FFCP PHASE1:Mm9::chr4:129727985..129727993,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:129727985..129727993,+ | |||
|description=CAGE_peak_at_chr4:129727985..129727993,+ | |description=CAGE_peak_at_chr4:129727985..129727993,+ | ||
|id=chr4:129727985..129727993,+ | |id=chr4:129727985..129727993,+ | ||
|ontology_enrichment_celltype=CL:0000107!1.27e-34!9;CL:0002319!2.31e-15!43;CL:0000221!5.94e-15!44;CL:0000133!5.94e-15!44;CL:0000055!6.60e-15!50;CL:0002321!7.88e-10!70;CL:0000220!7.88e-10!70;CL:0000333!1.98e-09!10;CL:0000095!1.98e-09!10;CL:0000243!1.98e-09!10;CL:0000123!1.98e-09!10;CL:0000125!1.98e-09!10;CL:0000030!1.98e-09!10;CL:0000339!1.98e-09!10;CL:0000325!1.06e-08!2;CL:0000217!1.06e-08!2;CL:0000328!1.06e-08!2;CL:0002573!1.06e-08!2;CL:0002376!1.06e-08!2;CL:0000218!1.06e-08!2;CL:0000692!1.06e-08!2;CL:0002377!1.06e-08!2;CL:0002375!1.06e-08!2;CL:0000393!1.65e-08!39;CL:0000211!1.65e-08!39;CL:0000540!2.20e-08!33;CL:0000047!2.20e-08!33;CL:0000031!2.20e-08!33;CL:0000404!2.20e-08!33;CL:0000144!4.57e-08!121;CL:0000012!4.57e-08!121 | |ontology_enrichment_celltype=CL:0000107!1.27e-34!9;CL:0002319!2.31e-15!43;CL:0000221!5.94e-15!44;CL:0000133!5.94e-15!44;CL:0000055!6.60e-15!50;CL:0002321!7.88e-10!70;CL:0000220!7.88e-10!70;CL:0000333!1.98e-09!10;CL:0000095!1.98e-09!10;CL:0000243!1.98e-09!10;CL:0000123!1.98e-09!10;CL:0000125!1.98e-09!10;CL:0000030!1.98e-09!10;CL:0000339!1.98e-09!10;CL:0000325!1.06e-08!2;CL:0000217!1.06e-08!2;CL:0000328!1.06e-08!2;CL:0002573!1.06e-08!2;CL:0002376!1.06e-08!2;CL:0000218!1.06e-08!2;CL:0000692!1.06e-08!2;CL:0002377!1.06e-08!2;CL:0002375!1.06e-08!2;CL:0000393!1.65e-08!39;CL:0000211!1.65e-08!39;CL:0000540!2.20e-08!33;CL:0000047!2.20e-08!33;CL:0000031!2.20e-08!33;CL:0000404!2.20e-08!33;CL:0000144!4.57e-08!121;CL:0000012!4.57e-08!121 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,9.83e-62,9;CL:0002319,5.82e-20,43;CL:0000221,1.69e-19,44;CL:0000133,1.69e-19,44;CL:0000540,1.07e-16,33;CL:0000047,1.07e-16,33;CL:0000031,1.07e-16,33;CL:0000404,1.07e-16,33;CL:0000393,4.45e-14,39;CL:0000211,4.45e-14,39;CL:0002321,4.32e-12,70;CL:0000723,2.36e-07,91;CL:0000048,2.36e-07,91;CL:0000034,7.36e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!7.85e-42!11;UBERON:0002410!1.27e-34!9;UBERON:0000011!4.32e-13!3;UBERON:0000013!1.50e-12!3;UBERON:0002005!3.59e-12!3;UBERON:0005428!3.59e-12!3;UBERON:0004121!9.28e-08!102;UBERON:0000924!9.28e-08!102;UBERON:0006601!9.28e-08!102;UBERON:0000073!1.13e-07!75;UBERON:0001016!1.13e-07!75 | |ontology_enrichment_uberon=UBERON:0000010!7.85e-42!11;UBERON:0002410!1.27e-34!9;UBERON:0000011!4.32e-13!3;UBERON:0000013!1.50e-12!3;UBERON:0002005!3.59e-12!3;UBERON:0005428!3.59e-12!3;UBERON:0004121!9.28e-08!102;UBERON:0000924!9.28e-08!102;UBERON:0006601!9.28e-08!102;UBERON:0000073!1.13e-07!75;UBERON:0001016!1.13e-07!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,9.60e-64,11;UBERON:0002410,9.83e-62,9;UBERON:0000011,7.38e-28,3;UBERON:0000013,1.28e-26,3;UBERON:0010313,2.42e-12,3;UBERON:0002342,2.42e-12,3;UBERON:0002005,2.42e-12,3;UBERON:0005428,2.42e-12,3;UBERON:0005062,2.42e-12,3;UBERON:0001016,2.99e-11,75;UBERON:0001017,2.59e-09,73;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0.419959264876088,0,0,0,0,0,0.85960031981627,0,0,0,0,0.338844532069132,0,0,0,0,2.39680088414724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,1.81371744256285,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,1.56175497718655,1.50796378412959,3.58453196928828,5.79276552614225,4.81230102341015,2.02405350837447,1.46127928955656,3.16230222357219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0.419959264876088,0,0,0,0,0,0.85960031981627,0,0,0,0,0.338844532069132,0,0,0,0,2.39680088414724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,1.81371744256285,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,1.56175497718655,1.50796378412959,3.58453196928828,5.79276552614225,4.81230102341015,2.02405350837447,1.46127928955656,3.16230222357219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:129727985..129727993,+ | |short_description=p@chr4:129727985..129727993,+ | ||
}} | }} |
Latest revision as of 20:00, 4 August 2015
Short description: | p@chr4:129727985..129727993, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:129727985..129727993, + |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 9.83e-62 | 9 |
neural cell | 5.82e-20 | 43 |
ectodermal cell | 1.69e-19 | 44 |
neurectodermal cell | 1.69e-19 | 44 |
neuron | 1.07e-16 | 33 |
neuronal stem cell | 1.07e-16 | 33 |
neuroblast | 1.07e-16 | 33 |
electrically signaling cell | 1.07e-16 | 33 |
electrically responsive cell | 4.45e-14 | 39 |
electrically active cell | 4.45e-14 | 39 |
embryonic cell | 4.32e-12 | 70 |
somatic stem cell | 2.36e-07 | 91 |
multi fate stem cell | 2.36e-07 | 91 |
stem cell | 7.36e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 9.60e-64 | 11 |
autonomic nervous system | 9.83e-62 | 9 |
parasympathetic nervous system | 7.38e-28 | 3 |
sympathetic nervous system | 1.28e-26 | 3 |
neural crest-derived structure | 2.42e-12 | 3 |
neural crest | 2.42e-12 | 3 |
enteric nervous system | 2.42e-12 | 3 |
vagal neural crest | 2.42e-12 | 3 |
neural fold | 2.42e-12 | 3 |
nervous system | 2.99e-11 | 75 |
central nervous system | 2.59e-09 | 73 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |