FFCP PHASE1:Mm9::chr11:60590716..60590727,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:60590716..60590727,-
|short_description=p3@Top3a
|description=CAGE_peak_3_at_Top3a_5end
|association_with_transcript=38bp_to_ENSMUST00000101115,ENSMUST000...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=21975 | |EntrezGene=21975 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TPE4,B0QZI1 | |UniProt=Q3TPE4,B0QZI1 | ||
|association_with_transcript=38bp_to_ENSMUST00000101115,ENSMUST00000120417_5end | |||
|cluster_id=chr11:60590716..60590727,- | |||
|description=CAGE_peak_3_at_Top3a_5end | |||
|id=chr11:60590716..60590727,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.87e-12,32;CL:0002032,3.87e-12,32;CL:0000037,3.87e-12,32;CL:0000837,3.87e-12,32;CL:0000838,1.19e-07,12;CL:0002320,1.27e-07,46;CL:0000134,1.27e-07,46;CL:0000219,3.26e-07,54;CL:0000738,4.07e-07,17;CL:0002087,4.07e-07,17;CL:0000542,5.16e-07,13;CL:0000051,5.16e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!7.89e-08!18;UBERON:0005564!7.89e-08!18;UBERON:0004176!1.12e-07!17;UBERON:0009196!1.12e-07!17;UBERON:0009117!1.12e-07!17;UBERON:0003101!5.59e-07!16;UBERON:0000079!5.59e-07!16;UBERON:0000473!5.66e-07!14;UBERON:0003135!8.75e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.20e-12,14;UBERON:0003135,4.04e-11,15;UBERON:0003101,2.43e-10,16;UBERON:0000079,2.43e-10,16;UBERON:0004176,1.18e-09,17;UBERON:0009196,1.18e-09,17;UBERON:0009117,1.18e-09,17;UBERON:0000991,4.83e-09,18;UBERON:0005564,4.83e-09,18;UBERON:0002384,1.27e-07,46 | |||
|phase1_expression=0.480446541314382,0,0,0,0.500895729946347,0,0.233612640595526,1.54947988129892,2.25261955442667,1.87251621057595,0.34243593645101,0.239316476986009,1.02720437958723,0.611942816932982,0,0.202475267389826,0,0,0.274228867211478,0,1.7008658030214,1.29078236561151,0.783599367416806,0,0,0,0,0.430942465371778,0,0,0,0,1.23012957516914,0,0,0,0,0.418531630736908,0,0,0,0,0,0.377690453926732,0.202753862439029,0.550640256485045,0.782391344348039,0,0.219686182734472,0.194429899074283,0,1.43752564364972,2.01339127269284,0,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.405017814995072,0.210324961351382,0,0,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0.457438218012048,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0.372798891650601,0.302904773332736,0.226714680320357,0.289864488701678,0,0.679971333707751,0,0.649776417447669,0,0.421333260395256,0.170430322578058,0,0,0.704217098883403,1.28326477414318,0,0,0.649473123033642,1.26679932737549,0.505524445014783,0.45673551887624,0.258937883647172,0,0.346970653532272,0,0.230615497256059,0.452167921657868,0.705532242814229,0.502666365318702,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,2.75574786363617,1.79970819298022,3.30382590389968,0.149790639404823,0,0.376963056338593,0,0,0.20778804455956,0,0.611036183101898,0.248813941220186,0.252722758433675,0,0.260240885925407,0.229902104433473,0.180062129805349,0,1.02054748726992,0.384341160854549,0.749613796477831,0,0.646703978798527,0.378212160335639,0.351902248327898,0.657587197282725,0,0,0,0.398068533636986,1.40442637462647,0.51469581422943,2.27330799516474,0.207125772535502,0.469052119962192,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.350296027101508,0.16455984991348,0.32833492815819,0,0,0,0,0,0.102904612379284,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0.201683524623343,0.667134131534611,0.380451252225118,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.561086559122548,0.252946148497029,0,0.156998727841375,0.370191491765402,0.592905254174298,0.333690211432188,0.196558995113203,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0,0.568474235311454,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0.318909537314974,0,0.345369963731791,0.289298117163023,3.01582567878545,0.54390568381871,0.491764273019036,0.275936746304732,0,0.117211686592203,0.163934945376675,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0,0.292255857911312,0,0,0.283880170416537,0.534196811001766,0.81443479676788,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.540183282093931,0.129358683782755,0.643011105094777,1.41872186913819,0.535106452806212,0.493647061806363,1.522324745573,0.469343416127421,0,0.441056796109924,0.16488625294148,0.161464426695906,0.301564624640779,0.119372344003136,0,0,0,0.170870880797853,0,0.925972636848558,0,0.546776910884101,0.228778173206523,2.37969801991397,2.51912614182584,2.07299960706636,0,0.632671987162271,0.203319467126849,0.324016022465404,1.04544148007234,0.218362563746178,0.134864346384821,0.165306911450672,0.523511883968059,0.388844919875379,0,12.9649375897364,0.747582730219894,1.65458490457098,0.972255941720238,1.16243841129958,0.675824501963113,1.40828686374905,1.3020438484395,3.04092098834561,5.31485065817213,6.33666013767304,0,0.405450430580328,0.513554785824136,0.649604114888975,0.358053391334963,0.198681354781265,0.600977247599844,0.295379054349154,0.201932899896295,0.304827226619999,0.201652370273681,0.0974578807397524,0.288635524920988,0.116876902181569,0,0.221985953374065,0.269141569828427,0.503653849092235,0.19318959403219,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0.675022500231806,0,0.453142408984205,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.468207537349412,0.320125762024346,0.114870937911227,0,0,0,0,0.294397840268795,0,0.354951612318675,0.715308569841963,0.290692833264657,0.282328141245992,0.169229215783353,0,0.263069711437843,0.543216455383447,1.12228454331548,0.237270036248348,0.29551344712669,0,0.154936841185966,0.578719832943424,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0 | |phase1_expression=0.480446541314382,0,0,0,0.500895729946347,0,0.233612640595526,1.54947988129892,2.25261955442667,1.87251621057595,0.34243593645101,0.239316476986009,1.02720437958723,0.611942816932982,0,0.202475267389826,0,0,0.274228867211478,0,1.7008658030214,1.29078236561151,0.783599367416806,0,0,0,0,0.430942465371778,0,0,0,0,1.23012957516914,0,0,0,0,0.418531630736908,0,0,0,0,0,0.377690453926732,0.202753862439029,0.550640256485045,0.782391344348039,0,0.219686182734472,0.194429899074283,0,1.43752564364972,2.01339127269284,0,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.405017814995072,0.210324961351382,0,0,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0.457438218012048,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0.372798891650601,0.302904773332736,0.226714680320357,0.289864488701678,0,0.679971333707751,0,0.649776417447669,0,0.421333260395256,0.170430322578058,0,0,0.704217098883403,1.28326477414318,0,0,0.649473123033642,1.26679932737549,0.505524445014783,0.45673551887624,0.258937883647172,0,0.346970653532272,0,0.230615497256059,0.452167921657868,0.705532242814229,0.502666365318702,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,2.75574786363617,1.79970819298022,3.30382590389968,0.149790639404823,0,0.376963056338593,0,0,0.20778804455956,0,0.611036183101898,0.248813941220186,0.252722758433675,0,0.260240885925407,0.229902104433473,0.180062129805349,0,1.02054748726992,0.384341160854549,0.749613796477831,0,0.646703978798527,0.378212160335639,0.351902248327898,0.657587197282725,0,0,0,0.398068533636986,1.40442637462647,0.51469581422943,2.27330799516474,0.207125772535502,0.469052119962192,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.350296027101508,0.16455984991348,0.32833492815819,0,0,0,0,0,0.102904612379284,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0.201683524623343,0.667134131534611,0.380451252225118,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.561086559122548,0.252946148497029,0,0.156998727841375,0.370191491765402,0.592905254174298,0.333690211432188,0.196558995113203,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0,0.568474235311454,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0.318909537314974,0,0.345369963731791,0.289298117163023,3.01582567878545,0.54390568381871,0.491764273019036,0.275936746304732,0,0.117211686592203,0.163934945376675,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0,0.292255857911312,0,0,0.283880170416537,0.534196811001766,0.81443479676788,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.540183282093931,0.129358683782755,0.643011105094777,1.41872186913819,0.535106452806212,0.493647061806363,1.522324745573,0.469343416127421,0,0.441056796109924,0.16488625294148,0.161464426695906,0.301564624640779,0.119372344003136,0,0,0,0.170870880797853,0,0.925972636848558,0,0.546776910884101,0.228778173206523,2.37969801991397,2.51912614182584,2.07299960706636,0,0.632671987162271,0.203319467126849,0.324016022465404,1.04544148007234,0.218362563746178,0.134864346384821,0.165306911450672,0.523511883968059,0.388844919875379,0,12.9649375897364,0.747582730219894,1.65458490457098,0.972255941720238,1.16243841129958,0.675824501963113,1.40828686374905,1.3020438484395,3.04092098834561,5.31485065817213,6.33666013767304,0,0.405450430580328,0.513554785824136,0.649604114888975,0.358053391334963,0.198681354781265,0.600977247599844,0.295379054349154,0.201932899896295,0.304827226619999,0.201652370273681,0.0974578807397524,0.288635524920988,0.116876902181569,0,0.221985953374065,0.269141569828427,0.503653849092235,0.19318959403219,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0.675022500231806,0,0.453142408984205,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.468207537349412,0.320125762024346,0.114870937911227,0,0,0,0,0.294397840268795,0,0.354951612318675,0.715308569841963,0.290692833264657,0.282328141245992,0.169229215783353,0,0.263069711437843,0.543216455383447,1.12228454331548,0.237270036248348,0.29551344712669,0,0.154936841185966,0.578719832943424,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0 | ||
|short_description=p3@Top3a | |||
}} | }} |
Latest revision as of 20:08, 1 October 2015
Short description: | p3@Top3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Top3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 38bp_to_ENSMUST00000101115, ENSMUST00000120417_5end |
EntrezGene: | Top3a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.87e-12 | 32 |
hematopoietic oligopotent progenitor cell | 3.87e-12 | 32 |
hematopoietic stem cell | 3.87e-12 | 32 |
hematopoietic multipotent progenitor cell | 3.87e-12 | 32 |
lymphoid lineage restricted progenitor cell | 1.19e-07 | 12 |
connective tissue cell | 1.27e-07 | 46 |
mesenchymal cell | 1.27e-07 | 46 |
motile cell | 3.26e-07 | 54 |
leukocyte | 4.07e-07 | 17 |
nongranular leukocyte | 4.07e-07 | 17 |
lymphocyte | 5.16e-07 | 13 |
common lymphoid progenitor | 5.16e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
testis | 5.20e-12 | 14 |
male reproductive organ | 4.04e-11 | 15 |
male organism | 2.43e-10 | 16 |
male reproductive system | 2.43e-10 | 16 |
external genitalia | 1.18e-09 | 17 |
indifferent external genitalia | 1.18e-09 | 17 |
indifferent gonad | 1.18e-09 | 17 |
gonad | 4.83e-09 | 18 |
gonad primordium | 4.83e-09 | 18 |
connective tissue | 1.27e-07 | 46 |