FFCP PHASE1:Mm9::chr4:150240662..150240682,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=221 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:150240662..150240682,+ | |||
|description=CAGE_peak_at_chr4:150240662..150240682,+ | |description=CAGE_peak_at_chr4:150240662..150240682,+ | ||
|id=chr4:150240662..150240682,+ | |id=chr4:150240662..150240682,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.58e-09,5;CL:0000068,1.39e-07,3;CL:0002202,1.39e-07,3;CL:0000069,1.39e-07,3;CL:0002632,1.39e-07,3;CL:0002368,1.39e-07,3;CL:0000307,1.39e-07,3;CL:0000377,1.39e-07,3;CL:0002494,1.90e-07,3;CL:0000737,1.90e-07,3;CL:0000746,1.90e-07,3;CL:0000513,1.90e-07,3;CL:0000223,6.61e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.97e-09!22;UBERON:0007499!3.97e-09!22;UBERON:0006925!3.97e-09!22;UBERON:0009497!3.97e-09!22;UBERON:0000015!3.97e-09!22;UBERON:0002423!3.97e-09!22;UBERON:0006235!3.97e-09!22;UBERON:0008835!3.97e-09!22;UBERON:0003894!3.97e-09!22;UBERON:0004161!3.97e-09!22;UBERON:0008836!3.97e-09!22;UBERON:0002365!6.12e-09!25;UBERON:0002330!6.12e-09!25;UBERON:0009854!2.81e-08!23;UBERON:0009856!2.81e-08!23;UBERON:0009569!7.39e-07!66;UBERON:0003914!8.78e-07!47 | |ontology_enrichment_uberon=UBERON:0002107!3.97e-09!22;UBERON:0007499!3.97e-09!22;UBERON:0006925!3.97e-09!22;UBERON:0009497!3.97e-09!22;UBERON:0000015!3.97e-09!22;UBERON:0002423!3.97e-09!22;UBERON:0006235!3.97e-09!22;UBERON:0008835!3.97e-09!22;UBERON:0003894!3.97e-09!22;UBERON:0004161!3.97e-09!22;UBERON:0008836!3.97e-09!22;UBERON:0002365!6.12e-09!25;UBERON:0002330!6.12e-09!25;UBERON:0009854!2.81e-08!23;UBERON:0009856!2.81e-08!23;UBERON:0009569!7.39e-07!66;UBERON:0003914!8.78e-07!47 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.24e-23,22;UBERON:0007499,4.24e-23,22;UBERON:0006925,4.24e-23,22;UBERON:0009497,4.24e-23,22;UBERON:0000015,4.24e-23,22;UBERON:0002423,4.24e-23,22;UBERON:0006235,4.24e-23,22;UBERON:0008835,4.24e-23,22;UBERON:0003894,4.24e-23,22;UBERON:0004161,4.24e-23,22;UBERON:0008836,4.24e-23,22;UBERON:0009854,6.23e-22,23;UBERON:0009856,6.23e-22,23;UBERON:0002365,7.05e-20,25;UBERON:0002330,7.05e-20,25;UBERON:0005256,9.20e-16,45;UBERON:0003914,6.81e-15,47;UBERON:0000490,9.26e-12,66;UBERON:0003104,1.26e-11,61;UBERON:0009142,1.26e-11,61;UBERON:0002100,3.32e-11,90;UBERON:0009569,2.14e-10,66;UBERON:0005172,1.52e-09,49;UBERON:0005173,1.52e-09,49;UBERON:0002417,1.52e-09,49;UBERON:0000916,1.52e-09,49;UBERON:0003929,2.16e-09,55;UBERON:0005177,7.49e-09,79;UBERON:0001041,7.67e-09,80;UBERON:0002368,2.81e-08,60;UBERON:0005911,1.22e-07,69;UBERON:0003126,1.39e-07,3;UBERON:0001005,1.39e-07,3;UBERON:0007196,1.39e-07,3;UBERON:0001558,1.39e-07,3;UBERON:0002530,2.43e-07,65;UBERON:0000949,4.23e-07,72 | |||
|phase1_expression=0,0,0,0.90739263392049,0,0,0,0,1.267098499365,0.468129052643987,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,1.65192076945513,1.56478268869608,0.218025156380447,0.219686182734472,1.36100929351998,0.699932108126813,0,0,1.45072428402269,0.672187598284928,3.8588915405392,1.71920063963254,1.03134418455488,0.202316460859598,0,0,0.677689064138264,0,0.899899717281399,0.988866362566974,0.7104801149461,0,0,0.207379224616955,0.270011876663381,0,0.285650984403804,0.220868540951614,0,0.191690942036473,0,0,0.510749352340751,0.153606533256243,0,0.182975287204819,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.284743361598206,0.186399445825301,0.227178579999552,0.0755715601067855,0.869593466105033,6.0229671388697,32.638624017972,25.3660500069774,40.2861378817555,22.8493712419641,2.52799956237153,0.681721290312231,0.779358013808606,0.70667914902068,0,2.56652954828636,0,0,1.29894624606728,2.02687892380079,2.02209778005913,6.05174562511018,0.776813650941515,0.445326417194474,0.173485326766136,0,0.230615497256059,0,0,0,0.741584903203122,0.289198713839823,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0.11981512450592,0,0,0,0,0.125654352112864,0,0.255715457330331,0,0.162241263067758,0.407357455401265,0,0.252722758433675,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0.234526059981096,0.36012412292203,0,0,0,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0.219550115291051,0.134206418760372,0.210289948564127,0,0.991256348951394,1.05780226665418,0.426576501070468,0,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0.329397909448022,0,0.397912944082302,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.316182685621286,1.03327103585722,0.627994911365499,0.740382983530803,6.52195779591728,0,0,0.224862112384854,0,0.72353147925725,0.25462585178142,1.72617682470486,7.94462611197673,1.64736847912849,28.7536413054709,1.48856379067401,1.87222603868736,2.27320990152401,2.69096120282868,7.23665282045051,0.184753190166605,0.568474235311454,0.325929952884052,0,0.704070744865506,0.167506257441816,0.476087281772027,0.585400943573396,0,0.221464689648775,0.637819074629948,1.47476983244164,0.345369963731791,0.867894351489069,0,0,0,0.551873492609465,0.481651769963376,0.117211686592203,0.327869890753351,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.651547837414304,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.532020700926821,0.713475270408282,0.164549020602121,0.304464949114599,3.75474732901937,0.847328283455281,0.220528398054962,0.32977250588296,0.968786560175433,0.120625849856312,0,0,0.291480836629851,0.370850604021019,0,0,0,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0,0.324016022465404,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.648074866458964,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0,0.39061315453185,0.314578033277133,0.241584120826006,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0,0,0,0.201932899896295,0,0,0.0974578807397524,0,0.350630706544707,0.226730383615211,0.221985953374065,1.25599399253266,1.17519231454855,0,1.68914227906064,0.183151624267265,0.643105137237198,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0.505394423527595,0.25347929989024,0.377252682772152,0.37456602987953,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.578727661391115,0,0.294397840268795,0,0.70990322463735,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,1.12228454331548,0,0,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0,1.14772999241306,0,0 | |phase1_expression=0,0,0,0.90739263392049,0,0,0,0,1.267098499365,0.468129052643987,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,1.65192076945513,1.56478268869608,0.218025156380447,0.219686182734472,1.36100929351998,0.699932108126813,0,0,1.45072428402269,0.672187598284928,3.8588915405392,1.71920063963254,1.03134418455488,0.202316460859598,0,0,0.677689064138264,0,0.899899717281399,0.988866362566974,0.7104801149461,0,0,0.207379224616955,0.270011876663381,0,0.285650984403804,0.220868540951614,0,0.191690942036473,0,0,0.510749352340751,0.153606533256243,0,0.182975287204819,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.284743361598206,0.186399445825301,0.227178579999552,0.0755715601067855,0.869593466105033,6.0229671388697,32.638624017972,25.3660500069774,40.2861378817555,22.8493712419641,2.52799956237153,0.681721290312231,0.779358013808606,0.70667914902068,0,2.56652954828636,0,0,1.29894624606728,2.02687892380079,2.02209778005913,6.05174562511018,0.776813650941515,0.445326417194474,0.173485326766136,0,0.230615497256059,0,0,0,0.741584903203122,0.289198713839823,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0.11981512450592,0,0,0,0,0.125654352112864,0,0.255715457330331,0,0.162241263067758,0.407357455401265,0,0.252722758433675,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0.234526059981096,0.36012412292203,0,0,0,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0.219550115291051,0.134206418760372,0.210289948564127,0,0.991256348951394,1.05780226665418,0.426576501070468,0,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0.329397909448022,0,0.397912944082302,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.316182685621286,1.03327103585722,0.627994911365499,0.740382983530803,6.52195779591728,0,0,0.224862112384854,0,0.72353147925725,0.25462585178142,1.72617682470486,7.94462611197673,1.64736847912849,28.7536413054709,1.48856379067401,1.87222603868736,2.27320990152401,2.69096120282868,7.23665282045051,0.184753190166605,0.568474235311454,0.325929952884052,0,0.704070744865506,0.167506257441816,0.476087281772027,0.585400943573396,0,0.221464689648775,0.637819074629948,1.47476983244164,0.345369963731791,0.867894351489069,0,0,0,0.551873492609465,0.481651769963376,0.117211686592203,0.327869890753351,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.651547837414304,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.532020700926821,0.713475270408282,0.164549020602121,0.304464949114599,3.75474732901937,0.847328283455281,0.220528398054962,0.32977250588296,0.968786560175433,0.120625849856312,0,0,0.291480836629851,0.370850604021019,0,0,0,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0,0.324016022465404,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.648074866458964,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0,0.39061315453185,0.314578033277133,0.241584120826006,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0,0,0,0.201932899896295,0,0,0.0974578807397524,0,0.350630706544707,0.226730383615211,0.221985953374065,1.25599399253266,1.17519231454855,0,1.68914227906064,0.183151624267265,0.643105137237198,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0.505394423527595,0.25347929989024,0.377252682772152,0.37456602987953,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.578727661391115,0,0.294397840268795,0,0.70990322463735,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,1.12228454331548,0,0,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0,1.14772999241306,0,0 | ||
|short_description=p@chr4:150240662..150240682,+ | |short_description=p@chr4:150240662..150240682,+ | ||
}} | }} |
Latest revision as of 05:37, 5 August 2015
Short description: | p@chr4:150240662..150240682, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:150240662..150240682, + |
Coexpression cluster: | MCL_coexpression_mm9:221 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.58e-09 | 5 |
duct epithelial cell | 1.39e-07 | 3 |
epithelial cell of tracheobronchial tree | 1.39e-07 | 3 |
branched duct epithelial cell | 1.39e-07 | 3 |
epithelial cell of lower respiratory tract | 1.39e-07 | 3 |
respiratory epithelial cell | 1.39e-07 | 3 |
tracheal epithelial cell | 1.39e-07 | 3 |
tracheoblast | 1.39e-07 | 3 |
cardiocyte | 1.90e-07 | 3 |
striated muscle cell | 1.90e-07 | 3 |
cardiac muscle cell | 1.90e-07 | 3 |
cardiac muscle myoblast | 1.90e-07 | 3 |
endodermal cell | 6.61e-07 | 20 |