FFCP PHASE1:Hg19::chr13:78184183..78184187,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:78184183..78184187,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr13:78184183..78184187,+ | |description=CAGE_peak_at_chr13:78184183..78184187,+ | ||
|id=chr13:78184183..78184187,+ | |id=chr13:78184183..78184187,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.31e-16!43;CL:0000066!6.24e-14!254;CL:0000223!4.73e-12!59;CL:0000349!2.18e-09!3;CL:0002577!2.18e-09!3;CL:0002541!2.45e-09!3;CL:0002251!4.88e-09!21 | |ontology_enrichment_celltype=CL:0002076!2.31e-16!43;CL:0000066!6.24e-14!254;CL:0000223!4.73e-12!59;CL:0000349!2.18e-09!3;CL:0002577!2.18e-09!3;CL:0002541!2.45e-09!3;CL:0002251!4.88e-09!21 | ||
|ontology_enrichment_celltype_v019=CL:0002541;8.43e-16;3!CL:0000349;1.10e-14;19!CL:0000342;3.08e-12;1!CL:0002565;3.08e-12;1!CL:0002537;3.80e-10;5!CL:1000415;9.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.80e-16,3;CL:0000349,1.06e-14,19;CL:0000342,4.31e-12,1;CL:0002565,4.31e-12,1;CL:0002537,3.80e-10,5;CL:1000415,8.52e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.40e-12;1!UBERON:0008814;6.42e-07;2!UBERON:0010056;6.42e-07;2 | |||
|ontology_enrichment_disease=DOID:305!6.28e-09!106;DOID:4468!2.28e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;3.12e-23;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.99e-23,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.36e-19!14;UBERON:0000158!2.36e-19!14;UBERON:0003124!1.76e-14!7;UBERON:0004119!8.17e-11!169;UBERON:0000925!8.17e-11!169;UBERON:0006595!8.17e-11!169;UBERON:0000478!2.36e-10!24;UBERON:0001004!3.00e-10!72;UBERON:0004923!5.38e-10!57;UBERON:0000344!8.16e-10!12;UBERON:0001723!8.47e-10!3;UBERON:0001033!8.47e-10!3;UBERON:0010056!8.47e-10!3;UBERON:0000166!2.07e-09!21;UBERON:0000476!2.45e-09!3;UBERON:0000920!2.45e-09!3;UBERON:0000161!5.62e-09!35;UBERON:0005795!5.83e-09!22;UBERON:0003729!7.57e-09!5;UBERON:0000065!4.07e-08!53;UBERON:0000165!4.35e-08!28;UBERON:0000930!4.35e-08!28;UBERON:0000995!1.64e-07!21;UBERON:0000305!3.13e-07!7;UBERON:0000064!3.59e-07!219;UBERON:0001987!4.00e-07!4;UBERON:0004340!4.00e-07!4;UBERON:0003975!4.17e-07!22;UBERON:0000077!5.80e-07!130;UBERON:0001444!6.32e-07!48;UBERON:0000488!7.74e-07!4;UBERON:0003343!8.23e-07!4;UBERON:0004785!8.23e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.51e-18;10!UBERON:0000158;2.51e-18;10!UBERON:0003124;8.43e-16;3!UBERON:0000920;8.43e-16;3!UBERON:0001723;1.05e-15;3!UBERON:0001033;1.05e-15;3!UBERON:0002171;1.40e-12;1!UBERON:0006518;1.40e-12;1!UBERON:0008949;1.40e-12;1!UBERON:0000101;1.40e-12;1!UBERON:0002167;1.40e-12;1!UBERON:0002506;3.08e-12;1!UBERON:0001769;3.08e-12;1!UBERON:0000478;1.30e-11;24!UBERON:0000305;1.72e-07;7!UBERON:0000341;9.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.88e-20,14;UBERON:0000158,5.88e-20,14;UBERON:0000920,9.80e-16,3;UBERON:0001723,1.65e-15,3;UBERON:0001033,1.65e-15,3;UBERON:0010056,1.65e-15,3;UBERON:0003124,8.10e-15,7;UBERON:0002171,1.11e-12,1;UBERON:0006518,1.11e-12,1;UBERON:0008949,1.11e-12,1;UBERON:0000101,1.11e-12,1;UBERON:0002167,1.11e-12,1;UBERON:0002506,4.31e-12,1;UBERON:0001769,4.31e-12,1;UBERON:0000478,1.27e-11,24;UBERON:0000305,1.72e-07,7;UBERON:0000341,9.02e-07,2 | |||
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| ||
|short_description=p@chr13:78184183..78184187,+ | |short_description=p@chr13:78184183..78184187,+ | ||
}} | }} |
Latest revision as of 17:14, 24 July 2015
Short description: | p@chr13:78184183..78184187, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:78184183..78184187, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.80e-16 | 3 |
extraembryonic cell | 1.06e-14 | 19 |
pigment cell (sensu Vertebrata) | 4.31e-12 | 1 |
iris pigment epithelial cell | 4.31e-12 | 1 |
amnion mesenchymal stem cell | 3.80e-10 | 5 |
epithelial cell of gall bladder | 8.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.88e-20 | 14 |
membranous layer | 5.88e-20 | 14 |
egg chorion | 9.80e-16 | 3 |
tongue | 1.65e-15 | 3 |
gustatory system | 1.65e-15 | 3 |
future tongue | 1.65e-15 | 3 |
chorion | 8.10e-15 | 7 |
lower lobe of right lung | 1.11e-12 | 1 |
right lung lobe | 1.11e-12 | 1 |
lower lobe of lung | 1.11e-12 | 1 |
lobe of lung | 1.11e-12 | 1 |
right lung | 1.11e-12 | 1 |
iris epithelium | 4.31e-12 | 1 |
iris | 4.31e-12 | 1 |
extraembryonic structure | 1.27e-11 | 24 |
amnion | 1.72e-07 | 7 |
throat | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.99e-23 | 2 |