FFCP PHASE1:Mm9::chr19:11092423..11092470,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76002 | |EntrezGene=76002 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NM_001251849,uc008grm.1_5end | |association_with_transcript=0bp_to_NM_001251849,uc008grm.1_5end | ||
|cluster_id=chr19:11092423..11092470,- | |||
|description=CAGE_peak_1_at_Ms4a18_5end | |description=CAGE_peak_1_at_Ms4a18_5end | ||
|id=chr19:11092423..11092470,- | |id=chr19:11092423..11092470,- | ||
|ontology_enrichment_celltype=CL:0002563!2.38e-10!9;CL:0002251!2.38e-10!9;CL:0000075!4.02e-08!7;CL:0000239!8.76e-08!6;CL:0000677!8.76e-08!6;CL:0000212!8.76e-08!6;CL:0000584!8.76e-08!6 | |ontology_enrichment_celltype=CL:0002563!2.38e-10!9;CL:0002251!2.38e-10!9;CL:0000075!4.02e-08!7;CL:0000239!8.76e-08!6;CL:0000677!8.76e-08!6;CL:0000212!8.76e-08!6;CL:0000584!8.76e-08!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.95e-15,9;CL:0002251,5.95e-15,9;CL:0000239,4.77e-11,6;CL:0000677,4.77e-11,6;CL:0000584,4.77e-11,6;CL:0000075,2.47e-09,7;CL:0002076,3.44e-08,15;CL:0000066,5.07e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.14e-21!43;UBERON:0005409!5.53e-20!59;UBERON:0000344!5.88e-17!15;UBERON:0001242!9.26e-15!13;UBERON:0000060!9.26e-15!13;UBERON:0001262!9.26e-15!13;UBERON:0004786!9.26e-15!13;UBERON:0000485!3.97e-11!11;UBERON:0003350!2.38e-10!9;UBERON:0004808!2.38e-10!9;UBERON:0001277!2.38e-10!9;UBERON:0004923!1.14e-08!24;UBERON:0001007!7.18e-08!128;UBERON:0001555!7.18e-08!128;UBERON:0007026!7.18e-08!128;UBERON:0004119!1.51e-07!130;UBERON:0000925!1.51e-07!130;UBERON:0006595!1.51e-07!130;UBERON:0004921!7.36e-07!126;UBERON:0004185!7.36e-07!126 | |ontology_enrichment_uberon=UBERON:0000160!4.14e-21!43;UBERON:0005409!5.53e-20!59;UBERON:0000344!5.88e-17!15;UBERON:0001242!9.26e-15!13;UBERON:0000060!9.26e-15!13;UBERON:0001262!9.26e-15!13;UBERON:0004786!9.26e-15!13;UBERON:0000485!3.97e-11!11;UBERON:0003350!2.38e-10!9;UBERON:0004808!2.38e-10!9;UBERON:0001277!2.38e-10!9;UBERON:0004923!1.14e-08!24;UBERON:0001007!7.18e-08!128;UBERON:0001555!7.18e-08!128;UBERON:0007026!7.18e-08!128;UBERON:0004119!1.51e-07!130;UBERON:0000925!1.51e-07!130;UBERON:0006595!1.51e-07!130;UBERON:0004921!7.36e-07!126;UBERON:0004185!7.36e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.18e-45,31;UBERON:0005409,5.91e-35,47;UBERON:0000344,4.90e-25,15;UBERON:0001242,1.12e-21,13;UBERON:0001262,1.12e-21,13;UBERON:0004786,1.12e-21,13;UBERON:0003350,5.95e-15,9;UBERON:0004808,5.95e-15,9;UBERON:0001277,5.95e-15,9;UBERON:0004923,4.34e-14,24;UBERON:0000485,7.17e-12,11;UBERON:0001007,9.25e-11,116;UBERON:0001555,9.25e-11,116;UBERON:0007026,9.25e-11,116;UBERON:0004119,2.00e-10,118;UBERON:0000925,2.00e-10,118;UBERON:0006595,2.00e-10,118;UBERON:0004921,3.11e-09,114;UBERON:0002108,1.42e-08,4;UBERON:0000331,9.11e-07,3;UBERON:0002116,9.11e-07,3;UBERON:0001204,9.11e-07,3;UBERON:0001168,9.11e-07,3 | |||
|phase1_expression=0.320297694209588,87.5928273174796,67.3398874296513,54.4435580352294,63.6137577031861,22.3279431642813,27.3326789496765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.0766811835121,54.5994088939865,71.2047635502625,59.0143934737932,68.3043807614268,116.86440296567,105.348594239651,27.9380443425684,0,0,0,7.79899373328441,12.9663023379624,8.37094360675713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,18.6119723942068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,102.182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.7202031664446,75.8973126324372,0,0,22.1652033474001,32.8744145136048,26.2406091736947,26.0609107774206,82.0935276472005,45.786309413275,42.2243150784453,49.7391180102877,45.0367041245168,83.5902050048426,73.9192130571454,72.0891409180809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0.302323556964751,0,0,0,14.9888410037568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,85.986846805806,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,3.99619761040665,1.04544148007234,1.74690050996942,0.134864346384821,0.41326727862668,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0.316011120628178,0,0,0,0,0,0.240390899039938,0.147689527174577,0,0,0.201652370273681,0.194915761479505,0.192423683280659,0.584384510907845,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972426868273176,0,0.551530525350042,0.44449345560323,0.618105171716683,0.962757628775446,0.505394423527595,0.760437899670719,1.50901073108861,0.37456602987953,1.34452820050225,1.32101578597911,2.38146845641537,0.695305955669133,0.38581844092741,2.06042950401653,0.588795680537589,0.342869252385415,1.4198064492747,0.953744759789284,1.45346416632329,0.846984423737976,1.4384483341585,1.46342378298218,1.31534855718921,0.950628796921032,0,0.593175090620871,0.29551344712669,0.409231043169689,1.23949472948773,0.192906610981141,0,1.87145286756327,3.00819475667618,0,0,0 | |phase1_expression=0.320297694209588,87.5928273174796,67.3398874296513,54.4435580352294,63.6137577031861,22.3279431642813,27.3326789496765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.0766811835121,54.5994088939865,71.2047635502625,59.0143934737932,68.3043807614268,116.86440296567,105.348594239651,27.9380443425684,0,0,0,7.79899373328441,12.9663023379624,8.37094360675713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,18.6119723942068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,102.182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.7202031664446,75.8973126324372,0,0,22.1652033474001,32.8744145136048,26.2406091736947,26.0609107774206,82.0935276472005,45.786309413275,42.2243150784453,49.7391180102877,45.0367041245168,83.5902050048426,73.9192130571454,72.0891409180809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0.302323556964751,0,0,0,14.9888410037568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,85.986846805806,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,3.99619761040665,1.04544148007234,1.74690050996942,0.134864346384821,0.41326727862668,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0.316011120628178,0,0,0,0,0,0.240390899039938,0.147689527174577,0,0,0.201652370273681,0.194915761479505,0.192423683280659,0.584384510907845,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972426868273176,0,0.551530525350042,0.44449345560323,0.618105171716683,0.962757628775446,0.505394423527595,0.760437899670719,1.50901073108861,0.37456602987953,1.34452820050225,1.32101578597911,2.38146845641537,0.695305955669133,0.38581844092741,2.06042950401653,0.588795680537589,0.342869252385415,1.4198064492747,0.953744759789284,1.45346416632329,0.846984423737976,1.4384483341585,1.46342378298218,1.31534855718921,0.950628796921032,0,0.593175090620871,0.29551344712669,0.409231043169689,1.23949472948773,0.192906610981141,0,1.87145286756327,3.00819475667618,0,0,0 | ||
|short_description=p1@Ms4a18 | |short_description=p1@Ms4a18 | ||
}} | }} |
Latest revision as of 21:19, 1 October 2015
Short description: | p1@Ms4a18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ms4a18_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_NM_001251849, uc008grm.1_5end |
EntrezGene: | Ms4a18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.95e-15 | 9 |
epithelial cell of alimentary canal | 5.95e-15 | 9 |
brush border epithelial cell | 4.77e-11 | 6 |
gut absorptive cell | 4.77e-11 | 6 |
enterocyte | 4.77e-11 | 6 |
columnar/cuboidal epithelial cell | 2.47e-09 | 7 |
endo-epithelial cell | 3.44e-08 | 15 |
epithelial cell | 5.07e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.18e-45 | 31 |
gastrointestinal system | 5.91e-35 | 47 |
mucosa | 4.90e-25 | 15 |
intestinal mucosa | 1.12e-21 | 13 |
wall of intestine | 1.12e-21 | 13 |
gastrointestinal system mucosa | 1.12e-21 | 13 |
epithelium of mucosa | 5.95e-15 | 9 |
gastrointestinal system epithelium | 5.95e-15 | 9 |
intestinal epithelium | 5.95e-15 | 9 |
organ component layer | 4.34e-14 | 24 |
simple columnar epithelium | 7.17e-12 | 11 |
digestive system | 9.25e-11 | 116 |
digestive tract | 9.25e-11 | 116 |
primitive gut | 9.25e-11 | 116 |
endoderm-derived structure | 2.00e-10 | 118 |
endoderm | 2.00e-10 | 118 |
presumptive endoderm | 2.00e-10 | 118 |
subdivision of digestive tract | 3.11e-09 | 114 |
small intestine | 1.42e-08 | 4 |
ileal mucosa | 9.11e-07 | 3 |
ileum | 9.11e-07 | 3 |
mucosa of small intestine | 9.11e-07 | 3 |
wall of small intestine | 9.11e-07 | 3 |