FFCP PHASE1:Mm9::chr5:124802266..124802311,-: Difference between revisions
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{{FFCP|EntrezGene=13445|HGNC=|MCL_coexpression_id=1241|UniProt=F2Z4B3|association_with_transcript=-24bp_to_ENSMUST00000111472_5end|description=CAGE_peak_2_at_Cdk2ap1_5end|id=chr5:124802266..124802311,-|ontology_enrichment_celltype=CL:0000055!5.33e-18!50;CL:0000221!8.41e-17!44;CL:0000133!8.41e-17!44;CL:0002319!2.69e-16!43;CL:0000393!1.92e-15!39;CL:0000211!1.92e-15!39;CL:0000540!9.55e-13!33;CL:0000047!9.55e-13!33;CL:0000031!9.55e-13!33;CL:0000404!9.55e-13!33;CL:0002321!2.78e-12!70;CL:0000220!2.78e-12!70;CL:0000107!4.34e-07!9;CL:0000117!4.81e-07!23;CL:0000337!4.81e-07!23|ontology_enrichment_celltype_v019_2=CL:0000221,4.17e-18,44;CL:0000133,4.17e-18,44;CL:0002319,1.46e-17,43;CL:0000393,1.19e-16,39;CL:0000211,1.19e-16,39;CL:0002321,4.85e-14,70;CL:0000540,9.41e-14,33;CL:0000047,9.41e-14,33;CL:0000031,9.41e-14,33;CL:0000404,9.41e-14,33;CL:0000117,1.31e-07,23;CL:0000337,1.31e-07,23;CL:0000107,1.73e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.00e-12!102;UBERON:0000924!2.00e-12!102;UBERON:0006601!2.00e-12!102;UBERON:0000073!6.78e-11!75;UBERON:0001016!6.78e-11!75;UBERON:0001017!2.34e-10!73;UBERON:0005743!2.34e-10!73;UBERON:0002346!1.21e-07!71;UBERON:0003075!1.21e-07!71;UBERON:0007284!1.21e-07!71;UBERON:0000010!1.99e-07!11;UBERON:0002410!4.34e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.36e-11,95;UBERON:0000924,4.36e-11,95;UBERON:0006601,4.36e-11,95;UBERON:0001016,2.32e-10,75;UBERON:0001017,8.31e-10,73;UBERON:0000010,7.50e-08,11;UBERON:0002410,1.73e-07,9|phase1_expression=5.12476310735341,0,0,0,0,3.02182689441402,2.33612640595526,0,0.281577444303333,0.936258105287974,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.255129870453209,2.87943758482567,4.96279599363977,0.639969691173627,0.45881856213434,0.57423196411502,0,2.37018355954478,0.950117097281869,1.76421090831952,2.43903561720835,0.635030673459631,0,0,0.577703239502549,0.997407872150954,1.02084678131185,0,0,0,0,0,0,4.78407908307194,5.27160042341476,13.5824596599644,2.34717403304412,7.41285531693518,3.29529274101708,3.30530828426282,5.17949760013841,2.87505128729943,0,0,0,7.71778308107841,2.86533439938757,4.12537673821954,10.5204559646991,21.1596391708813,14.5781222806421,7.45457970552091,6.22506357277798,0.449949858640699,0,1.4209602298922,6.89080254192331,8.4528027170742,14.6202353354953,18.0907957364465,17.0363218694619,3.71346279724945,3.75476519617743,13.9639511105048,13.801747826626,14.7075005857603,0,0.383062014255563,1.53606533256243,7.25374582516066,5.76372154695181,8.33461392890816,1.67509799400829,2.25105044012672,1.37518422999129,1.76777151284201,3.27454865837937,5.21918448310842,2.65041676666144,4.1564358058732,1.44932244350839,0,0.679971333707751,0,0,0,0.561777680527007,1.70430322578058,2.07828803682295,1.41335829804136,5.35204995151386,5.13305909657271,0,7.11066703153331,1.73192832808971,2.02687892380079,3.0331466700887,0.68510327831436,0,1.48442139064825,2.4287945747259,1.82679286987285,1.61430848079241,1.65794904607885,1.88141931417128,1.13099932196708,0,0,0.884610551949874,2.75003644910596,1.76673214768315,0.969750506270444,1.86391761218122,0.585561594023094,0,1.02182822083437,1.67741174308288,0.599902730993408,0.889491589511453,0.898743836428936,1.37250180845588,2.89005009859588,0.521472960576829,0.767146371990992,0.62336413367868,0.648965052271031,2.95334155165917,3.4833951770826,14.6579199891531,0.841767423545896,3.25301107406759,8.27647575960503,5.94205028357652,4.06903008156431,3.12967896096108,5.76511741281824,4.12287588062807,0.776110112217047,9.91612767491074,6.05139456537022,5.27853372491847,3.5071317188412,2.78047249225598,2.089512999133,1.02891068203972,2.18937693500343,0,0.51469581422943,0.284163499395593,2.27838349789052,2.57978665979206,2.70093092191522,1.65721314909647,1.77087808572663,0.617068451549513,0.232533944750408,1.3413670069981,0.583826711835847,0.822799249567402,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.134206418760372,0.420579897128254,3.91037527041281,0,0.793351699990633,4.69234151177515,2.78684006232526,2.31961430379768,2.42020229548011,1.33426826306922,1.14135375667535,0.474529061544512,1.81168850196412,0.502670417600539,1.39269530428806,1.36474860983384,0,0.648414149624083,1.7922714592893,2.65535061334314,2.85621281524322,3.38123207019241,1.22190796707189,1.55161989734101,0.631222379012867,0.126473074248515,0,0,0,0,0.500535317148282,0.786235980452812,0.899448449539415,0.405720242777006,0,0.763877555344259,0,0.648540907100142,0,0,0.744281895337007,0.312037673114561,0,0,0,0.184753190166605,3.60033682363921,2.93336957595647,2.71592137240301,2.81628297946203,0.670025029767263,0.476087281772027,0.975668239288994,2.99506773801763,3.32197034473162,2.07291199254733,0,0.172684981865896,0,0,0.54390568381871,1.47529281905711,2.48343071674259,1.28440471990234,1.75817529888305,2.95082901678016,1.26235463602186,14.5133780931478,16.3984272604588,18.9572590004863,12.4263774935327,11.3627323782021,9.34152551603147,12.5491317519217,12.5670018901864,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13445 | |||
|HGNC= | |||
|MCL_coexpression_id=1241 | |||
|TSSclassifier=NA | |||
|UniProt=F2Z4B3 | |||
|association_with_transcript=-24bp_to_ENSMUST00000111472_5end | |||
|cluster_id=chr5:124802266..124802311,- | |||
|description=CAGE_peak_2_at_Cdk2ap1_5end | |||
|id=chr5:124802266..124802311,- | |||
|ontology_enrichment_celltype=CL:0000055!5.33e-18!50;CL:0000221!8.41e-17!44;CL:0000133!8.41e-17!44;CL:0002319!2.69e-16!43;CL:0000393!1.92e-15!39;CL:0000211!1.92e-15!39;CL:0000540!9.55e-13!33;CL:0000047!9.55e-13!33;CL:0000031!9.55e-13!33;CL:0000404!9.55e-13!33;CL:0002321!2.78e-12!70;CL:0000220!2.78e-12!70;CL:0000107!4.34e-07!9;CL:0000117!4.81e-07!23;CL:0000337!4.81e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.17e-18,44;CL:0000133,4.17e-18,44;CL:0002319,1.46e-17,43;CL:0000393,1.19e-16,39;CL:0000211,1.19e-16,39;CL:0002321,4.85e-14,70;CL:0000540,9.41e-14,33;CL:0000047,9.41e-14,33;CL:0000031,9.41e-14,33;CL:0000404,9.41e-14,33;CL:0000117,1.31e-07,23;CL:0000337,1.31e-07,23;CL:0000107,1.73e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.00e-12!102;UBERON:0000924!2.00e-12!102;UBERON:0006601!2.00e-12!102;UBERON:0000073!6.78e-11!75;UBERON:0001016!6.78e-11!75;UBERON:0001017!2.34e-10!73;UBERON:0005743!2.34e-10!73;UBERON:0002346!1.21e-07!71;UBERON:0003075!1.21e-07!71;UBERON:0007284!1.21e-07!71;UBERON:0000010!1.99e-07!11;UBERON:0002410!4.34e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.36e-11,95;UBERON:0000924,4.36e-11,95;UBERON:0006601,4.36e-11,95;UBERON:0001016,2.32e-10,75;UBERON:0001017,8.31e-10,73;UBERON:0000010,7.50e-08,11;UBERON:0002410,1.73e-07,9 | |||
|phase1_expression=5.12476310735341,0,0,0,0,3.02182689441402,2.33612640595526,0,0.281577444303333,0.936258105287974,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.255129870453209,2.87943758482567,4.96279599363977,0.639969691173627,0.45881856213434,0.57423196411502,0,2.37018355954478,0.950117097281869,1.76421090831952,2.43903561720835,0.635030673459631,0,0,0.577703239502549,0.997407872150954,1.02084678131185,0,0,0,0,0,0,4.78407908307194,5.27160042341476,13.5824596599644,2.34717403304412,7.41285531693518,3.29529274101708,3.30530828426282,5.17949760013841,2.87505128729943,0,0,0,7.71778308107841,2.86533439938757,4.12537673821954,10.5204559646991,21.1596391708813,14.5781222806421,7.45457970552091,6.22506357277798,0.449949858640699,0,1.4209602298922,6.89080254192331,8.4528027170742,14.6202353354953,18.0907957364465,17.0363218694619,3.71346279724945,3.75476519617743,13.9639511105048,13.801747826626,14.7075005857603,0,0.383062014255563,1.53606533256243,7.25374582516066,5.76372154695181,8.33461392890816,1.67509799400829,2.25105044012672,1.37518422999129,1.76777151284201,3.27454865837937,5.21918448310842,2.65041676666144,4.1564358058732,1.44932244350839,0,0.679971333707751,0,0,0,0.561777680527007,1.70430322578058,2.07828803682295,1.41335829804136,5.35204995151386,5.13305909657271,0,7.11066703153331,1.73192832808971,2.02687892380079,3.0331466700887,0.68510327831436,0,1.48442139064825,2.4287945747259,1.82679286987285,1.61430848079241,1.65794904607885,1.88141931417128,1.13099932196708,0,0,0.884610551949874,2.75003644910596,1.76673214768315,0.969750506270444,1.86391761218122,0.585561594023094,0,1.02182822083437,1.67741174308288,0.599902730993408,0.889491589511453,0.898743836428936,1.37250180845588,2.89005009859588,0.521472960576829,0.767146371990992,0.62336413367868,0.648965052271031,2.95334155165917,3.4833951770826,14.6579199891531,0.841767423545896,3.25301107406759,8.27647575960503,5.94205028357652,4.06903008156431,3.12967896096108,5.76511741281824,4.12287588062807,0.776110112217047,9.91612767491074,6.05139456537022,5.27853372491847,3.5071317188412,2.78047249225598,2.089512999133,1.02891068203972,2.18937693500343,0,0.51469581422943,0.284163499395593,2.27838349789052,2.57978665979206,2.70093092191522,1.65721314909647,1.77087808572663,0.617068451549513,0.232533944750408,1.3413670069981,0.583826711835847,0.822799249567402,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.134206418760372,0.420579897128254,3.91037527041281,0,0.793351699990633,4.69234151177515,2.78684006232526,2.31961430379768,2.42020229548011,1.33426826306922,1.14135375667535,0.474529061544512,1.81168850196412,0.502670417600539,1.39269530428806,1.36474860983384,0,0.648414149624083,1.7922714592893,2.65535061334314,2.85621281524322,3.38123207019241,1.22190796707189,1.55161989734101,0.631222379012867,0.126473074248515,0,0,0,0,0.500535317148282,0.786235980452812,0.899448449539415,0.405720242777006,0,0.763877555344259,0,0.648540907100142,0,0,0.744281895337007,0.312037673114561,0,0,0,0.184753190166605,3.60033682363921,2.93336957595647,2.71592137240301,2.81628297946203,0.670025029767263,0.476087281772027,0.975668239288994,2.99506773801763,3.32197034473162,2.07291199254733,0,0.172684981865896,0,0,0.54390568381871,1.47529281905711,2.48343071674259,1.28440471990234,1.75817529888305,2.95082901678016,1.26235463602186,14.5133780931478,16.3984272604588,18.9572590004863,12.4263774935327,11.3627323782021,9.34152551603147,12.5491317519217,12.5670018901864,10.2774822266096,0.642642632843614,1.98716119291576,2.31485284767432,2.76907830901079,1.15479086080775,0,4.61283208694465,2.41858845571801,1.88605079755898,1.47650946440386,2.45948118355142,3.35956781118687,6.90714086007261,4.63446591900138,0.316036757935816,0,0,4.76615448055303,3.06103859853227,6.33857550535497,4.07240366560025,5.32020700926821,3.74574516964348,2.96188237083818,3.95804433848979,0.938686832254841,0,3.96951116498931,0.65954501176592,1.93757312035087,1.14594557363496,1.19372344003136,0.820704498725306,1.1659233465194,2.78137953015765,0,1.44470807574256,0.740778109478847,0.376736914009382,0,0,1.69978429993855,1.81936888020755,1.65839968565309,0,5.21954389408873,1.82987520414164,1.40406943068342,0.627264888043406,0.655087691238533,1.48350781023303,1.1571483801547,0.523511883968059,0.777689839750757,4.97071450469541,0,1.79419855252775,1.65458490457098,1.36115831840833,0.904118764344118,2.36538575687089,2.58185925020659,1.3020438484395,1.04859344425711,0.483168241652012,0.576060012515731,0.316011120628178,1.62180172232131,1.23253148597793,1.55904987573354,1.43221356533985,0.993406773906324,1.08175904567972,1.03382669022204,0.706765149637033,0.685861259894999,0.604957110821043,0.487289403698762,0.192423683280659,0.350630706544707,0.906921534460845,0,0.179427713218951,0.167884616364078,0.19318959403219,0.375364950902364,0.549454872801795,0,0,0,0.920650473014354,1.14579102687879,0.859265911718438,0.685082519770642,1.5107877947794,0.675022500231806,0.45032120322422,0.453142408984205,0,8.61434984948666,3.990248734010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| |||
|short_description=p2@Cdk2ap1 | |||
}} |
Latest revision as of 21:37, 1 October 2015
Short description: | p2@Cdk2ap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cdk2ap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1241 |
Association with transcript: | -24bp_to_ENSMUST00000111472_5end |
EntrezGene: | Cdk2ap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.17e-18 | 44 |
neurectodermal cell | 4.17e-18 | 44 |
neural cell | 1.46e-17 | 43 |
electrically responsive cell | 1.19e-16 | 39 |
electrically active cell | 1.19e-16 | 39 |
embryonic cell | 4.85e-14 | 70 |
neuron | 9.41e-14 | 33 |
neuronal stem cell | 9.41e-14 | 33 |
neuroblast | 9.41e-14 | 33 |
electrically signaling cell | 9.41e-14 | 33 |
CNS neuron (sensu Vertebrata) | 1.31e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.31e-07 | 23 |
autonomic neuron | 1.73e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.36e-11 | 95 |
ectoderm | 4.36e-11 | 95 |
presumptive ectoderm | 4.36e-11 | 95 |
nervous system | 2.32e-10 | 75 |
central nervous system | 8.31e-10 | 73 |
peripheral nervous system | 7.50e-08 | 11 |
autonomic nervous system | 1.73e-07 | 9 |