FFCP PHASE1:Hg19::chr10:127758703..127758709,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:127758703..127758709,- | |||
|description=CAGE_peak_at_chr10:127758703..127758709,- | |description=CAGE_peak_at_chr10:127758703..127758709,- | ||
|id=chr10:127758703..127758709,- | |id=chr10:127758703..127758709,- | ||
|ontology_enrichment_celltype=CL:0002620!6.99e-12!23 | |ontology_enrichment_celltype=CL:0002620!6.99e-12!23 | ||
|ontology_enrichment_celltype_v019=CL:0002568;3.11e-11;1!CL:0002620;9.60e-11;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002568,3.28e-11,1;CL:0002620,9.31e-11,23 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.61e-12;1!UBERON:0000358;1.30e-11;1 | |||
|ontology_enrichment_disease=DOID:2394!1.75e-11!14;DOID:17!5.54e-08!5;DOID:450!5.54e-08!5;DOID:66!5.54e-08!5;DOID:423!5.54e-08!5;DOID:0080000!5.54e-08!5;DOID:11722!5.54e-08!5 | |ontology_enrichment_disease=DOID:2394!1.75e-11!14;DOID:17!5.54e-08!5;DOID:450!5.54e-08!5;DOID:66!5.54e-08!5;DOID:423!5.54e-08!5;DOID:0080000!5.54e-08!5;DOID:11722!5.54e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:17;7.54e-09;5!DOID:450;7.54e-09;5!DOID:66;7.54e-09;5!DOID:423;7.54e-09;5!DOID:0080000;7.54e-09;5!DOID:11722;7.54e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.70e-09,5;DOID:450,6.70e-09,5;DOID:66,6.70e-09,5;DOID:423,6.70e-09,5;DOID:0080000,6.70e-09,5;DOID:11722,6.70e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!4.70e-07!45;UBERON:0002416!4.70e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.79e-10;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,2.04e-10,24;UBERON:0005631,4.53e-07,14;UBERON:0000158,4.53e-07,14;UBERON:0003124,7.46e-07,7 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0.283604451492204,0.665188192387692,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,1.43418310374407,0.354668382198357,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,1.25572744982203,0.640672166455702,1.90738711043606,0.600182192168805,0.309157587715317,1.28820270022815,0.18611685633159,1.35021065793013,0.292311015483596,3.02920529092937,0.0920498986422993,0.484938170456436,0.355009592516614,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49682337822484,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,1.29271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.821905290201534,0,0,0.197030760201927,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0.831883446123229,0.535286966391485,0.630809660135739,0.234282829985426,0,0,0,0,0.184369168541703,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,2.7821073144885,0,0,0,0,0,0,0.462145851343933,0.460511024178389,0,0,0.290033387828457,0.255679882248303,0.356128142586949,0,0,0,0,0,1.25924938732256,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0.281338832821026,0.111308705022906,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.957003479195758,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0.447764408660622,1.16856654923612,0.554805861502613,0.378806010550178,0.754703705257725,0,0.228840068396924,0.302461847526478,0.932623203496683,0.443565449968902,0,0.899606224327209,0.310525913752519,1.65882483136342,0.53168342911599,0.521745061811734,0.450772826991655,0.761610424337591,0.813741466409323,0.727394636810238,0.537052785212442,0,1.59238355479446,0,0.343395705182793,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0.38582807654183,0.168942440653073,0,0,0,0.138258436151731,1.55888247071511,0.132864840313363,0.490696182767533,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0.128458450192919,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0,6.38657065171,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0.9555033757741,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0.286679166302903,0.157771562193185,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0.642301571672949,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0.283604451492204,0.665188192387692,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,1.43418310374407,0.354668382198357,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,1.25572744982203,0.640672166455702,1.90738711043606,0.600182192168805,0.309157587715317,1.28820270022815,0.18611685633159,1.35021065793013,0.292311015483596,3.02920529092937,0.0920498986422993,0.484938170456436,0.355009592516614,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49682337822484,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,1.29271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.821905290201534,0,0,0.197030760201927,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0.831883446123229,0.535286966391485,0.630809660135739,0.234282829985426,0,0,0,0,0.184369168541703,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,2.7821073144885,0,0,0,0,0,0,0.462145851343933,0.460511024178389,0,0,0.290033387828457,0.255679882248303,0.356128142586949,0,0,0,0,0,1.25924938732256,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0.281338832821026,0.111308705022906,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.957003479195758,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0.447764408660622,1.16856654923612,0.554805861502613,0.378806010550178,0.754703705257725,0,0.228840068396924,0.302461847526478,0.932623203496683,0.443565449968902,0,0.899606224327209,0.310525913752519,1.65882483136342,0.53168342911599,0.521745061811734,0.450772826991655,0.761610424337591,0.813741466409323,0.727394636810238,0.537052785212442,0,1.59238355479446,0,0.343395705182793,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0.38582807654183,0.168942440653073,0,0,0,0.138258436151731,1.55888247071511,0.132864840313363,0.490696182767533,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0.128458450192919,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0,6.38657065171,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0.9555033757741,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0.286679166302903,0.157771562193185,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr10:127758703..127758709,- | |short_description=p@chr10:127758703..127758709,- | ||
}} | }} |
Latest revision as of 11:29, 23 July 2015
Short description: | p@chr10:127758703..127758709, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:127758703..127758709, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of Wharton's jelly | 3.28e-11 | 1 |
skin fibroblast | 9.31e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 2.04e-10 | 24 |
extraembryonic membrane | 4.53e-07 | 14 |
membranous layer | 4.53e-07 | 14 |
chorion | 7.46e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.70e-09 | 5 |
myotonic disease | 6.70e-09 | 5 |
muscle tissue disease | 6.70e-09 | 5 |
myopathy | 6.70e-09 | 5 |
muscular disease | 6.70e-09 | 5 |
myotonic dystrophy | 6.70e-09 | 5 |