FFCP PHASE1:Mm9::chr2:132771764..132771778,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=241639 | |EntrezGene=241639 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2285 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q7J9,P59113 | |UniProt=E9Q7J9,P59113 | ||
|association_with_transcript=0bp_to_ENSMUST00000165948,NM_198029,uc008mno.1,uc008mnp.1_5end | |association_with_transcript=0bp_to_ENSMUST00000165948,NM_198029,uc008mno.1,uc008mnp.1_5end | ||
|cluster_id=chr2:132771764..132771778,- | |||
|description=CAGE_peak_3_at_Fermt1_5end | |description=CAGE_peak_3_at_Fermt1_5end | ||
|id=chr2:132771764..132771778,- | |id=chr2:132771764..132771778,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.82e-10,9;CL:0002251,1.82e-10,9;CL:0002076,9.58e-10,15;CL:0000066,1.11e-09,25;CL:0000223,7.31e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.90e-27!59;UBERON:0000160!1.82e-25!43;UBERON:0001007!3.92e-11!128;UBERON:0001555!3.92e-11!128;UBERON:0007026!3.92e-11!128;UBERON:0000344!4.27e-11!15;UBERON:0004119!1.29e-10!130;UBERON:0000925!1.29e-10!130;UBERON:0006595!1.29e-10!130;UBERON:0004921!4.23e-10!126;UBERON:0004185!4.23e-10!126;UBERON:0001242!1.53e-09!13;UBERON:0000060!1.53e-09!13;UBERON:0001262!1.53e-09!13;UBERON:0004786!1.53e-09!13;UBERON:0002108!3.81e-08!16 | |ontology_enrichment_uberon=UBERON:0005409!3.90e-27!59;UBERON:0000160!1.82e-25!43;UBERON:0001007!3.92e-11!128;UBERON:0001555!3.92e-11!128;UBERON:0007026!3.92e-11!128;UBERON:0000344!4.27e-11!15;UBERON:0004119!1.29e-10!130;UBERON:0000925!1.29e-10!130;UBERON:0006595!1.29e-10!130;UBERON:0004921!4.23e-10!126;UBERON:0004185!4.23e-10!126;UBERON:0001242!1.53e-09!13;UBERON:0000060!1.53e-09!13;UBERON:0001262!1.53e-09!13;UBERON:0004786!1.53e-09!13;UBERON:0002108!3.81e-08!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.22e-37,47;UBERON:0000160,5.79e-34,31;UBERON:0000344,2.38e-18,15;UBERON:0001242,1.10e-15,13;UBERON:0001262,1.10e-15,13;UBERON:0004786,1.10e-15,13;UBERON:0001007,1.61e-13,116;UBERON:0001555,1.61e-13,116;UBERON:0007026,1.61e-13,116;UBERON:0004119,4.31e-13,118;UBERON:0000925,4.31e-13,118;UBERON:0006595,4.31e-13,118;UBERON:0004921,5.60e-12,114;UBERON:0003350,1.82e-10,9;UBERON:0004808,1.82e-10,9;UBERON:0001277,1.82e-10,9;UBERON:0004923,6.08e-10,24;UBERON:0000485,3.14e-08,11 | |||
|phase1_expression=0,2.79180326111489,3.18499467572675,1.81478526784098,0,10.2406355866253,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,5.91971964335605,5.50582274561208,2.8711598205751,4.73838195774982,7.97243560937789,6.27077284206034,4.53654233567875,4.6563407237614,0,0,0,12.7094712690561,9.47537478543406,11.2293145944303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,1.29894624606728,1.26679932737549,1.51657333504435,2.16949371466214,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,14.9113408974498,0,0,5.36459815938042,0,0,0,0,0,0,0.173824320192276,0,0,0,0.305518091550949,0,0.252722758433675,0.841767423545896,0,0,0,0,0.0680364991513279,0,0.281105173679186,0,0.215567992932842,0.189106080167819,0,0.219195732427575,0.834141747676794,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58214470653014,4.23120906661671,0,0.696710015581316,2.06187938115349,3.22693639397348,2.66853652613844,4.1849637744763,4.74529061544512,2.47048432086016,9.29940272560997,5.17286827306992,7.99352757188393,7.19055526923377,8.21324589523838,9.95706366271836,0.379335801906163,0.228497025219458,0,0.407302655690628,0.581857461502877,0.350679099451593,1.83385957660346,1.91893192373483,1.56998727841375,1.60416313098341,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0.35613120733451,0.325773918707152,5.1140738121486,0,0.242780636154981,0.302323556964751,1.32023555829129,1.47650946440386,1.53717573971964,2.32585463851399,2.18120237686503,2.49548164869305,0.316036757935816,2.10837217149998,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0.484393280087717,0.361877549568935,0.238744688006273,0.164140899745061,4.08073171281791,0,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,6.68269432610579,0.158167996790568,1.42323626988794,2.05210147561422,3.13632444021703,3.49380101993884,3.2367443132357,6.86023682520288,5.23511883968059,12.8318823558875,0,0,0,0,0,0.129159823477731,0,0,0.39061315453185,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0,0.15241361331,0,0.38983152295901,0.384847366561318,0.350630706544707,0.226730383615211,0,0,0,0.19318959403219,1.31377732815827,8.79127796482872,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,1.01391719956096,0.565879024158229,0.280924522409647,0.320125762024346,0.402048282689293,0,0.347652977834566,0.77163688185482,1.23625770240992,0,0,0.354951612318675,0.238436189947321,0,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0,0.591026894253381,0,0.77468420592983,0.578719832943424,0,0.233931608445408,0.429742108096597,0,0,0.231867835620421 | |phase1_expression=0,2.79180326111489,3.18499467572675,1.81478526784098,0,10.2406355866253,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,5.91971964335605,5.50582274561208,2.8711598205751,4.73838195774982,7.97243560937789,6.27077284206034,4.53654233567875,4.6563407237614,0,0,0,12.7094712690561,9.47537478543406,11.2293145944303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,1.29894624606728,1.26679932737549,1.51657333504435,2.16949371466214,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,14.9113408974498,0,0,5.36459815938042,0,0,0,0,0,0,0.173824320192276,0,0,0,0.305518091550949,0,0.252722758433675,0.841767423545896,0,0,0,0,0.0680364991513279,0,0.281105173679186,0,0.215567992932842,0.189106080167819,0,0.219195732427575,0.834141747676794,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58214470653014,4.23120906661671,0,0.696710015581316,2.06187938115349,3.22693639397348,2.66853652613844,4.1849637744763,4.74529061544512,2.47048432086016,9.29940272560997,5.17286827306992,7.99352757188393,7.19055526923377,8.21324589523838,9.95706366271836,0.379335801906163,0.228497025219458,0,0.407302655690628,0.581857461502877,0.350679099451593,1.83385957660346,1.91893192373483,1.56998727841375,1.60416313098341,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0.35613120733451,0.325773918707152,5.1140738121486,0,0.242780636154981,0.302323556964751,1.32023555829129,1.47650946440386,1.53717573971964,2.32585463851399,2.18120237686503,2.49548164869305,0.316036757935816,2.10837217149998,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0.484393280087717,0.361877549568935,0.238744688006273,0.164140899745061,4.08073171281791,0,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,6.68269432610579,0.158167996790568,1.42323626988794,2.05210147561422,3.13632444021703,3.49380101993884,3.2367443132357,6.86023682520288,5.23511883968059,12.8318823558875,0,0,0,0,0,0.129159823477731,0,0,0.39061315453185,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0,0.15241361331,0,0.38983152295901,0.384847366561318,0.350630706544707,0.226730383615211,0,0,0,0.19318959403219,1.31377732815827,8.79127796482872,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,1.01391719956096,0.565879024158229,0.280924522409647,0.320125762024346,0.402048282689293,0,0.347652977834566,0.77163688185482,1.23625770240992,0,0,0.354951612318675,0.238436189947321,0,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0,0.591026894253381,0,0.77468420592983,0.578719832943424,0,0.233931608445408,0.429742108096597,0,0,0.231867835620421 | ||
|short_description=p3@Fermt1 | |short_description=p3@Fermt1 | ||
}} | }} |
Latest revision as of 19:02, 25 September 2015
Short description: | p3@Fermt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fermt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2285 |
Association with transcript: | 0bp_to_ENSMUST00000165948, NM_198029, uc008mno.1, uc008mnp.1_5end |
EntrezGene: | Fermt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.82e-10 | 9 |
epithelial cell of alimentary canal | 1.82e-10 | 9 |
endo-epithelial cell | 9.58e-10 | 15 |
epithelial cell | 1.11e-09 | 25 |
endodermal cell | 7.31e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.22e-37 | 47 |
intestine | 5.79e-34 | 31 |
mucosa | 2.38e-18 | 15 |
intestinal mucosa | 1.10e-15 | 13 |
wall of intestine | 1.10e-15 | 13 |
gastrointestinal system mucosa | 1.10e-15 | 13 |
digestive system | 1.61e-13 | 116 |
digestive tract | 1.61e-13 | 116 |
primitive gut | 1.61e-13 | 116 |
endoderm-derived structure | 4.31e-13 | 118 |
endoderm | 4.31e-13 | 118 |
presumptive endoderm | 4.31e-13 | 118 |
subdivision of digestive tract | 5.60e-12 | 114 |
epithelium of mucosa | 1.82e-10 | 9 |
gastrointestinal system epithelium | 1.82e-10 | 9 |
intestinal epithelium | 1.82e-10 | 9 |
organ component layer | 6.08e-10 | 24 |
simple columnar epithelium | 3.14e-08 | 11 |