FFCP PHASE1:Hg19::chr10:5075825..5075836,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:5075825..5075836,+ | |||
|coexpression_cluster_id=C326 | |||
|description=CAGE_peak_at_chr10:5075825..5075836,+ | |description=CAGE_peak_at_chr10:5075825..5075836,+ | ||
|id=chr10:5075825..5075836,+ | |id=chr10:5075825..5075836,+ | ||
|ontology_enrichment_celltype=CL:0002150!3.65e-11!3;CL:0000861!3.65e-11!3 | |ontology_enrichment_celltype=CL:0002150!3.65e-11!3;CL:0000861!3.65e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0000082;6.01e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,6.01e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.09e-15;30!UBERON:0009497;8.34e-10;13!UBERON:0008947;1.71e-09;29!UBERON:0006595;2.48e-07;86 | |||
|ontology_enrichment_disease=DOID:305!2.52e-10!106;DOID:14566!2.27e-07!239;DOID:0050687!4.21e-07!143;DOID:162!4.95e-07!235 | |ontology_enrichment_disease=DOID:305!2.52e-10!106;DOID:14566!2.27e-07!239;DOID:0050687!4.21e-07!143;DOID:162!4.95e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:5662;9.99e-30;1!DOID:3151;3.16e-29;1!DOID:3149;3.16e-29;1!DOID:3451;2.37e-15;2!DOID:4159;2.37e-15;2!DOID:0060122;2.37e-15;2!DOID:1324;1.47e-08;15!DOID:5409;2.11e-08;4!DOID:0050615;4.42e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,9.99e-30,1;DOID:3151,4.20e-29,1;DOID:3149,4.20e-29,1;DOID:3451,2.74e-15,2;DOID:4159,2.74e-15,2;DOID:0060122,2.74e-15,2;DOID:305,7.18e-10,106;DOID:1324,1.47e-08,15;DOID:5409,2.11e-08,4;DOID:0050615,4.42e-08,16;DOID:0050687,2.36e-07,143;DOID:7,2.85e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.53e-13!9;UBERON:0001557!5.36e-08!19;UBERON:0008947!2.74e-07!38;UBERON:0003258!2.74e-07!38;UBERON:0000072!6.81e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;1.70e-08;4!UBERON:0003928;1.70e-08;4!UBERON:0000014;2.43e-08;4!UBERON:0003343;2.43e-08;4!UBERON:0004785;2.43e-08;4!UBERON:0004802;6.01e-07;19!UBERON:0000115;6.01e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,1.72e-08,87;UBERON:0003343,2.26e-08,4;UBERON:0004785,2.26e-08,4;UBERON:0000014,2.61e-08,4;UBERON:0008947,2.13e-07,38;UBERON:0003258,2.13e-07,38;UBERON:0001007,3.33e-07,145;UBERON:0001555,3.33e-07,145;UBERON:0007026,3.33e-07,145;UBERON:0004802,6.01e-07,19;UBERON:0000115,6.01e-07,19 | |||
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|phase1_expression=0,0,0,0,0.893922188854576,0,0,0,0,0,0,0,0,0.495065411840187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505754070234305,0,0.55146986366197,0.871517776369625,1.18635309555548,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921722292925374,0.671028323677248,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8587574980756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387025325156341,0.511625219603299,0.410577285266046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0.0846733320657845,0,0,0,0,0,0,0,0,1.0063040627978,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61934462287689,0.704815022316672,0,0,0,0,0,0,0,0,0.5013797880454,0,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0.256241518587947,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29766695682514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2603525096206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0.31020638566432,0,0,0,0.853425474875886,0,0,0,0,0,0,0,2.14597555874024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p@chr10:5075825..5075836,+ | |short_description=p@chr10:5075825..5075836,+ | ||
}} | }} |
Latest revision as of 14:01, 23 July 2015
Short description: | p@chr10:5075825..5075836, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5075825..5075836, + |
Coexpression cluster: | C326_bile_choriocarcinoma_giant_lung_mucinous_glassy_malignant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 6.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
foregut | 1.72e-08 | 87 |
mucosa of oral region | 2.26e-08 | 4 |
respiratory system mucosa | 2.26e-08 | 4 |
zone of skin | 2.61e-08 | 4 |
respiratory primordium | 2.13e-07 | 38 |
endoderm of foregut | 2.13e-07 | 38 |
digestive system | 3.33e-07 | 145 |
digestive tract | 3.33e-07 | 145 |
primitive gut | 3.33e-07 | 145 |
respiratory tract epithelium | 6.01e-07 | 19 |
lung epithelium | 6.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 9.99e-30 | 1 |
skin squamous cell carcinoma | 4.20e-29 | 1 |
keratoacanthoma | 4.20e-29 | 1 |
skin carcinoma | 2.74e-15 | 2 |
skin cancer | 2.74e-15 | 2 |
integumentary system cancer | 2.74e-15 | 2 |
carcinoma | 7.18e-10 | 106 |
lung cancer | 1.47e-08 | 15 |
lung small cell carcinoma | 2.11e-08 | 4 |
respiratory system cancer | 4.42e-08 | 16 |
cell type cancer | 2.36e-07 | 143 |
disease of anatomical entity | 2.85e-07 | 39 |