FFCP PHASE1:Hg19::chr10:49545160..49545164,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:49545160..49545164,+ | |||
|coexpression_cluster_id=C3022 | |||
|description=CAGE_peak_at_chr10:49545160..49545164,+ | |description=CAGE_peak_at_chr10:49545160..49545164,+ | ||
|id=chr10:49545160..49545164,+ | |id=chr10:49545160..49545164,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;7.40e-13;3!CL:0000623;1.29e-12;3!CL:0000791;3.75e-08;18!CL:0000789;3.75e-08;18!CL:0002419;3.75e-08;18!CL:0000081;9.57e-08;11!CL:0000624;5.91e-07;6!CL:0002393;9.82e-07;6!CL:0002397;9.82e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,6.20e-13,3;CL:0000623,8.84e-13,3;CL:0000825,8.84e-13,3;CL:0000738,1.35e-08,136;CL:0000791,3.45e-08,18;CL:0000789,3.45e-08,18;CL:0002420,3.45e-08,18;CL:0002419,3.45e-08,18;CL:0000790,3.45e-08,18;CL:0000081,9.69e-08,11;CL:0000838,1.34e-07,52;CL:0000542,1.93e-07,53;CL:0000051,1.93e-07,53;CL:0002087,2.47e-07,115;CL:0000988,3.26e-07,177;CL:0000624,5.75e-07,6;CL:0002031,5.88e-07,120;CL:0002032,6.28e-07,161;CL:0000837,6.28e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;3.75e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.78e-08!57;UBERON:0005068!2.78e-08!57;UBERON:0006241!2.78e-08!57;UBERON:0007135!2.78e-08!57;UBERON:0001017!1.25e-07!82;UBERON:0002020!1.60e-07!34;UBERON:0003528!1.60e-07!34;UBERON:0000955!2.33e-07!69;UBERON:0006238!2.33e-07!69;UBERON:0002780!3.94e-07!41;UBERON:0001890!3.94e-07!41;UBERON:0006240!3.94e-07!41;UBERON:0000073!7.56e-07!94;UBERON:0001016!7.56e-07!94;UBERON:0005743!7.92e-07!86;UBERON:0003080!8.09e-07!42 | |ontology_enrichment_uberon=UBERON:0001049!2.78e-08!57;UBERON:0005068!2.78e-08!57;UBERON:0006241!2.78e-08!57;UBERON:0007135!2.78e-08!57;UBERON:0001017!1.25e-07!82;UBERON:0002020!1.60e-07!34;UBERON:0003528!1.60e-07!34;UBERON:0000955!2.33e-07!69;UBERON:0006238!2.33e-07!69;UBERON:0002780!3.94e-07!41;UBERON:0001890!3.94e-07!41;UBERON:0006240!3.94e-07!41;UBERON:0000073!7.56e-07!94;UBERON:0001016!7.56e-07!94;UBERON:0005743!7.92e-07!86;UBERON:0003080!8.09e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.50e-10;20!UBERON:0002619;2.77e-09;22!UBERON:0000956;3.42e-08;25!UBERON:0000203;3.42e-08;25!UBERON:0001872;5.59e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.72e-10,20;UBERON:0002619,2.93e-09,22;UBERON:0000956,3.59e-08,25;UBERON:0000203,3.59e-08,25;UBERON:0001872,7.25e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0.0821005894499457,0,0,0.383829398097213,0,0,0,0,0,0.142169232487422,0,0,2.00544447470142,1.73608696572681,0,0,0,0.145398238779565,0,0,0,0.822335776043652,0.309706370895104,0,0.256160706529101,0,0.689491361473237,0,0,1.12945403725563,0,0,0,0,0,0,0.199463657621632,0.852449501065388,0.580418477257168,0.56738522469114,0,0.502497330513487,1.0429658368404,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0.764546456250458,0,0.560508562981536,0,0.393419540227666,3.93010762749165,3.28962398399215,0,0,0.473447805734733,0,0,0,0,0,0,0.260118695119756,0.657751618414705,0.829050053357545,0,0.741432815810302,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.80642697289893,4.27904313253612,1.73789284659359,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0.205476322550383,0,0,0.591092280605782,2.37190332345469,1.79680250791648,0,0,0,0.167516265334349,0.637938751653163,2.99602809578873,2.99161459204025,0,0,0,0,0.415941723061614,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0.330569830721956,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.185803175125719,0,0.142283686696828,0.159426272728822,0.199579371432817,0,0,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0,0.503865495708552,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0.347249989866585,0.885741385813839,0,0,0.221158519862449,0.295547618953547,0,0.10893846351899,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,1.20990716048664,1.22429104652196,0,0,0,0,0.330991955875499,0,0,0,0.277349346026277,0.347119476670262,0,0.174118413160805,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0.126621591911757,0.391102765469606,0,0.213452994739353,0,0.144090417154106,0,0.514784993585894,0,0.372757606696298,0,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0.340776043570843,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.443716206147409,0,1.52183498429854,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0.414706207840855,0,0,0.150257608997218,0,0,0,0,0,0.796191777397232,0,0,0,0,0,0.214441591374926,0,0,0.463044948647668,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0.764467467344097,0,0.425149840203366,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0.319267718114302,0.41023272848151,1.76450187355203,0,0.322951291263702,0,0.0981477185010256,0,0,0.115525666150338,0.762764190934334,0,0,0,0,0,0.261906694481422,0.49131575253029,0,0.0675375846183947,0,1.03343398250592,0,3.28184885410932,0,0.496211178389294,0.175871244359621,0.127762427639595,0,0.336283722218824,0,0.682986574053893,0,0,0.342976018874837,0.135939465953663,0,0,0,0,0.314231179832004,0,0.913158720509496,0,0.47775168788705,0,0.316027223465453,0.23248285073625,0,0,0,0.17071847709395,0,0,0.236664001461131,0,0,0,0,0,0.782988022584546,0.098150233615243,0,0,0,0,0,0,1.79055697645231,0.118920090777569,0,0.329821550236287,0.301925687133347,0,0.437119121007915,0,0,0,0.196308467114945,0,0.4226557275834,0.339854229375634,0.0939839179798536,0,0.199882311849858,0,0,0.0802413666891683,0,0,0.143339583151451,0.315543124386369,0,0.872701380680755,2.1161073620616,0,0,0,0,0.109265571963696,0.126698501011437,0,0.534434810531121,0.0918948995348449,0.50141507858475,0.0757786982182394,0,0,0.620597975171371,0,0,0.0645889098360061,0,0,0.12729431655633,0.808468755832877,0,0.342233301085281,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0.0821005894499457,0,0,0.383829398097213,0,0,0,0,0,0.142169232487422,0,0,2.00544447470142,1.73608696572681,0,0,0,0.145398238779565,0,0,0,0.822335776043652,0.309706370895104,0,0.256160706529101,0,0.689491361473237,0,0,1.12945403725563,0,0,0,0,0,0,0.199463657621632,0.852449501065388,0.580418477257168,0.56738522469114,0,0.502497330513487,1.0429658368404,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0.764546456250458,0,0.560508562981536,0,0.393419540227666,3.93010762749165,3.28962398399215,0,0,0.473447805734733,0,0,0,0,0,0,0.260118695119756,0.657751618414705,0.829050053357545,0,0.741432815810302,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.80642697289893,4.27904313253612,1.73789284659359,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0.205476322550383,0,0,0.591092280605782,2.37190332345469,1.79680250791648,0,0,0,0.167516265334349,0.637938751653163,2.99602809578873,2.99161459204025,0,0,0,0,0.415941723061614,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0.330569830721956,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.185803175125719,0,0.142283686696828,0.159426272728822,0.199579371432817,0,0,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0,0.503865495708552,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0.347249989866585,0.885741385813839,0,0,0.221158519862449,0.295547618953547,0,0.10893846351899,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,1.20990716048664,1.22429104652196,0,0,0,0,0.330991955875499,0,0,0,0.277349346026277,0.347119476670262,0,0.174118413160805,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0.126621591911757,0.391102765469606,0,0.213452994739353,0,0.144090417154106,0,0.514784993585894,0,0.372757606696298,0,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0.340776043570843,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.443716206147409,0,1.52183498429854,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0.414706207840855,0,0,0.150257608997218,0,0,0,0,0,0.796191777397232,0,0,0,0,0,0.214441591374926,0,0,0.463044948647668,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0.764467467344097,0,0.425149840203366,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0.319267718114302,0.41023272848151,1.76450187355203,0,0.322951291263702,0,0.0981477185010256,0,0,0.115525666150338,0.762764190934334,0,0,0,0,0,0.261906694481422,0.49131575253029,0,0.0675375846183947,0,1.03343398250592,0,3.28184885410932,0,0.496211178389294,0.175871244359621,0.127762427639595,0,0.336283722218824,0,0.682986574053893,0,0,0.342976018874837,0.135939465953663,0,0,0,0,0.314231179832004,0,0.913158720509496,0,0.47775168788705,0,0.316027223465453,0.23248285073625,0,0,0,0.17071847709395,0,0,0.236664001461131,0,0,0,0,0,0.782988022584546,0.098150233615243,0,0,0,0,0,0,1.79055697645231,0.118920090777569,0,0.329821550236287,0.301925687133347,0,0.437119121007915,0,0,0,0.196308467114945,0,0.4226557275834,0.339854229375634,0.0939839179798536,0,0.199882311849858,0,0,0.0802413666891683,0,0,0.143339583151451,0.315543124386369,0,0.872701380680755,2.1161073620616,0,0,0,0,0.109265571963696,0.126698501011437,0,0.534434810531121,0.0918948995348449,0.50141507858475,0.0757786982182394,0,0,0.620597975171371,0,0,0.0645889098360061,0,0,0.12729431655633,0.808468755832877,0,0.342233301085281,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr10:49545160..49545164,+ | |short_description=p@chr10:49545160..49545164,+ | ||
}} | }} |
Latest revision as of 13:56, 23 July 2015
Short description: | p@chr10:49545160..49545164, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:49545160..49545164, + |
Coexpression cluster: | C3022_Neutrophils_CD8_Natural_CD4_duodenum_thyroid_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 6.20e-13 | 3 |
natural killer cell | 8.84e-13 | 3 |
pro-NK cell | 8.84e-13 | 3 |
leukocyte | 1.35e-08 | 136 |
mature alpha-beta T cell | 3.45e-08 | 18 |
alpha-beta T cell | 3.45e-08 | 18 |
immature T cell | 3.45e-08 | 18 |
mature T cell | 3.45e-08 | 18 |
immature alpha-beta T cell | 3.45e-08 | 18 |
blood cell | 9.69e-08 | 11 |
lymphoid lineage restricted progenitor cell | 1.34e-07 | 52 |
lymphocyte | 1.93e-07 | 53 |
common lymphoid progenitor | 1.93e-07 | 53 |
nongranular leukocyte | 2.47e-07 | 115 |
hematopoietic cell | 3.26e-07 | 177 |
CD4-positive, alpha-beta T cell | 5.75e-07 | 6 |
hematopoietic lineage restricted progenitor cell | 5.88e-07 | 120 |
hematopoietic oligopotent progenitor cell | 6.28e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.28e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
neocortex | 3.72e-10 | 20 |
regional part of cerebral cortex | 2.93e-09 | 22 |
cerebral cortex | 3.59e-08 | 25 |
pallium | 3.59e-08 | 25 |
parietal lobe | 7.25e-08 | 5 |