FFCP PHASE1:Mm9::chr5:124901185..124901203,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=67956|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=5bp_to_ENSMUST00000125588_5end|description=CAGE_peak_4_at_Setd8_5end|id=chr5:124901185..124901203,+|ontology_enrichment_celltype=CL:0002563!6.25e-08!9;CL:0002251!6.25e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,9.87e-11,9;CL:0002251,9.87e-11,9;CL:0000239,2.01e-10,6;CL:0000677,2.01e-10,6;CL:0000584,2.01e-10,6;CL:0000075,8.68e-09,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.48e-22!43;UBERON:0005409!1.69e-20!59;UBERON:0000344!2.21e-13!15;UBERON:0001242!1.75e-11!13;UBERON:0000060!1.75e-11!13;UBERON:0001262!1.75e-11!13;UBERON:0004786!1.75e-11!13;UBERON:0004119!1.47e-10!130;UBERON:0000925!1.47e-10!130;UBERON:0006595!1.47e-10!130;UBERON:0001007!8.10e-10!128;UBERON:0001555!8.10e-10!128;UBERON:0007026!8.10e-10!128;UBERON:0004923!1.82e-09!24;UBERON:0004921!9.51e-09!126;UBERON:0004185!9.51e-09!126;UBERON:0003350!6.25e-08!9;UBERON:0004808!6.25e-08!9;UBERON:0001277!6.25e-08!9;UBERON:0002108!5.20e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.21e-33,31;UBERON:0005409,1.61e-25,47;UBERON:0000344,5.19e-20,15;UBERON:0001242,9.11e-17,13;UBERON:0001262,9.11e-17,13;UBERON:0004786,9.11e-17,13;UBERON:0004923,9.07e-13,24;UBERON:0003350,9.87e-11,9;UBERON:0004808,9.87e-11,9;UBERON:0001277,9.87e-11,9;UBERON:0000485,1.75e-08,11;UBERON:0001007,2.66e-08,116;UBERON:0001555,2.66e-08,116;UBERON:0007026,2.66e-08,116;UBERON:0004119,5.16e-08,118;UBERON:0000925,5.16e-08,118;UBERON:0006595,5.16e-08,118;UBERON:0002108,1.74e-07,4;UBERON:0004921,5.42e-07,114|phase1_expression=0,18.4956966048861,18.1999695755814,15.1232105653415,16.0286633582831,3.3575854382378,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,19.679068003589,15.3704218315004,10.3361753540704,12.0613358924541,12.4973314957816,17.29213117053,13.3575968772763,4.6563407237614,0,0,0,0.288851619751275,1.66234645358492,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.151143120213571,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,5.709193985953,0,0,0,0,0,0,0,0,3.46072954828123,0.144599356919912,0,0,0,0,0,0,0,18.6483650302272,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,50.2236550135373,16.1314845664762,0,0,0,3.22693639397348,8.2279876222602,13.1255682017666,13.2868137232463,14.987604879885,19.8554814952213,16.7123436514567,17.3518037536017,12.5834717211591,13.8328351919804,17.922714592893,0,0,0,0,0,0,0.189709611372772,2.50937251565324,3.29697328466887,2.83813477020141,0.296452627087149,0,0,0,0.202860121388503,0.482354319504834,1.2731292589071,0.863088412352432,0.648540907100142,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.714130922658041,0.780534591431195,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,2.65490276679926,0,0.302323556964751,0.565815239267694,0.295301892880773,0.922305443831782,3.6179961043551,0,0,2.21225730555071,4.21674434299995,2.06271086496374,0,0,0,0,0,0,0,0,0.704015124191131,0.847328283455281,4.19003956304428,0.16488625294148,0,0,0,0,15.7399651780119,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0.209088296014469,1.09181281873089,1.34864346384821,1.65306911450672,0.523511883968059,1.29614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,9.02829787263654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,1.11123363900808,0.412070114477788,1.28367683836726,0.252697211763798,1.2673964994512,1.50901073108861,0.561849044819294,0.704276676453562,0.574354689556133,0,1.0429589335037,1.15745532278223,0.412085900803307,0.588795680537589,0.685738504770831,0.887379030796687,1.66905332963125,0.581385666529314,0.846984423737976,0.592302255241736,1.09756783723664,1.05227884575137,0.543216455383447,0,0.830445126869219,1.28055827088233,0.818462086339379,0.619747364743864,0.192906610981141,0,0.935726433781634,0.644613162144895,0,0,0|short_description=p4@Setd8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67956 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=5bp_to_ENSMUST00000125588_5end | |||
|cluster_id=chr5:124901185..124901203,+ | |||
|description=CAGE_peak_4_at_Setd8_5end | |||
|id=chr5:124901185..124901203,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.25e-08!9;CL:0002251!6.25e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.87e-11,9;CL:0002251,9.87e-11,9;CL:0000239,2.01e-10,6;CL:0000677,2.01e-10,6;CL:0000584,2.01e-10,6;CL:0000075,8.68e-09,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.48e-22!43;UBERON:0005409!1.69e-20!59;UBERON:0000344!2.21e-13!15;UBERON:0001242!1.75e-11!13;UBERON:0000060!1.75e-11!13;UBERON:0001262!1.75e-11!13;UBERON:0004786!1.75e-11!13;UBERON:0004119!1.47e-10!130;UBERON:0000925!1.47e-10!130;UBERON:0006595!1.47e-10!130;UBERON:0001007!8.10e-10!128;UBERON:0001555!8.10e-10!128;UBERON:0007026!8.10e-10!128;UBERON:0004923!1.82e-09!24;UBERON:0004921!9.51e-09!126;UBERON:0004185!9.51e-09!126;UBERON:0003350!6.25e-08!9;UBERON:0004808!6.25e-08!9;UBERON:0001277!6.25e-08!9;UBERON:0002108!5.20e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.21e-33,31;UBERON:0005409,1.61e-25,47;UBERON:0000344,5.19e-20,15;UBERON:0001242,9.11e-17,13;UBERON:0001262,9.11e-17,13;UBERON:0004786,9.11e-17,13;UBERON:0004923,9.07e-13,24;UBERON:0003350,9.87e-11,9;UBERON:0004808,9.87e-11,9;UBERON:0001277,9.87e-11,9;UBERON:0000485,1.75e-08,11;UBERON:0001007,2.66e-08,116;UBERON:0001555,2.66e-08,116;UBERON:0007026,2.66e-08,116;UBERON:0004119,5.16e-08,118;UBERON:0000925,5.16e-08,118;UBERON:0006595,5.16e-08,118;UBERON:0002108,1.74e-07,4;UBERON:0004921,5.42e-07,114 | |||
|phase1_expression=0,18.4956966048861,18.1999695755814,15.1232105653415,16.0286633582831,3.3575854382378,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,19.679068003589,15.3704218315004,10.3361753540704,12.0613358924541,12.4973314957816,17.29213117053,13.3575968772763,4.6563407237614,0,0,0,0.288851619751275,1.66234645358492,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.151143120213571,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,5.709193985953,0,0,0,0,0,0,0,0,3.46072954828123,0.144599356919912,0,0,0,0,0,0,0,18.6483650302272,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,50.2236550135373,16.1314845664762,0,0,0,3.22693639397348,8.2279876222602,13.1255682017666,13.2868137232463,14.987604879885,19.8554814952213,16.7123436514567,17.3518037536017,12.5834717211591,13.8328351919804,17.922714592893,0,0,0,0,0,0,0.189709611372772,2.50937251565324,3.29697328466887,2.83813477020141,0.296452627087149,0,0,0,0.202860121388503,0.482354319504834,1.2731292589071,0.863088412352432,0.648540907100142,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.714130922658041,0.780534591431195,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.164970122972535,2.65490276679926,0,0.302323556964751,0.565815239267694,0.295301892880773,0.922305443831782,3.6179961043551,0,0,2.21225730555071,4.21674434299995,2.06271086496374,0,0,0,0,0,0,0,0,0.704015124191131,0.847328283455281,4.19003956304428,0.16488625294148,0,0,0,0,15.7399651780119,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0.209088296014469,1.09181281873089,1.34864346384821,1.65306911450672,0.523511883968059,1.29614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,9.02829787263654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,1.11123363900808,0.412070114477788,1.28367683836726,0.252697211763798,1.2673964994512,1.50901073108861,0.561849044819294,0.704276676453562,0.574354689556133,0,1.0429589335037,1.15745532278223,0.412085900803307,0.588795680537589,0.685738504770831,0.887379030796687,1.66905332963125,0.581385666529314,0.846984423737976,0.592302255241736,1.09756783723664,1.05227884575137,0.543216455383447,0,0.830445126869219,1.28055827088233,0.818462086339379,0.619747364743864,0.192906610981141,0,0.935726433781634,0.644613162144895,0,0,0 | |||
|short_description=p4@Setd8 | |||
}} |
Latest revision as of 21:46, 1 October 2015
Short description: | p4@Setd8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Setd8_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 5bp_to_ENSMUST00000125588_5end |
EntrezGene: | Setd8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.87e-11 | 9 |
epithelial cell of alimentary canal | 9.87e-11 | 9 |
brush border epithelial cell | 2.01e-10 | 6 |
gut absorptive cell | 2.01e-10 | 6 |
enterocyte | 2.01e-10 | 6 |
columnar/cuboidal epithelial cell | 8.68e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.21e-33 | 31 |
gastrointestinal system | 1.61e-25 | 47 |
mucosa | 5.19e-20 | 15 |
intestinal mucosa | 9.11e-17 | 13 |
wall of intestine | 9.11e-17 | 13 |
gastrointestinal system mucosa | 9.11e-17 | 13 |
organ component layer | 9.07e-13 | 24 |
epithelium of mucosa | 9.87e-11 | 9 |
gastrointestinal system epithelium | 9.87e-11 | 9 |
intestinal epithelium | 9.87e-11 | 9 |
simple columnar epithelium | 1.75e-08 | 11 |
digestive system | 2.66e-08 | 116 |
digestive tract | 2.66e-08 | 116 |
primitive gut | 2.66e-08 | 116 |
endoderm-derived structure | 5.16e-08 | 118 |
endoderm | 5.16e-08 | 118 |
presumptive endoderm | 5.16e-08 | 118 |
small intestine | 1.74e-07 | 4 |
subdivision of digestive tract | 5.42e-07 | 114 |