FFCP PHASE1:Mm9::chr7:86984339..86984384,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:86984339..86984384,- | |||
|description=CAGE_peak_at_chr7:86984339..86984384,- | |description=CAGE_peak_at_chr7:86984339..86984384,- | ||
|id=chr7:86984339..86984384,- | |id=chr7:86984339..86984384,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.04e-12,6;CL:0000677,2.04e-12,6;CL:0000584,2.04e-12,6;CL:0000075,1.58e-10,7;CL:0002563,5.20e-08,9;CL:0002251,5.20e-08,9;CL:0000473,7.13e-08,7;CL:0000682,1.20e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.59e-18!43;UBERON:0005409!2.05e-14!59;UBERON:0000344!2.70e-09!15;UBERON:0001242!9.96e-08!13;UBERON:0000060!9.96e-08!13;UBERON:0001262!9.96e-08!13;UBERON:0004786!9.96e-08!13;UBERON:0004119!1.87e-07!130;UBERON:0000925!1.87e-07!130;UBERON:0006595!1.87e-07!130;UBERON:0001007!2.34e-07!128;UBERON:0001555!2.34e-07!128;UBERON:0007026!2.34e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.42e-31,31;UBERON:0000344,7.34e-19,15;UBERON:0005409,1.27e-18,47;UBERON:0001242,3.05e-15,13;UBERON:0001262,3.05e-15,13;UBERON:0004786,3.05e-15,13;UBERON:0004923,1.06e-10,24;UBERON:0002108,9.86e-10,4;UBERON:0003350,5.20e-08,9;UBERON:0004808,5.20e-08,9;UBERON:0001277,5.20e-08,9;UBERON:0000331,8.06e-08,3;UBERON:0002116,8.06e-08,3;UBERON:0001204,8.06e-08,3;UBERON:0001168,8.06e-08,3;UBERON:0001007,1.11e-07,116;UBERON:0001555,1.11e-07,116;UBERON:0007026,1.11e-07,116;UBERON:0004119,1.94e-07,118;UBERON:0000925,1.94e-07,118;UBERON:0006595,1.94e-07,118 | |||
|phase1_expression=0,13.2610654902957,16.8349718574128,6.95667686005709,11.0197060588196,1.17515490338323,2.56973904655078,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,10.5594999043648,7.11168771308227,21.2465826722557,11.630573896295,10.1271479362368,37.2445902134493,38.0565495937495,9.97787297948871,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,1.77858959222228,0.899899717281399,4.94433181283487,4.2628806896766,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.0755715601067855,0,0,0.679971333707751,0.539703191637817,1.94932925234301,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0,0.209446706813455,17.6265368093928,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0.102904612379284,9.25172592354634,12.6936271998501,0,0,0.257734922644187,1.61346819698674,2.00140239460383,1.14135375667535,16.6085171540579,4.11747386810027,0.251335208800269,2.18852119245266,1.75467678407208,18.8752075817387,7.5648317456143,4.18196673834171,0.189667900953082,0.342745537829186,0,1.4255592949172,0.775809948670503,1.75339549725796,0.632365371242573,0.295220295959204,0.156998727841375,0.493588655687202,0.592905254174298,0,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0,0.549122826376163,10.0637744569148,0,0.624075346229121,0.505157755894224,0.358794827043824,1.4473305640901,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0.144649058581512,10.5553898757491,3.26343410291226,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.989820737835213,1.32745138339963,0,0.302323556964751,0.377210159511796,0.295301892880773,0,0.516856586336442,1.45413491791002,0.712994756769443,0,2.10837217149998,1.03135543248187,0,0,0,0,0,0.178368817602071,0,0,0,0.42366414172764,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0.328281799490123,10.2018292820448,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.41326727862668,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,2.38097111547445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.888986911206461,0.206035057238894,0.320919209591815,0,0,0,0,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0.294397840268795,0,0,0.476872379894642,0.145346416632329,0,0.169229215783353,0.365855945745545,0.263069711437843,0.543216455383447,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0,0.644613162144895,0.191288332068843,0.441182838239031,0 | |phase1_expression=0,13.2610654902957,16.8349718574128,6.95667686005709,11.0197060588196,1.17515490338323,2.56973904655078,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,10.5594999043648,7.11168771308227,21.2465826722557,11.630573896295,10.1271479362368,37.2445902134493,38.0565495937495,9.97787297948871,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,1.77858959222228,0.899899717281399,4.94433181283487,4.2628806896766,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.0755715601067855,0,0,0.679971333707751,0.539703191637817,1.94932925234301,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0,0.209446706813455,17.6265368093928,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0.102904612379284,9.25172592354634,12.6936271998501,0,0,0.257734922644187,1.61346819698674,2.00140239460383,1.14135375667535,16.6085171540579,4.11747386810027,0.251335208800269,2.18852119245266,1.75467678407208,18.8752075817387,7.5648317456143,4.18196673834171,0.189667900953082,0.342745537829186,0,1.4255592949172,0.775809948670503,1.75339549725796,0.632365371242573,0.295220295959204,0.156998727841375,0.493588655687202,0.592905254174298,0,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0,0.549122826376163,10.0637744569148,0,0.624075346229121,0.505157755894224,0.358794827043824,1.4473305640901,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0.144649058581512,10.5553898757491,3.26343410291226,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.989820737835213,1.32745138339963,0,0.302323556964751,0.377210159511796,0.295301892880773,0,0.516856586336442,1.45413491791002,0.712994756769443,0,2.10837217149998,1.03135543248187,0,0,0,0,0,0.178368817602071,0,0,0,0.42366414172764,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0.328281799490123,10.2018292820448,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.41326727862668,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,2.38097111547445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.888986911206461,0.206035057238894,0.320919209591815,0,0,0,0,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0.294397840268795,0,0,0.476872379894642,0.145346416632329,0,0.169229215783353,0.365855945745545,0.263069711437843,0.543216455383447,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0,0.644613162144895,0.191288332068843,0.441182838239031,0 | ||
|short_description=p@chr7:86984339..86984384,- | |short_description=p@chr7:86984339..86984384,- | ||
}} | }} |
Latest revision as of 15:14, 5 August 2015
Short description: | p@chr7:86984339..86984384, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:86984339..86984384, - |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.04e-12 | 6 |
gut absorptive cell | 2.04e-12 | 6 |
enterocyte | 2.04e-12 | 6 |
columnar/cuboidal epithelial cell | 1.58e-10 | 7 |
intestinal epithelial cell | 5.20e-08 | 9 |
epithelial cell of alimentary canal | 5.20e-08 | 9 |
defensive cell | 7.13e-08 | 7 |
M cell of gut | 1.20e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.42e-31 | 31 |
mucosa | 7.34e-19 | 15 |
gastrointestinal system | 1.27e-18 | 47 |
intestinal mucosa | 3.05e-15 | 13 |
wall of intestine | 3.05e-15 | 13 |
gastrointestinal system mucosa | 3.05e-15 | 13 |
organ component layer | 1.06e-10 | 24 |
small intestine | 9.86e-10 | 4 |
epithelium of mucosa | 5.20e-08 | 9 |
gastrointestinal system epithelium | 5.20e-08 | 9 |
intestinal epithelium | 5.20e-08 | 9 |
ileal mucosa | 8.06e-08 | 3 |
ileum | 8.06e-08 | 3 |
mucosa of small intestine | 8.06e-08 | 3 |
wall of small intestine | 8.06e-08 | 3 |
digestive system | 1.11e-07 | 116 |
digestive tract | 1.11e-07 | 116 |
primitive gut | 1.11e-07 | 116 |
endoderm-derived structure | 1.94e-07 | 118 |
endoderm | 1.94e-07 | 118 |
presumptive endoderm | 1.94e-07 | 118 |