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FFCP PHASE1:Mm9::chr16:26371867..26371878,-: Difference between revisions

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(Created page with "{{FFCP |id=chr16:26371867..26371878,- |short_description=p3@Cldn1 |description=CAGE_peak_3_at_Cldn1_5end |association_with_transcript=46bp_to_NM_016674,uc007yuz.2_5end |E...")
 
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{{FFCP
{{FFCP
|id=chr16:26371867..26371878,-
|DHSsupport=NA
|short_description=p3@Cldn1
|DPIdataset=NA
|description=CAGE_peak_3_at_Cldn1_5end
|association_with_transcript=46bp_to_NM_016674,uc007yuz.2_5end
|EntrezGene=12737
|EntrezGene=12737
|HGNC=
|HGNC=
|MCL_coexpression_id=3038
|TSSclassifier=NA
|UniProt=O88551,Q4FJV3
|UniProt=O88551,Q4FJV3
|association_with_transcript=46bp_to_NM_016674,uc007yuz.2_5end
|cluster_id=chr16:26371867..26371878,-
|description=CAGE_peak_3_at_Cldn1_5end
|id=chr16:26371867..26371878,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005172!2.04e-15!49;UBERON:0005173!2.04e-15!49;UBERON:0002417!2.04e-15!49;UBERON:0000916!2.04e-15!49;UBERON:0009569!5.32e-15!66;UBERON:0005177!6.35e-12!85;UBERON:0002100!1.66e-10!98;UBERON:0002107!2.25e-10!22;UBERON:0007499!2.25e-10!22;UBERON:0006925!2.25e-10!22;UBERON:0009497!2.25e-10!22;UBERON:0000015!2.25e-10!22;UBERON:0002423!2.25e-10!22;UBERON:0006235!2.25e-10!22;UBERON:0008835!2.25e-10!22;UBERON:0003894!2.25e-10!22;UBERON:0004161!2.25e-10!22;UBERON:0008836!2.25e-10!22;UBERON:0005256!2.71e-10!47;UBERON:0002365!2.90e-10!25;UBERON:0002330!2.90e-10!25;UBERON:0009854!2.27e-09!23;UBERON:0009856!2.27e-09!23;UBERON:0000466!6.68e-08!79;UBERON:0003104!1.21e-07!131;UBERON:0009142!1.21e-07!131
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.88e-18,49;UBERON:0005173,1.88e-18,49;UBERON:0002417,1.88e-18,49;UBERON:0000916,1.88e-18,49;UBERON:0003104,3.71e-15,61;UBERON:0009142,3.71e-15,61;UBERON:0009569,8.51e-15,66;UBERON:0005256,1.56e-13,45;UBERON:0002107,9.70e-12,22;UBERON:0007499,9.70e-12,22;UBERON:0006925,9.70e-12,22;UBERON:0009497,9.70e-12,22;UBERON:0000015,9.70e-12,22;UBERON:0002423,9.70e-12,22;UBERON:0006235,9.70e-12,22;UBERON:0008835,9.70e-12,22;UBERON:0003894,9.70e-12,22;UBERON:0004161,9.70e-12,22;UBERON:0008836,9.70e-12,22;UBERON:0002365,4.23e-11,25;UBERON:0002330,4.23e-11,25;UBERON:0009854,6.99e-11,23;UBERON:0009856,6.99e-11,23;UBERON:0005177,4.24e-10,79;UBERON:0002100,6.11e-10,90;UBERON:0001008,1.11e-07,19;UBERON:0002113,3.97e-07,14;UBERON:0003918,3.97e-07,14;UBERON:0011143,3.97e-07,14;UBERON:0005095,3.97e-07,14;UBERON:0007687,3.97e-07,14;UBERON:0006554,4.93e-07,18
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.62622750694888,5.4693474116666,6.80580867165938,7.64700934440319,6.14740936462601,5.34061388334269,0,0.101376931219515,0,3.9119567217402,0,2.85592037554813,4.27745777963423,1.95980990275508,1.43752564364972,0,0,0,0,0,0,0,0,0,0.677689064138264,1.77858959222228,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.711858403995515,0.931997229126503,0,0.226714680320357,0,4.30211938490693,8.83962733820076,9.17495425784289,10.3964226791627,5.37632264516803,2.10666630197628,0,0,0,0.422530259330042,0,0,0,0.432982082022428,0.253359865475099,0,1.37020655662872,0.776813650941515,1.33597925158342,1.21439728736295,4.56698217468212,3.22861696158482,3.76806601381556,4.58595957829249,1.88499886994513,11.3709685157812,1.3013942122792,1.76922110389975,0.485300549842228,0,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0,0.457500602818626,0,0.347648640384553,0.511430914660661,0.20778804455956,0,7.94347038032467,2.48813941220186,4.80173241023982,0.420883711772948,0.780722657776222,0.459804208866946,1.26043490863744,0.90422890701429,1.42876648217788,1.5373646434182,0.749613796477831,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0.657587197282725,5.28289773528636,5.92028683087683,8.64284972913362,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0,0.233530684734339,0,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0.630869845692382,3.70456604565424,0,0.264450566663544,0.639864751605702,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,1.14135375667535,0,0.164698954724011,0,0.397912944082302,0,0,0,0,1.13800740571849,2.51346727741403,2.25415471346161,3.25842124552503,3.29719228184964,3.85747009396752,1.45444035385792,2.65698266363284,3.45397201251025,3.08492909804501,2.07516838961004,0.667380422864376,0.982794975566015,1.57403478669398,2.84004169943904,7.95884627182976,12.9859184408524,12.083237772934,6.48540907100142,9.88421087477093,11.5014565221884,16.3742016974142,15.9139213288426,10.6083128737787,12.7372163600558,13.9908621195376,1.84753190166605,0.189491411770485,0.651859905768103,0.848725428875941,1.17345124144251,1.84256883185997,2.38043640886014,0.780534591431195,1.10344600874334,1.10732344824387,0.797273843287435,1.3109065177259,1.03610989119537,0.867894351489069,0,0,1.47529281905711,0.551873492609465,0.321101179975584,0.234423373184406,0,1.51482556322624,0,0,0,0,0,0.283076530788832,0,0,0.395287777946524,0,2.6968616189571,1.42452482933804,3.25773918707152,7.9185659026817,0,0.728341908464944,0.302323556964751,0,0.885905678642318,0.307435147943927,0.775284879504663,0.363533729477506,1.06949213515416,0.316036757935816,0,0,0,0,0.258717367565509,0,0.354680467284547,0.356737635204141,1.48094118541909,1.8267896946876,12.6722722354404,5.93129798418696,0.220528398054962,11.3771514529621,23.0894130175145,15.3194829317516,23.9938411446304,28.2322347561505,0,0.927126510052548,0.170870880797853,2.47664241555867,2.40752885580625,0.376736914009382,0,0,0,0,0,0.954670618015114,0.158167996790568,0.813277868507395,0.756037385752609,0.418176592028937,2.83871332870031,3.10187996685088,3.05817786183743,2.09404753587224,0.388844919875379,1.24267862617385,0,0.299033092087958,0.496375471371293,2.13896307178452,1.42075805825504,3.04121025883401,2.69921648885234,2.21347454234715,1.67774951081137,0.241584120826006,0,0.948033361884535,0.608175645870493,0.102710957164827,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0.590758108698309,0.201932899896295,0.304827226619999,0.201652370273681,0.487289403698762,0.192423683280659,0.350630706544707,5.21479882314986,0,0,0,0.772758376128762,9.19644129710792,0.73260649706906,7.71726164684637,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.31136204275253,1.59609949360412,0.512200817262403,3.40349403895612,0.838452650511929,1.2869045591501,4.4449345560323,1.23621034343337,3.20919209591815,1.51618327058278,3.54871019846336,1.69763707247469,1.96647165686753,0.89635213366817,1.83793500657962,4.28664322154766,1.39061191133827,1.54327376370964,2.47251540481984,1.03039244094078,0.685738504770831,1.4198064492747,1.1921809497366,2.47088908274958,2.07040636913727,1.35383372626682,1.64635175585495,2.10455769150274,1.7654534799962,1.12228454331548,2.25406534435931,0.985044823755635,2.04615521584845,1.70430525304563,3.2794123866794,3.99696924700713,7.48581147025307,9.45432637812513,2.29545998482612,3.75005412503176,1.39120701372253
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.62622750694888,5.4693474116666,6.80580867165938,7.64700934440319,6.14740936462601,5.34061388334269,0,0.101376931219515,0,3.9119567217402,0,2.85592037554813,4.27745777963423,1.95980990275508,1.43752564364972,0,0,0,0,0,0,0,0,0,0.677689064138264,1.77858959222228,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.711858403995515,0.931997229126503,0,0.226714680320357,0,4.30211938490693,8.83962733820076,9.17495425784289,10.3964226791627,5.37632264516803,2.10666630197628,0,0,0,0.422530259330042,0,0,0,0.432982082022428,0.253359865475099,0,1.37020655662872,0.776813650941515,1.33597925158342,1.21439728736295,4.56698217468212,3.22861696158482,3.76806601381556,4.58595957829249,1.88499886994513,11.3709685157812,1.3013942122792,1.76922110389975,0.485300549842228,0,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0,0.457500602818626,0,0.347648640384553,0.511430914660661,0.20778804455956,0,7.94347038032467,2.48813941220186,4.80173241023982,0.420883711772948,0.780722657776222,0.459804208866946,1.26043490863744,0.90422890701429,1.42876648217788,1.5373646434182,0.749613796477831,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0.657587197282725,5.28289773528636,5.92028683087683,8.64284972913362,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0,0.233530684734339,0,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0.630869845692382,3.70456604565424,0,0.264450566663544,0.639864751605702,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,1.14135375667535,0,0.164698954724011,0,0.397912944082302,0,0,0,0,1.13800740571849,2.51346727741403,2.25415471346161,3.25842124552503,3.29719228184964,3.85747009396752,1.45444035385792,2.65698266363284,3.45397201251025,3.08492909804501,2.07516838961004,0.667380422864376,0.982794975566015,1.57403478669398,2.84004169943904,7.95884627182976,12.9859184408524,12.083237772934,6.48540907100142,9.88421087477093,11.5014565221884,16.3742016974142,15.9139213288426,10.6083128737787,12.7372163600558,13.9908621195376,1.84753190166605,0.189491411770485,0.651859905768103,0.848725428875941,1.17345124144251,1.84256883185997,2.38043640886014,0.780534591431195,1.10344600874334,1.10732344824387,0.797273843287435,1.3109065177259,1.03610989119537,0.867894351489069,0,0,1.47529281905711,0.551873492609465,0.321101179975584,0.234423373184406,0,1.51482556322624,0,0,0,0,0,0.283076530788832,0,0,0.395287777946524,0,2.6968616189571,1.42452482933804,3.25773918707152,7.9185659026817,0,0.728341908464944,0.302323556964751,0,0.885905678642318,0.307435147943927,0.775284879504663,0.363533729477506,1.06949213515416,0.316036757935816,0,0,0,0,0.258717367565509,0,0.354680467284547,0.356737635204141,1.48094118541909,1.8267896946876,12.6722722354404,5.93129798418696,0.220528398054962,11.3771514529621,23.0894130175145,15.3194829317516,23.9938411446304,28.2322347561505,0,0.927126510052548,0.170870880797853,2.47664241555867,2.40752885580625,0.376736914009382,0,0,0,0,0,0.954670618015114,0.158167996790568,0.813277868507395,0.756037385752609,0.418176592028937,2.83871332870031,3.10187996685088,3.05817786183743,2.09404753587224,0.388844919875379,1.24267862617385,0,0.299033092087958,0.496375471371293,2.13896307178452,1.42075805825504,3.04121025883401,2.69921648885234,2.21347454234715,1.67774951081137,0.241584120826006,0,0.948033361884535,0.608175645870493,0.102710957164827,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0.590758108698309,0.201932899896295,0.304827226619999,0.201652370273681,0.487289403698762,0.192423683280659,0.350630706544707,5.21479882314986,0,0,0,0.772758376128762,9.19644129710792,0.73260649706906,7.71726164684637,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.31136204275253,1.59609949360412,0.512200817262403,3.40349403895612,0.838452650511929,1.2869045591501,4.4449345560323,1.23621034343337,3.20919209591815,1.51618327058278,3.54871019846336,1.69763707247469,1.96647165686753,0.89635213366817,1.83793500657962,4.28664322154766,1.39061191133827,1.54327376370964,2.47251540481984,1.03039244094078,0.685738504770831,1.4198064492747,1.1921809497366,2.47088908274958,2.07040636913727,1.35383372626682,1.64635175585495,2.10455769150274,1.7654534799962,1.12228454331548,2.25406534435931,0.985044823755635,2.04615521584845,1.70430525304563,3.2794123866794,3.99696924700713,7.48581147025307,9.45432637812513,2.29545998482612,3.75005412503176,1.39120701372253
|short_description=p3@Cldn1
}}
}}

Latest revision as of 20:14, 1 October 2015

Short description:p3@Cldn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cldn1_5end
Coexpression cluster:MCL_coexpression_mm9:3038
Association with transcript: 46bp_to_NM_016674, uc007yuz.2_5end
EntrezGene:Cldn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cldn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G89.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.17
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C14.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A811.37
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.94
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.49
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B58.64
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G13.70
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F82.51
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G73.86
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I12.66
kidney, neonate N25.CNhs11122.1353-25F33.45
kidney, neonate N30.CNhs11203.1385-42H13.08
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F57.96
liver, embryo E17.CNhs10510.481-18A312.99
liver, embryo E18.CNhs10579.499-43G412.08
liver, neonate N00.CNhs11117.641-24F46.49
liver, neonate N03.CNhs11123.1345-25G29.88
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H216.37
liver, neonate N10.CNhs11115.751-24B915.91
liver, neonate N20.CNhs11220.823-25A310.61
liver, neonate N25.CNhs11198.1368-26H112.74
liver, neonate N30.CNhs11106.1382-42D113.99
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I72.70
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G67.92
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I712.67
placenta, adult pregnant day17.CNhs10464.577-18G35.93
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C311.38
skin, neonate N00.CNhs11124.650-25G423.09
skin, neonate N03.CNhs11215.662-22H315.32
skin, neonate N06.CNhs11097.693-20I523.99
skin, neonate N10.CNhs11108.762-6C428.23
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B83.10
stomach, neonate N07.CNhs11210.718-18A93.06
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B72.70
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F59.20
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D57.72
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C29.45
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
abdomen element1.88e-1849
abdominal segment element1.88e-1849
abdominal segment of trunk1.88e-1849
abdomen1.88e-1849
mesenchyme3.71e-1561
entire embryonic mesenchyme3.71e-1561
subdivision of trunk8.51e-1566
trunk mesenchyme1.56e-1345
liver9.70e-1222
epithelial sac9.70e-1222
digestive gland9.70e-1222
epithelium of foregut-midgut junction9.70e-1222
anatomical boundary9.70e-1222
hepatobiliary system9.70e-1222
foregut-midgut junction9.70e-1222
hepatic diverticulum9.70e-1222
liver primordium9.70e-1222
septum transversum9.70e-1222
liver bud9.70e-1222
exocrine gland4.23e-1125
exocrine system4.23e-1125
digestive tract diverticulum6.99e-1123
sac6.99e-1123
trunk region element4.24e-1079
trunk6.11e-1090
renal system1.11e-0719
kidney3.97e-0714
kidney mesenchyme3.97e-0714
upper urinary tract3.97e-0714
kidney rudiment3.97e-0714
kidney field3.97e-0714
urinary system structure4.93e-0718
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