FFCP PHASE1:Mm9::chr3:127492141..127492165,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1278 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:127492141..127492165,+ | |||
|description=CAGE_peak_at_chr3:127492141..127492165,+ | |description=CAGE_peak_at_chr3:127492141..127492165,+ | ||
|id=chr3:127492141..127492165,+ | |id=chr3:127492141..127492165,+ | ||
|ontology_enrichment_celltype=CL:0002563!9.77e-12!9;CL:0002251!9.77e-12!9;CL:0000066!9.99e-09!25;CL:0000239!3.45e-08!6;CL:0000677!3.45e-08!6;CL:0000212!3.45e-08!6;CL:0000584!3.45e-08!6;CL:0000223!5.17e-07!20;CL:0000075!7.96e-07!7 | |ontology_enrichment_celltype=CL:0002563!9.77e-12!9;CL:0002251!9.77e-12!9;CL:0000066!9.99e-09!25;CL:0000239!3.45e-08!6;CL:0000677!3.45e-08!6;CL:0000212!3.45e-08!6;CL:0000584!3.45e-08!6;CL:0000223!5.17e-07!20;CL:0000075!7.96e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.19e-20,9;CL:0002251,1.19e-20,9;CL:0000066,7.75e-16,25;CL:0000239,5.38e-14,6;CL:0000677,5.38e-14,6;CL:0000584,5.38e-14,6;CL:0000223,4.56e-12,20;CL:0000075,6.88e-12,7;CL:0002076,1.16e-11,15;CL:0000682,1.69e-08,3;CL:0002250,3.10e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.97e-21!43;UBERON:0000344!4.26e-18!15;UBERON:0005409!1.05e-16!59;UBERON:0001242!2.92e-16!13;UBERON:0000060!2.92e-16!13;UBERON:0001262!2.92e-16!13;UBERON:0004786!2.92e-16!13;UBERON:0003350!9.77e-12!9;UBERON:0004808!9.77e-12!9;UBERON:0001277!9.77e-12!9;UBERON:0004923!2.08e-09!24;UBERON:0000485!4.14e-09!11;UBERON:0001007!8.08e-07!128;UBERON:0001555!8.08e-07!128;UBERON:0007026!8.08e-07!128 | |ontology_enrichment_uberon=UBERON:0000160!2.97e-21!43;UBERON:0000344!4.26e-18!15;UBERON:0005409!1.05e-16!59;UBERON:0001242!2.92e-16!13;UBERON:0000060!2.92e-16!13;UBERON:0001262!2.92e-16!13;UBERON:0004786!2.92e-16!13;UBERON:0003350!9.77e-12!9;UBERON:0004808!9.77e-12!9;UBERON:0001277!9.77e-12!9;UBERON:0004923!2.08e-09!24;UBERON:0000485!4.14e-09!11;UBERON:0001007!8.08e-07!128;UBERON:0001555!8.08e-07!128;UBERON:0007026!8.08e-07!128 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.60e-59,31;UBERON:0005409,3.96e-39,47;UBERON:0000344,1.24e-32,15;UBERON:0001242,3.59e-29,13;UBERON:0001262,3.59e-29,13;UBERON:0004786,3.59e-29,13;UBERON:0003350,1.19e-20,9;UBERON:0004808,1.19e-20,9;UBERON:0001277,1.19e-20,9;UBERON:0004923,5.07e-19,24;UBERON:0000485,1.45e-16,11;UBERON:0001007,4.22e-16,116;UBERON:0001555,4.22e-16,116;UBERON:0007026,4.22e-16,116;UBERON:0004119,1.06e-15,118;UBERON:0000925,1.06e-15,118;UBERON:0006595,1.06e-15,118;UBERON:0004921,3.63e-14,114;UBERON:0002108,5.55e-10,4;UBERON:0000331,4.30e-08,3;UBERON:0002116,4.30e-08,3;UBERON:0001204,4.30e-08,3;UBERON:0001168,4.30e-08,3 | |||
|phase1_expression=0,26.8711063882308,34.5799421936047,5.74682001482977,8.5152274090879,4.53274034162102,8.64366770203445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.91990907352088,2.98232065387321,22.3950466004858,22.3996238002719,19.1769397090441,39.144824408013,8.06496415231778,15.7428662565266,0,0,0,18.4865036640816,16.2909952451323,21.6419517638111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,1.15945795480671,0.860423876981386,2.03991400112325,0,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0.517875767294343,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,3.72783522436244,0,0,26.8229907969021,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,13.7514294665043,0,0,2.31961430379768,3.22693639397348,9.78463392917429,7.98947629672748,10.4396393539793,12.6818195137488,17.0907941984183,15.3196483471686,18.5215882763164,21.5716658077013,3.24207074812041,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70405924248657,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0,0,2.20345454596048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,1.03017528619447,0,0.505394423527595,0.25347929989024,0.565879024158229,0.561849044819294,0.768301828858431,0.459483751644906,0.952587382566147,0.231768651889711,0,0,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.726732083161643,0.282328141245992,0.507687647350059,0.182927972872773,0.526139422875686,0.407412341537585,0,0.355905054372522,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0.935726433781634,0.429742108096597,0,0,0 | |phase1_expression=0,26.8711063882308,34.5799421936047,5.74682001482977,8.5152274090879,4.53274034162102,8.64366770203445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.91990907352088,2.98232065387321,22.3950466004858,22.3996238002719,19.1769397090441,39.144824408013,8.06496415231778,15.7428662565266,0,0,0,18.4865036640816,16.2909952451323,21.6419517638111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,1.15945795480671,0.860423876981386,2.03991400112325,0,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0.517875767294343,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,3.72783522436244,0,0,26.8229907969021,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,13.7514294665043,0,0,2.31961430379768,3.22693639397348,9.78463392917429,7.98947629672748,10.4396393539793,12.6818195137488,17.0907941984183,15.3196483471686,18.5215882763164,21.5716658077013,3.24207074812041,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70405924248657,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0,0,2.20345454596048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,1.03017528619447,0,0.505394423527595,0.25347929989024,0.565879024158229,0.561849044819294,0.768301828858431,0.459483751644906,0.952587382566147,0.231768651889711,0,0,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.726732083161643,0.282328141245992,0.507687647350059,0.182927972872773,0.526139422875686,0.407412341537585,0,0.355905054372522,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0.935726433781634,0.429742108096597,0,0,0 | ||
|short_description=p@chr3:127492141..127492165,+ | |short_description=p@chr3:127492141..127492165,+ | ||
}} | }} |
Latest revision as of 00:18, 6 August 2015
Short description: | p@chr3:127492141..127492165, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:127492141..127492165, + |
Coexpression cluster: | MCL_coexpression_mm9:1278 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.19e-20 | 9 |
epithelial cell of alimentary canal | 1.19e-20 | 9 |
epithelial cell | 7.75e-16 | 25 |
brush border epithelial cell | 5.38e-14 | 6 |
gut absorptive cell | 5.38e-14 | 6 |
enterocyte | 5.38e-14 | 6 |
endodermal cell | 4.56e-12 | 20 |
columnar/cuboidal epithelial cell | 6.88e-12 | 7 |
endo-epithelial cell | 1.16e-11 | 15 |
M cell of gut | 1.69e-08 | 3 |
intestinal crypt stem cell | 3.10e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.60e-59 | 31 |
gastrointestinal system | 3.96e-39 | 47 |
mucosa | 1.24e-32 | 15 |
intestinal mucosa | 3.59e-29 | 13 |
wall of intestine | 3.59e-29 | 13 |
gastrointestinal system mucosa | 3.59e-29 | 13 |
epithelium of mucosa | 1.19e-20 | 9 |
gastrointestinal system epithelium | 1.19e-20 | 9 |
intestinal epithelium | 1.19e-20 | 9 |
organ component layer | 5.07e-19 | 24 |
simple columnar epithelium | 1.45e-16 | 11 |
digestive system | 4.22e-16 | 116 |
digestive tract | 4.22e-16 | 116 |
primitive gut | 4.22e-16 | 116 |
endoderm-derived structure | 1.06e-15 | 118 |
endoderm | 1.06e-15 | 118 |
presumptive endoderm | 1.06e-15 | 118 |
subdivision of digestive tract | 3.63e-14 | 114 |
small intestine | 5.55e-10 | 4 |
ileal mucosa | 4.30e-08 | 3 |
ileum | 4.30e-08 | 3 |
mucosa of small intestine | 4.30e-08 | 3 |
wall of small intestine | 4.30e-08 | 3 |