FFCP PHASE1:Mm9::chr4:140971885..140971912,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56365 | |EntrezGene=56365 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WUB6,A2ADB7 | |UniProt=Q9WUB6,A2ADB7 | ||
|association_with_transcript=0bp_to_NM_019701,uc008voh.2,uc008voi.2,uc012dob.1_5end | |association_with_transcript=0bp_to_NM_019701,uc008voh.2,uc008voi.2,uc012dob.1_5end | ||
|cluster_id=chr4:140971885..140971912,- | |||
|description=CAGE_peak_1_at_Clcnkb_5end | |description=CAGE_peak_1_at_Clcnkb_5end | ||
|id=chr4:140971885..140971912,- | |id=chr4:140971885..140971912,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!3.21e-19!14;UBERON:0003918!3.21e-19!14;UBERON:0005095!3.21e-19!14;UBERON:0007687!3.21e-19!14;UBERON:0006554!2.05e-16!16;UBERON:0001008!2.92e-15!17;UBERON:0000489!9.36e-12!21 | |ontology_enrichment_uberon=UBERON:0002113!3.21e-19!14;UBERON:0003918!3.21e-19!14;UBERON:0005095!3.21e-19!14;UBERON:0007687!3.21e-19!14;UBERON:0006554!2.05e-16!16;UBERON:0001008!2.92e-15!17;UBERON:0000489!9.36e-12!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.91e-39,14;UBERON:0003918,3.91e-39,14;UBERON:0011143,3.91e-39,14;UBERON:0005095,3.91e-39,14;UBERON:0007687,3.91e-39,14;UBERON:0006554,3.41e-30,18;UBERON:0001008,1.52e-28,19;UBERON:0000489,1.02e-25,21;UBERON:0003103,6.31e-12,43;UBERON:0005172,2.63e-10,49;UBERON:0005173,2.63e-10,49;UBERON:0002417,2.63e-10,49;UBERON:0000916,2.63e-10,49;UBERON:0003104,5.15e-08,61;UBERON:0009142,5.15e-08,61;UBERON:0009569,2.64e-07,66;UBERON:0001044,5.34e-07,1;UBERON:0001736,5.34e-07,1;UBERON:0003293,5.34e-07,1;UBERON:0003294,5.34e-07,1;UBERON:0001829,5.34e-07,1;UBERON:0010047,5.34e-07,1;UBERON:0000167,5.34e-07,1;UBERON:0006298,5.34e-07,1 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73893940374735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63466586434781,0,0,0,0,0,0,0,0,0,0,3.9964357901671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,5.05445516867349,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,1.5994791765362,11.270773567308,6.72049381889537,15.9041039477453,22.8642772842439,47.9965316773113,52.1063822367996,40.8196692387574,56.3925039122628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.485561272309963,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6401793926078,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.618105171716683,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.749132059759059,0.256100609619477,0.689225627467359,0.952587382566147,0.347652977834566,0,0.412085900803307,0.147198920134397,0,0,0,0.290692833264657,0.282328141245992,0.25384382367503,0.365855945745545,0,0.135804113845862,0.561142271657738,0.593175090620871,0.492522411877817,1.22769312950907,0.154936841185966,0.192906610981141,0,0.935726433781634,1.28922632428979,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73893940374735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63466586434781,0,0,0,0,0,0,0,0,0,0,3.9964357901671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,5.05445516867349,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,1.5994791765362,11.270773567308,6.72049381889537,15.9041039477453,22.8642772842439,47.9965316773113,52.1063822367996,40.8196692387574,56.3925039122628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.485561272309963,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6401793926078,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.618105171716683,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.749132059759059,0.256100609619477,0.689225627467359,0.952587382566147,0.347652977834566,0,0.412085900803307,0.147198920134397,0,0,0,0.290692833264657,0.282328141245992,0.25384382367503,0.365855945745545,0,0.135804113845862,0.561142271657738,0.593175090620871,0.492522411877817,1.22769312950907,0.154936841185966,0.192906610981141,0,0.935726433781634,1.28922632428979,0,0,0 | ||
|short_description=p1@Clcnkb | |short_description=p1@Clcnkb | ||
}} | }} |
Latest revision as of 15:25, 26 September 2015
Short description: | p1@Clcnkb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Clcnkb_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_NM_019701, uc008voh.2, uc008voi.2, uc012dob.1_5end |
EntrezGene: | Clcnkb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 3.91e-39 | 14 |
kidney mesenchyme | 3.91e-39 | 14 |
upper urinary tract | 3.91e-39 | 14 |
kidney rudiment | 3.91e-39 | 14 |
kidney field | 3.91e-39 | 14 |
urinary system structure | 3.41e-30 | 18 |
renal system | 1.52e-28 | 19 |
cavitated compound organ | 1.02e-25 | 21 |
compound organ | 6.31e-12 | 43 |
abdomen element | 2.63e-10 | 49 |
abdominal segment element | 2.63e-10 | 49 |
abdominal segment of trunk | 2.63e-10 | 49 |
abdomen | 2.63e-10 | 49 |
mesenchyme | 5.15e-08 | 61 |
entire embryonic mesenchyme | 5.15e-08 | 61 |
subdivision of trunk | 2.64e-07 | 66 |
saliva-secreting gland | 5.34e-07 | 1 |
submandibular gland | 5.34e-07 | 1 |
gland of oral region | 5.34e-07 | 1 |
gland of foregut | 5.34e-07 | 1 |
major salivary gland | 5.34e-07 | 1 |
oral gland | 5.34e-07 | 1 |
oral cavity | 5.34e-07 | 1 |
submandibular gland primordium | 5.34e-07 | 1 |