FFCP PHASE1:Mm9::chr11:69468501..69468515,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:69468501..69468515,+
|short_description=p2@Sox15
|description=CAGE_peak_2_at_Sox15_5end
|association_with_transcript=-23bp_to_NM_009235_5end
|EntrezGene=...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20670 | |EntrezGene=20670 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1579 | |||
|TSSclassifier=NA | |||
|UniProt=P43267,Q5F2B2 | |UniProt=P43267,Q5F2B2 | ||
|association_with_transcript=-23bp_to_NM_009235_5end | |||
|cluster_id=chr11:69468501..69468515,+ | |||
|description=CAGE_peak_2_at_Sox15_5end | |||
|id=chr11:69468501..69468515,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.76e-17,3;CL:0000351,2.76e-17,3;CL:0000068,6.89e-08,3;CL:0002202,6.89e-08,3;CL:0000069,6.89e-08,3;CL:0002632,6.89e-08,3;CL:0002368,6.89e-08,3;CL:0000307,6.89e-08,3;CL:0000377,6.89e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!6.36e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,2.76e-17,3;UBERON:0000307,2.76e-17,3;UBERON:0007010,2.76e-17,3;UBERON:0001987,2.70e-11,2;UBERON:0003124,2.70e-11,2;UBERON:0004340,2.70e-11,2;UBERON:0000161,1.71e-10,5;UBERON:0003975,5.02e-10,5;UBERON:0000162,2.85e-08,3;UBERON:0001353,2.85e-08,3;UBERON:0000163,2.85e-08,3;UBERON:0006866,2.85e-08,3;UBERON:0001046,2.85e-08,3;UBERON:0000164,2.85e-08,3;UBERON:0000931,2.85e-08,3;UBERON:0003126,6.89e-08,3;UBERON:0001005,6.89e-08,3;UBERON:0007196,6.89e-08,3;UBERON:0001558,6.89e-08,3;UBERON:0005631,8.07e-08,3;UBERON:0000478,8.07e-08,3;UBERON:0000158,8.07e-08,3;UBERON:0001255,6.50e-07,1;UBERON:0001556,6.50e-07,1;UBERON:0001723,8.36e-07,1;UBERON:0001033,8.36e-07,1;UBERON:0010056,8.36e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,1.29894624606728,1.77351905832569,0.505524445014783,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0.373220911830279,0.252722758433675,1.26265113531884,0,0,0,0,0.204109497453984,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0.219195732427575,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,1.09060118843252,1.06949213515416,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,1.40803024838226,1.27099242518292,0,1.15420377059036,0.645857706783622,0.904693873922338,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0.276399947608848,1.90934123603023,0,0.813277868507395,0.324016022465404,0.836353184057875,0.87345025498471,0.404593039154462,0.661227645802687,0.785267825952089,0,0,0,1.04661582230785,1.32366792365678,0.583353565032143,0.387479470433193,0,0.469428954583016,0.651021924219751,0,0.241584120826006,0,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,3.85441652145859,2.88581739386284,7.89481938163386,5.87596157274275,6.18206700903009,0,0,2.78678892802786,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.128050304809739,0,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,1.29894624606728,1.77351905832569,0.505524445014783,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0.373220911830279,0.252722758433675,1.26265113531884,0,0,0,0,0.204109497453984,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0.219195732427575,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,1.09060118843252,1.06949213515416,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,1.40803024838226,1.27099242518292,0,1.15420377059036,0.645857706783622,0.904693873922338,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0.276399947608848,1.90934123603023,0,0.813277868507395,0.324016022465404,0.836353184057875,0.87345025498471,0.404593039154462,0.661227645802687,0.785267825952089,0,0,0,1.04661582230785,1.32366792365678,0.583353565032143,0.387479470433193,0,0.469428954583016,0.651021924219751,0,0.241584120826006,0,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,3.85441652145859,2.88581739386284,7.89481938163386,5.87596157274275,6.18206700903009,0,0,2.78678892802786,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.128050304809739,0,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p2@Sox15 | |||
}} | }} |
Latest revision as of 00:29, 2 October 2015
Short description: | p2@Sox15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sox15_5end |
Coexpression cluster: | MCL_coexpression_mm9:1579 |
Association with transcript: | -23bp_to_NM_009235_5end |
EntrezGene: | Sox15 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.76e-17 | 3 |
trophoblast cell | 2.76e-17 | 3 |
duct epithelial cell | 6.89e-08 | 3 |
epithelial cell of tracheobronchial tree | 6.89e-08 | 3 |
branched duct epithelial cell | 6.89e-08 | 3 |
epithelial cell of lower respiratory tract | 6.89e-08 | 3 |
respiratory epithelial cell | 6.89e-08 | 3 |
tracheal epithelial cell | 6.89e-08 | 3 |
tracheoblast | 6.89e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 2.76e-17 | 3 |
blastula | 2.76e-17 | 3 |
cleaving embryo | 2.76e-17 | 3 |
placenta | 2.70e-11 | 2 |
chorion | 2.70e-11 | 2 |
allantois | 2.70e-11 | 2 |
orifice | 1.71e-10 | 5 |
internal female genitalia | 5.02e-10 | 5 |
cloaca | 2.85e-08 | 3 |
anal region | 2.85e-08 | 3 |
embryonic cloaca | 2.85e-08 | 3 |
terminal part of digestive tract | 2.85e-08 | 3 |
hindgut | 2.85e-08 | 3 |
primitive urogenital sinus | 2.85e-08 | 3 |
proctodeum | 2.85e-08 | 3 |
trachea | 6.89e-08 | 3 |
respiratory airway | 6.89e-08 | 3 |
tracheobronchial tree | 6.89e-08 | 3 |
lower respiratory tract | 6.89e-08 | 3 |
extraembryonic membrane | 8.07e-08 | 3 |
extraembryonic structure | 8.07e-08 | 3 |
membranous layer | 8.07e-08 | 3 |
urinary bladder | 6.50e-07 | 1 |
lower urinary tract | 6.50e-07 | 1 |
tongue | 8.36e-07 | 1 |
gustatory system | 8.36e-07 | 1 |
future tongue | 8.36e-07 | 1 |