FFCP PHASE1:Mm9::chr13:64263170..64263218,+: Difference between revisions
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{{FFCP|EntrezGene=56541|HGNC=|MCL_coexpression_id=1|UniProt=E9QKB2,Q3UJC1,Q9JKS5|association_with_transcript=0bp_to_ENSMUST00000021929,NM_019986,uc011zaz.1_5end|description=CAGE_peak_1_at_Habp4_5end|id=chr13:64263170..64263218,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!3.48e-16!122;UBERON:0000025!1.72e-15!114;UBERON:0000468!1.31e-10!333;UBERON:0000033!5.40e-08!63;UBERON:0000062!6.11e-08!269;UBERON:0002021!1.36e-07!10;UBERON:0000411!1.36e-07!10;UBERON:0001950!1.36e-07!10;UBERON:0003914!1.90e-07!47;UBERON:0000922!2.41e-07!328;UBERON:0000955!7.03e-07!50;UBERON:0006238!7.03e-07!50;UBERON:0000479!9.58e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0004111,4.02e-16,122;UBERON:0000025,1.99e-15,114;UBERON:0010314,1.51e-09,92;UBERON:0002021,1.36e-07,10;UBERON:0000411,1.36e-07,10;UBERON:0001950,1.36e-07,10;UBERON:0003914,1.90e-07,47;UBERON:0000479,8.49e-07,349|phase1_expression=14.4133962394315,0.697950815278722,0,4.83942738090928,0.500895729946347,1.51091344720701,1.16806320297763,3.74457637980571,1.40788722151667,1.63845168425395,2.73948749160808,1.43589886191606,7.87523357683546,4.10875891369288,3.99731714178795,3.03712901084739,5.59649502502517,3.47008381894061,5.75880621144103,6.36584477697045,9.77997836737302,2.38298282882125,1.56719873483361,1.11994695955385,0.68822784320151,0.57423196411502,0.86152399231815,0.430942465371778,0.950117097281869,1.26015064879965,0.221730510655305,1.90509202037889,1.84519436275371,0,5.48818077527422,4.48833542467929,5.3084032628216,1.67412652294763,3.906676722619,0.523523743973798,0.588231488031014,2.73218193983378,0,3.65100772129174,4.25783111121961,3.30384153891027,0.782391344348039,6.32272953503295,4.39372365468944,5.8328969722285,2.51975558925653,4.31257693094915,2.85230430298152,5.80289713609076,6.04968838456435,1.54355661621568,2.86533439938757,6.18806510732931,2.02316460859598,6.87688273053643,2.53532561402472,1.35537812827653,2.66788438833342,1.7997994345628,0,5.6838409195688,2.99600110518405,7.30014780110954,1.03689612308478,1.62007125998029,0.630974884054146,11.1403883917483,10.1599528837742,1.34739879136449,0.862609239164127,1.83843757322004,25.3266526298594,27.9635270406561,22.8873734551803,2.2420668914133,2.28719109006024,3.64639359389732,27.080750903134,23.0732670112989,23.3781319098519,12.0797720044204,9.5389026135399,5.03278503728312,2.49896437999507,2.34271836331035,4.92769630792852,25.8127163094416,9.51959867190851,11.3337670243942,50.0327841434705,49.2829575807069,6.31999890592883,4.26075806445144,3.11743205523443,4.59341446863442,6.05626705039726,6.41632387071589,0,0,3.68034769719064,6.33399663687746,4.04419556011827,7.07940054258172,7.25026074212081,21.5241101643996,8.84775166507293,9.74289530598852,7.84092690670599,8.44046787094686,13.2875239063346,15.3313241422204,6.92145909656247,13.7369389073916,4.42305275974937,15.5296175949513,11.7046004784009,5.33362778448744,11.1835056730873,39.8181883935704,41.6798946558776,6.38642638021478,1.43778149407104,1.79970819298022,2.03312363316904,123.427486869574,92.4151217693626,16.5863744788981,107.423429878827,108.934784822721,97.2448048538741,78.0380475355914,19.7568365869614,8.8328949133166,10.867078612648,12.8369532090749,11.5807194236806,11.0353010128067,12.0641626969584,14.0155480587215,18.9821832632205,17.6796933993093,16.585205247072,31.8205146008989,6.89817577385095,9.26619792822314,9.67731182901719,10.7405908889512,10.0097009721215,9.75106066262066,10.2891068203972,9.35461054046918,0.702213187313235,0.51469581422943,2.55747149456033,23.8194638415827,28.1431271977315,31.6909228171386,29.1196024769809,36.9916755685119,36.5613057543086,49.7622641765873,48.5574856533311,47.9905557129067,51.0135534731789,40.7135310916156,43.3718131070328,34.2107970575278,41.2754216747175,33.2831918525722,65.1898840548794,17.1850702673405,13.8775888853195,1.32225283331772,9.59797127408553,9.28946687441754,8.76298736990235,8.47070803418039,6.0042071838115,4.1849637744763,8.54152310780121,8.72904460037258,8.04272668160862,11.937388322469,11.307917052909,9.88701349519644,9.51007419448655,9.35963984295526,9.48339504765408,13.2528274627285,13.5249282807697,17.9213168503877,19.3952487167626,27.1425622975533,28.1402590202945,37.4929775868189,35.9527086756748,32.5768512753553,54.8437360111225,6.67380422864376,8.84515478009414,8.31989815823959,14.2002084971952,12.7823894668781,16.0414286622294,10.0693648107784,15.0785760900783,20.8666674022942,24.4405951096503,38.3305176098558,47.7417639865278,39.1497260818023,43.0553792452589,38.113038187706,17.1820466854942,12.127450353311,13.6890580211302,12.5611363473639,13.1426539041561,9.21284415929987,8.56957107189649,19.7084984336377,17.6551361398934,14.1737401375216,18.1778436269535,17.3695113598682,19.1680329871144,21.1187625529007,3.01582567878545,1.08781136763742,5.90117127622843,4.69092468718045,120.252391900856,110.530620456448,3.11476396215683,21.7124997395761,1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56541 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=E9QKB2,Q3UJC1,Q9JKS5 | |||
|association_with_transcript=0bp_to_ENSMUST00000021929,NM_019986,uc011zaz.1_5end | |||
|cluster_id=chr13:64263170..64263218,+ | |||
|description=CAGE_peak_1_at_Habp4_5end | |||
|id=chr13:64263170..64263218,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!3.48e-16!122;UBERON:0000025!1.72e-15!114;UBERON:0000468!1.31e-10!333;UBERON:0000033!5.40e-08!63;UBERON:0000062!6.11e-08!269;UBERON:0002021!1.36e-07!10;UBERON:0000411!1.36e-07!10;UBERON:0001950!1.36e-07!10;UBERON:0003914!1.90e-07!47;UBERON:0000922!2.41e-07!328;UBERON:0000955!7.03e-07!50;UBERON:0006238!7.03e-07!50;UBERON:0000479!9.58e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,4.02e-16,122;UBERON:0000025,1.99e-15,114;UBERON:0010314,1.51e-09,92;UBERON:0002021,1.36e-07,10;UBERON:0000411,1.36e-07,10;UBERON:0001950,1.36e-07,10;UBERON:0003914,1.90e-07,47;UBERON:0000479,8.49e-07,349 | |||
|phase1_expression=14.4133962394315,0.697950815278722,0,4.83942738090928,0.500895729946347,1.51091344720701,1.16806320297763,3.74457637980571,1.40788722151667,1.63845168425395,2.73948749160808,1.43589886191606,7.87523357683546,4.10875891369288,3.99731714178795,3.03712901084739,5.59649502502517,3.47008381894061,5.75880621144103,6.36584477697045,9.77997836737302,2.38298282882125,1.56719873483361,1.11994695955385,0.68822784320151,0.57423196411502,0.86152399231815,0.430942465371778,0.950117097281869,1.26015064879965,0.221730510655305,1.90509202037889,1.84519436275371,0,5.48818077527422,4.48833542467929,5.3084032628216,1.67412652294763,3.906676722619,0.523523743973798,0.588231488031014,2.73218193983378,0,3.65100772129174,4.25783111121961,3.30384153891027,0.782391344348039,6.32272953503295,4.39372365468944,5.8328969722285,2.51975558925653,4.31257693094915,2.85230430298152,5.80289713609076,6.04968838456435,1.54355661621568,2.86533439938757,6.18806510732931,2.02316460859598,6.87688273053643,2.53532561402472,1.35537812827653,2.66788438833342,1.7997994345628,0,5.6838409195688,2.99600110518405,7.30014780110954,1.03689612308478,1.62007125998029,0.630974884054146,11.1403883917483,10.1599528837742,1.34739879136449,0.862609239164127,1.83843757322004,25.3266526298594,27.9635270406561,22.8873734551803,2.2420668914133,2.28719109006024,3.64639359389732,27.080750903134,23.0732670112989,23.3781319098519,12.0797720044204,9.5389026135399,5.03278503728312,2.49896437999507,2.34271836331035,4.92769630792852,25.8127163094416,9.51959867190851,11.3337670243942,50.0327841434705,49.2829575807069,6.31999890592883,4.26075806445144,3.11743205523443,4.59341446863442,6.05626705039726,6.41632387071589,0,0,3.68034769719064,6.33399663687746,4.04419556011827,7.07940054258172,7.25026074212081,21.5241101643996,8.84775166507293,9.74289530598852,7.84092690670599,8.44046787094686,13.2875239063346,15.3313241422204,6.92145909656247,13.7369389073916,4.42305275974937,15.5296175949513,11.7046004784009,5.33362778448744,11.1835056730873,39.8181883935704,41.6798946558776,6.38642638021478,1.43778149407104,1.79970819298022,2.03312363316904,123.427486869574,92.4151217693626,16.5863744788981,107.423429878827,108.934784822721,97.2448048538741,78.0380475355914,19.7568365869614,8.8328949133166,10.867078612648,12.8369532090749,11.5807194236806,11.0353010128067,12.0641626969584,14.0155480587215,18.9821832632205,17.6796933993093,16.585205247072,31.8205146008989,6.89817577385095,9.26619792822314,9.67731182901719,10.7405908889512,10.0097009721215,9.75106066262066,10.2891068203972,9.35461054046918,0.702213187313235,0.51469581422943,2.55747149456033,23.8194638415827,28.1431271977315,31.6909228171386,29.1196024769809,36.9916755685119,36.5613057543086,49.7622641765873,48.5574856533311,47.9905557129067,51.0135534731789,40.7135310916156,43.3718131070328,34.2107970575278,41.2754216747175,33.2831918525722,65.1898840548794,17.1850702673405,13.8775888853195,1.32225283331772,9.59797127408553,9.28946687441754,8.76298736990235,8.47070803418039,6.0042071838115,4.1849637744763,8.54152310780121,8.72904460037258,8.04272668160862,11.937388322469,11.307917052909,9.88701349519644,9.51007419448655,9.35963984295526,9.48339504765408,13.2528274627285,13.5249282807697,17.9213168503877,19.3952487167626,27.1425622975533,28.1402590202945,37.4929775868189,35.9527086756748,32.5768512753553,54.8437360111225,6.67380422864376,8.84515478009414,8.31989815823959,14.2002084971952,12.7823894668781,16.0414286622294,10.0693648107784,15.0785760900783,20.8666674022942,24.4405951096503,38.3305176098558,47.7417639865278,39.1497260818023,43.0553792452589,38.113038187706,17.1820466854942,12.127450353311,13.6890580211302,12.5611363473639,13.1426539041561,9.21284415929987,8.56957107189649,19.7084984336377,17.6551361398934,14.1737401375216,18.1778436269535,17.3695113598682,19.1680329871144,21.1187625529007,3.01582567878545,1.08781136763742,5.90117127622843,4.69092468718045,120.252391900856,110.530620456448,3.11476396215683,21.7124997395761,1.89304931649754,1.95219372148319,3.01592756825919,0.477937595905104,2.89638276307112,1.98153571552183,2.83367491172426,2.33804686329049,2.37172666767914,63.9429419679396,14.1940085208269,15.6697731227185,18.8948872850148,13.6925202067204,3.98235415019888,10.9251286269742,12.09294227859,12.0707251043775,10.6308681437078,7.07100840271033,11.62927319257,8.36127577798263,13.1904030002347,11.6933600436252,13.7044191147498,7.21948802737308,30.2991249120871,14.2248264284735,17.0753462593236,11.7885369267376,10.8177542521787,11.9507107793387,12.8348236069654,17.3545020995322,5.39744928546534,8.26145076368899,18.5243854366168,12.696241476494,17.115229229766,11.8816462108467,9.66915986425405,5.9090723908222,9.91034844541493,137.400148789788,4.61351378154202,8.46186158649212,5.92622487583077,5.83942216714542,4.64760374251486,4.57556346413045,4.07948231985253,4.75834937900437,3.17859939750175,4.77335309007557,12.3371037496643,8.3360981522008,9.07244862903131,10.4544148007234,10.4814030598165,13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| |||
|short_description=p1@Habp4 | |||
}} |
Latest revision as of 21:08, 1 October 2015
Short description: | p1@Habp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Habp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000021929, NM_019986, uc011zaz.1_5end |
EntrezGene: | Habp4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 4.02e-16 | 122 |
tube | 1.99e-15 | 114 |
structure with developmental contribution from neural crest | 1.51e-09 | 92 |
occipital lobe | 1.36e-07 | 10 |
visual cortex | 1.36e-07 | 10 |
neocortex | 1.36e-07 | 10 |
epithelial tube | 1.90e-07 | 47 |
tissue | 8.49e-07 | 349 |