CL:0000223!4.56e-13!20;CL:0000066!7.24e-13!25;CL:0000075!5.26e-12!7;CL:0000239!4.13e-11!6;CL:0000677!4.13e-11!6;CL:0000212!4.13e-11!6;CL:0000584!4.13e-11!6 | |ontology_enrichment_celltype=CL:0002563!3.54e-16!9;CL:0002251!3.54e-16!9;CL:0002076!8.11e-16!15;CL:0000223!4.56e-13!20;CL:0000066!7.24e-13!25;CL:0000075!5.26e-12!7;CL:0000239!4.13e-11!6;CL:0000677!4.13e-11!6;CL:0000212!4.13e-11!6;CL:0000584!4.13e-11!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.98e-48,9;CL:0002251,4.98e-48,9;CL:0002076,6.25e-47,15;CL:0000223,3.74e-35,20;CL:0000066,4.47e-28,25;CL:0002250,7.38e-28,3;CL:0000239,9.58e-24,6;CL:0000677,9.58e-24,6;CL:0000584,9.58e-24,6;CL:0000075,2.01e-20,7;CL:0000068,2.77e-12,3;CL:0002202,2.77e-12,3;CL:0000069,2.77e-12,3;CL:0002632,2.77e-12,3;CL:0002368,2.77e-12,3;CL:0000307,2.77e-12,3;CL:0000377,2.77e-12,3;CL:0002321,9.30e-10,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.80e-18!15;UBERON:0003350!3.54e-16!9;UBERON:0004808!3.54e-16!9;UBERON:0001277!3.54e-16!9;UBERON:0001242!1.20e-15!13;UBERON:0000060!1.20e-15!13;UBERON:0001262!1.20e-15!13;UBERON:0004786!1.20e-15!13;UBERON:0000485!2.86e-15!11;UBERON:0004923!1.62e-11!24;UBERON:0005178!4.49e-09!17;UBERON:0005181!4.49e-09!17;UBERON:0002224!4.49e-09!17;UBERON:0000915!4.49e-09!17;UBERON:0008947!4.49e-09!17;UBERON:0003258!4.49e-09!17;UBERON:0005911!1.03e-08!69;UBERON:0000065!4.58e-08!41;UBERON:0001004!9.13e-08!42;UBERON:0004119!2.61e-07!130;UBERON:0000925!2.61e-07!130;UBERON:0006595!2.61e-07!130;UBERON:0001007!6.41e-07!128;UBERON:0001555!6.41e-07!128;UBERON:0007026!6.41e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.98e-48,9;UBERON:0004808,4.98e-48,9;UBERON:0001277,4.98e-48,9;UBERON:0000485,2.66e-39,11;UBERON:0001242,2.98e-33,13;UBERON:0001262,2.98e-33,13;UBERON:0004786,2.98e-33,13;UBERON:0000344,8.24e-29,15;UBERON:0004923,5.86e-18,24;UBERON:0000160,7.41e-14,31;UBERON:0003126,2.77e-12,3;UBERON:0001005,2.77e-12,3;UBERON:0007196,2.77e-12,3;UBERON:0001558,2.77e-12,3;UBERON:0005409,4.86e-09,47;UBERON:0003929,1.13e-07,55 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,2.72217790176147,4.00716583957078,1.6787927191189,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0.68822784320151,0,0,0.430942465371778,0.570070258369122,0,0.665191531965914,0,0,0,10.9763615505484,4.3221007793208,9.18762103180661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.432982082022428,1.52015919285059,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0.581857461502877,0.0701358198903186,0.126473074248515,0,0.627994911365499,1.1105744752962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0.169745085775188,0,0.167506257441816,0.476087281772027,0,0,0.221464689648775,0,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.552799895217695,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0.206035057238894,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0.697950815278722,0.909998478779072,2.72217790176147,4.00716583957078,1.6787927191189,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0.68822784320151,0,0,0.430942465371778,0.570070258369122,0,0.665191531965914,0,0,0,10.9763615505484,4.3221007793208,9.18762103180661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.432982082022428,1.52015919285059,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0.581857461502877,0.0701358198903186,0.126473074248515,0,0.627994911365499,1.1105744752962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0.169745085775188,0,0.167506257441816,0.476087281772027,0,0,0.221464689648775,0,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.552799895217695,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0.206035057238894,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p3@1700067G17Rik | |short_description=p3@1700067G17Rik | ||
}} | }} |
Latest revision as of 18:47, 1 October 2015
Short description: | p3@1700067G17Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_1700067G17Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | -384bp_to_NR_040471_5end |
EntrezGene: | 1700067G17Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.98e-48 | 9 |
epithelial cell of alimentary canal | 4.98e-48 | 9 |
endo-epithelial cell | 6.25e-47 | 15 |
endodermal cell | 3.74e-35 | 20 |
epithelial cell | 4.47e-28 | 25 |
intestinal crypt stem cell | 7.38e-28 | 3 |
brush border epithelial cell | 9.58e-24 | 6 |
gut absorptive cell | 9.58e-24 | 6 |
enterocyte | 9.58e-24 | 6 |
columnar/cuboidal epithelial cell | 2.01e-20 | 7 |
duct epithelial cell | 2.77e-12 | 3 |
epithelial cell of tracheobronchial tree | 2.77e-12 | 3 |
branched duct epithelial cell | 2.77e-12 | 3 |
epithelial cell of lower respiratory tract | 2.77e-12 | 3 |
respiratory epithelial cell | 2.77e-12 | 3 |
tracheal epithelial cell | 2.77e-12 | 3 |
tracheoblast | 2.77e-12 | 3 |
embryonic cell | 9.30e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 4.98e-48 | 9 |
gastrointestinal system epithelium | 4.98e-48 | 9 |
intestinal epithelium | 4.98e-48 | 9 |
simple columnar epithelium | 2.66e-39 | 11 |
intestinal mucosa | 2.98e-33 | 13 |
wall of intestine | 2.98e-33 | 13 |
gastrointestinal system mucosa | 2.98e-33 | 13 |
mucosa | 8.24e-29 | 15 |
organ component layer | 5.86e-18 | 24 |
intestine | 7.41e-14 | 31 |
trachea | 2.77e-12 | 3 |
respiratory airway | 2.77e-12 | 3 |
tracheobronchial tree | 2.77e-12 | 3 |
lower respiratory tract | 2.77e-12 | 3 |
gastrointestinal system | 4.86e-09 | 47 |
gut epithelium | 1.13e-07 | 55 |