FFCP PHASE1:Hg19::chr10:65028677..65028708,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221037 | |EntrezGene=221037 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12313 | |HGNC=12313 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_ENST00000469152_5end | |association_with_transcript=-42bp_to_ENST00000469152_5end | ||
|cluster_id=chr10:65028677..65028708,- | |||
|coexpression_cluster_id=C3034 | |||
|description=CAGE_peak_3_at_JMJD1C_5end | |description=CAGE_peak_3_at_JMJD1C_5end | ||
|id=chr10:65028677..65028708,- | |id=chr10:65028677..65028708,- | ||
|ontology_enrichment_celltype=CL:0000738!2.51e-25!140;CL:0002057!1.24e-24!42;CL:0000766!1.66e-22!76;CL:0000860!1.93e-22!45;CL:0002031!3.02e-21!124;CL:0002087!2.05e-19!119;CL:0000839!3.92e-19!70;CL:0000557!8.17e-19!71;CL:0000037!9.54e-19!172;CL:0000566!9.54e-19!172;CL:0002009!6.01e-18!65;CL:0002032!4.19e-17!165;CL:0000837!4.19e-17!165;CL:0002194!6.06e-17!63;CL:0000576!6.06e-17!63;CL:0000040!6.06e-17!63;CL:0000559!6.06e-17!63;CL:0000988!7.06e-16!182;CL:0000763!4.72e-14!112;CL:0000049!4.72e-14!112 | |ontology_enrichment_celltype=CL:0000738!2.51e-25!140;CL:0002057!1.24e-24!42;CL:0000766!1.66e-22!76;CL:0000860!1.93e-22!45;CL:0002031!3.02e-21!124;CL:0002087!2.05e-19!119;CL:0000839!3.92e-19!70;CL:0000557!8.17e-19!71;CL:0000037!9.54e-19!172;CL:0000566!9.54e-19!172;CL:0002009!6.01e-18!65;CL:0002032!4.19e-17!165;CL:0000837!4.19e-17!165;CL:0002194!6.06e-17!63;CL:0000576!6.06e-17!63;CL:0000040!6.06e-17!63;CL:0000559!6.06e-17!63;CL:0000988!7.06e-16!182;CL:0000763!4.72e-14!112;CL:0000049!4.72e-14!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.01e-19;33!CL:0002057;1.01e-19;33!CL:0000576;1.05e-16;48!CL:0000473;2.37e-13;39!CL:0000234;2.37e-13;39!CL:0000766;5.96e-13;69!CL:0002087;3.77e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.79e-27,136;CL:0000860,1.03e-25,42;CL:0002057,1.03e-25,42;CL:0000766,2.62e-25,72;CL:0002031,3.52e-23,120;CL:0000839,1.17e-21,66;CL:0000473,2.05e-21,48;CL:0000234,2.05e-21,48;CL:0000557,2.80e-21,67;CL:0002087,3.03e-21,115;CL:0002009,1.83e-20,61;CL:0000037,4.93e-20,168;CL:0002194,2.25e-19,59;CL:0000576,2.25e-19,59;CL:0000040,2.25e-19,59;CL:0000559,2.25e-19,59;CL:0002032,2.70e-18,161;CL:0000837,2.70e-18,161;CL:0000988,1.08e-17,177;CL:0000763,2.59e-15,108;CL:0000049,2.59e-15,108 | |||
|ontology_enrichment_development_v019=CL:0002057;8.65e-19;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.65e-19!102;UBERON:0003061!5.65e-19!102;UBERON:0002193!1.53e-15!112;UBERON:0002371!3.88e-15!80;UBERON:0001474!5.80e-14!86;UBERON:0004765!4.68e-10!101;UBERON:0001434!4.68e-10!101;UBERON:0002405!3.76e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.47e-21,98;UBERON:0003061,1.47e-21,98;UBERON:0002371,1.46e-17,76;UBERON:0002193,1.47e-17,108;UBERON:0001474,3.95e-16,82;UBERON:0002405,6.60e-14,93;UBERON:0004765,6.62e-14,90;UBERON:0001434,1.77e-10,100 | |||
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| ||
|short_description=p3@JMJD1C | |short_description=p3@JMJD1C | ||
}} | }} |
Latest revision as of 20:27, 18 September 2015
Short description: | p3@JMJD1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_JMJD1C_5end |
Coexpression cluster: | C3034_extraskeletal_Basophils_Natural_CD8_pineal_Neutrophils_CD14 |
Association with transcript: | -42bp_to_ENST00000469152_5end |
EntrezGene: | JMJD1C |
HGNC: | 12313 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.79e-27 | 136 |
classical monocyte | 1.03e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-25 | 42 |
myeloid leukocyte | 2.62e-25 | 72 |
hematopoietic lineage restricted progenitor cell | 3.52e-23 | 120 |
myeloid lineage restricted progenitor cell | 1.17e-21 | 66 |
defensive cell | 2.05e-21 | 48 |
phagocyte | 2.05e-21 | 48 |
granulocyte monocyte progenitor cell | 2.80e-21 | 67 |
nongranular leukocyte | 3.03e-21 | 115 |
macrophage dendritic cell progenitor | 1.83e-20 | 61 |
hematopoietic stem cell | 4.93e-20 | 168 |
monopoietic cell | 2.25e-19 | 59 |
monocyte | 2.25e-19 | 59 |
monoblast | 2.25e-19 | 59 |
promonocyte | 2.25e-19 | 59 |
hematopoietic oligopotent progenitor cell | 2.70e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.70e-18 | 161 |
hematopoietic cell | 1.08e-17 | 177 |
myeloid cell | 2.59e-15 | 108 |
common myeloid progenitor | 2.59e-15 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.47e-21 | 98 |
blood island | 1.47e-21 | 98 |
bone marrow | 1.46e-17 | 76 |
hemolymphoid system | 1.47e-17 | 108 |
bone element | 3.95e-16 | 82 |
immune system | 6.60e-14 | 93 |
skeletal element | 6.62e-14 | 90 |
skeletal system | 1.77e-10 | 100 |