FFCP PHASE1:Hg19::chr10:19335841..19335870,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:19335841..19335870,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr10:19335841..19335870,+ | |description=CAGE_peak_at_chr10:19335841..19335870,+ | ||
|id=chr10:19335841..19335870,+ | |id=chr10:19335841..19335870,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.05e-20!4;CL:0002253!4.09e-11!2;CL:0002231!5.93e-08!3 | |ontology_enrichment_celltype=CL:0002563!1.05e-20!4;CL:0002253!4.09e-11!2;CL:0002231!5.93e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002231;1.09e-10;3!CL:0002563;2.11e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,9.90e-11,3;CL:0002563,2.11e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.85e-34!27;UBERON:0005409!8.52e-27!35;UBERON:0001242!1.05e-20!4;UBERON:0001262!1.05e-20!4;UBERON:0004786!1.05e-20!4;UBERON:0004808!1.05e-20!4;UBERON:0001277!1.05e-20!4;UBERON:0001155!2.26e-20!9;UBERON:0000059!8.34e-17!11;UBERON:0003350!8.82e-17!5;UBERON:0002108!1.06e-12!14;UBERON:0004921!5.91e-12!129;UBERON:0004185!5.91e-12!129;UBERON:0001007!6.98e-10!155;UBERON:0001555!6.98e-10!155;UBERON:0007026!6.98e-10!155;UBERON:0000485!9.24e-10!9;UBERON:0004119!5.02e-09!169;UBERON:0000925!5.02e-09!169;UBERON:0006595!5.02e-09!169;UBERON:0000344!1.52e-07!12;UBERON:0000060!1.52e-07!12 | |ontology_enrichment_uberon=UBERON:0000160!1.85e-34!27;UBERON:0005409!8.52e-27!35;UBERON:0001242!1.05e-20!4;UBERON:0001262!1.05e-20!4;UBERON:0004786!1.05e-20!4;UBERON:0004808!1.05e-20!4;UBERON:0001277!1.05e-20!4;UBERON:0001155!2.26e-20!9;UBERON:0000059!8.34e-17!11;UBERON:0003350!8.82e-17!5;UBERON:0002108!1.06e-12!14;UBERON:0004921!5.91e-12!129;UBERON:0004185!5.91e-12!129;UBERON:0001007!6.98e-10!155;UBERON:0001555!6.98e-10!155;UBERON:0007026!6.98e-10!155;UBERON:0000485!9.24e-10!9;UBERON:0004119!5.02e-09!169;UBERON:0000925!5.02e-09!169;UBERON:0006595!5.02e-09!169;UBERON:0000344!1.52e-07!12;UBERON:0000060!1.52e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.11e-51;4!UBERON:0000160;1.59e-39;17!UBERON:0005409;4.62e-31;22!UBERON:0004921;2.49e-18;33!UBERON:0002114;1.09e-10;2!UBERON:0001555;6.87e-09;54!UBERON:0001242;2.11e-08;4!UBERON:0001262;2.11e-08;4!UBERON:0004786;2.11e-08;4!UBERON:0004808;2.11e-08;4!UBERON:0001277;2.11e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.94e-51,4;UBERON:0000160,1.59e-39,17;UBERON:0005409,1.53e-27,25;UBERON:0002114,1.09e-10,2;UBERON:0004921,8.24e-09,118;UBERON:0001242,2.11e-08,4;UBERON:0001262,2.11e-08,4;UBERON:0004786,2.11e-08,4;UBERON:0004808,2.11e-08,4;UBERON:0001277,2.11e-08,4;UBERON:0001007,3.33e-07,145;UBERON:0001555,3.33e-07,145;UBERON:0007026,3.33e-07,145 | |||
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|short_description=p@chr10:19335841..19335870,+ | |short_description=p@chr10:19335841..19335870,+ | ||
}} | }} |
Latest revision as of 12:26, 23 July 2015
Short description: | p@chr10:19335841..19335870, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:19335841..19335870, + |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 9.90e-11 | 3 |
intestinal epithelial cell | 2.11e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.94e-51 | 4 |
intestine | 1.59e-39 | 17 |
gastrointestinal system | 1.53e-27 | 25 |
duodenum | 1.09e-10 | 2 |
subdivision of digestive tract | 8.24e-09 | 118 |
intestinal mucosa | 2.11e-08 | 4 |
wall of intestine | 2.11e-08 | 4 |
gastrointestinal system mucosa | 2.11e-08 | 4 |
gastrointestinal system epithelium | 2.11e-08 | 4 |
intestinal epithelium | 2.11e-08 | 4 |
digestive system | 3.33e-07 | 145 |
digestive tract | 3.33e-07 | 145 |
primitive gut | 3.33e-07 | 145 |