FFCP PHASE1:Mm9::chr13:74258883..74258894,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:74258883..74258894,+
|short_description=p2@Slc9a3
|description=CAGE_peak_2_at_Slc9a3_5end
|association_with_transcript=-68bp_to_ENSMUST00000036208,NM_0010...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=105243 | |EntrezGene=105243 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=G3X939 | |UniProt=G3X939 | ||
|association_with_transcript=-68bp_to_ENSMUST00000036208,NM_001081060,uc007res.1_5end | |||
|cluster_id=chr13:74258883..74258894,+ | |||
|description=CAGE_peak_2_at_Slc9a3_5end | |||
|id=chr13:74258883..74258894,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.87e-08!9;CL:0002251!2.87e-08!9;CL:0000075!1.01e-07!7;CL:0000239!3.15e-07!6;CL:0000677!3.15e-07!6;CL:0000212!3.15e-07!6;CL:0000584!3.15e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.25e-12,6;CL:0000677,3.25e-12,6;CL:0000584,3.25e-12,6;CL:0000075,2.47e-10,7;CL:0002563,3.98e-10,9;CL:0002251,3.98e-10,9;CL:0000682,6.08e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.83e-15!43;UBERON:0005409!1.48e-14!59;UBERON:0000344!1.70e-13!15;UBERON:0001242!8.51e-12!13;UBERON:0000060!8.51e-12!13;UBERON:0001262!8.51e-12!13;UBERON:0004786!8.51e-12!13;UBERON:0004923!1.90e-08!24;UBERON:0003350!2.87e-08!9;UBERON:0004808!2.87e-08!9;UBERON:0001277!2.87e-08!9;UBERON:0000485!1.03e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.56e-38,31;UBERON:0005409,2.34e-26,47;UBERON:0000344,1.23e-19,15;UBERON:0001242,1.66e-16,13;UBERON:0001262,1.66e-16,13;UBERON:0004786,1.66e-16,13;UBERON:0004923,8.54e-13,24;UBERON:0003350,3.98e-10,9;UBERON:0004808,3.98e-10,9;UBERON:0001277,3.98e-10,9;UBERON:0001007,1.32e-08,116;UBERON:0001555,1.32e-08,116;UBERON:0007026,1.32e-08,116;UBERON:0004119,2.48e-08,118;UBERON:0000925,2.48e-08,118;UBERON:0006595,2.48e-08,118;UBERON:0000485,4.65e-08,11;UBERON:0002108,5.32e-08,4;UBERON:0004921,2.70e-07,114 | |||
|phase1_expression=0,63.5135241903637,64.1548927539246,143.065571948131,127.728411136319,4.70061961353291,5.84031601488814,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.78590909317247,0,0.261199789138935,9.5995453676044,10.3234176480227,30.4342940980961,26.7072437618626,12.2818602630957,8.55105387553682,20.9185007700743,4.8780712344167,0,0,0,0.288851619751275,1.49611180822643,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0.704217098883403,0,0,0,0,0,0,8.33542321949138,0,0,0,0,0.230615497256059,0,0.117588707135705,0,3.46072954828123,0,0,0.161766849947409,0,0,5.59175283654366,0.585561594023094,2.09446706813455,23.2465920239818,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.243206428637567,0.146199987425332,0,0,0,0,109.038198384653,42.3120906661671,0,0,0.515469845288373,2.21851877085677,5.55945109612176,10.4624094361908,22.7773949541366,15.481701744057,18.3474702424197,16.9113001234978,14.2323783596958,26.0657628509724,28.5302225834596,28.2780608021201,0,0.228497025219458,1.1270773567308,0.814605311381257,1.74557238450863,3.71719845418688,5.6280518040589,8.56138858281692,10.3619160375307,11.3525390808056,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9101375701962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.661585194164886,0.16488625294148,0,0,0,0,26.2332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.648032044930808,0.418176592028937,1.31017538247707,0.134864346384821,0.165306911450672,0.26175594198403,7.2584385043404,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0,0,0,0,0,0,0.643105137237198,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0.320919209591815,1.26348605881899,0.50695859978048,0.188626341386076,0.749132059759059,0.640251524048693,0.287177344778066,0.476293691283074,0.463537303779422,0.578727661391115,0,0,1.02860775715625,0.887379030796687,0.715308569841963,0.436039249896986,0.470546902076653,0.423073039458382,0.548783918618318,0,0.814824683075171,0.561142271657738,0.711810108745045,0.197008964751127,1.22769312950907,0.619747364743864,0.192906610981141,0.249810577937946,0.701794825336225,0.859484216193193,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,63.5135241903637,64.1548927539246,143.065571948131,127.728411136319,4.70061961353291,5.84031601488814,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.78590909317247,0,0.261199789138935,9.5995453676044,10.3234176480227,30.4342940980961,26.7072437618626,12.2818602630957,8.55105387553682,20.9185007700743,4.8780712344167,0,0,0,0.288851619751275,1.49611180822643,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0.704217098883403,0,0,0,0,0,0,8.33542321949138,0,0,0,0,0.230615497256059,0,0.117588707135705,0,3.46072954828123,0,0,0.161766849947409,0,0,5.59175283654366,0.585561594023094,2.09446706813455,23.2465920239818,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.243206428637567,0.146199987425332,0,0,0,0,109.038198384653,42.3120906661671,0,0,0.515469845288373,2.21851877085677,5.55945109612176,10.4624094361908,22.7773949541366,15.481701744057,18.3474702424197,16.9113001234978,14.2323783596958,26.0657628509724,28.5302225834596,28.2780608021201,0,0.228497025219458,1.1270773567308,0.814605311381257,1.74557238450863,3.71719845418688,5.6280518040589,8.56138858281692,10.3619160375307,11.3525390808056,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9101375701962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.661585194164886,0.16488625294148,0,0,0,0,26.2332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.648032044930808,0.418176592028937,1.31017538247707,0.134864346384821,0.165306911450672,0.26175594198403,7.2584385043404,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0,0,0,0,0,0,0.643105137237198,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0.320919209591815,1.26348605881899,0.50695859978048,0.188626341386076,0.749132059759059,0.640251524048693,0.287177344778066,0.476293691283074,0.463537303779422,0.578727661391115,0,0,1.02860775715625,0.887379030796687,0.715308569841963,0.436039249896986,0.470546902076653,0.423073039458382,0.548783918618318,0,0.814824683075171,0.561142271657738,0.711810108745045,0.197008964751127,1.22769312950907,0.619747364743864,0.192906610981141,0.249810577937946,0.701794825336225,0.859484216193193,0.191288332068843,0,0.231867835620421 | ||
|short_description=p2@Slc9a3 | |||
}} | }} |
Latest revision as of 22:24, 1 October 2015
Short description: | p2@Slc9a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc9a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -68bp_to_ENSMUST00000036208, NM_001081060, uc007res.1_5end |
EntrezGene: | Slc9a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.25e-12 | 6 |
gut absorptive cell | 3.25e-12 | 6 |
enterocyte | 3.25e-12 | 6 |
columnar/cuboidal epithelial cell | 2.47e-10 | 7 |
intestinal epithelial cell | 3.98e-10 | 9 |
epithelial cell of alimentary canal | 3.98e-10 | 9 |
M cell of gut | 6.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.56e-38 | 31 |
gastrointestinal system | 2.34e-26 | 47 |
mucosa | 1.23e-19 | 15 |
intestinal mucosa | 1.66e-16 | 13 |
wall of intestine | 1.66e-16 | 13 |
gastrointestinal system mucosa | 1.66e-16 | 13 |
organ component layer | 8.54e-13 | 24 |
epithelium of mucosa | 3.98e-10 | 9 |
gastrointestinal system epithelium | 3.98e-10 | 9 |
intestinal epithelium | 3.98e-10 | 9 |
digestive system | 1.32e-08 | 116 |
digestive tract | 1.32e-08 | 116 |
primitive gut | 1.32e-08 | 116 |
endoderm-derived structure | 2.48e-08 | 118 |
endoderm | 2.48e-08 | 118 |
presumptive endoderm | 2.48e-08 | 118 |
simple columnar epithelium | 4.65e-08 | 11 |
small intestine | 5.32e-08 | 4 |
subdivision of digestive tract | 2.70e-07 | 114 |