FFCP PHASE1:Hg19::chr10:73638582..73638591,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:73638582..73638591,- | |||
|coexpression_cluster_id=C141 | |||
|description=CAGE_peak_at_chr10:73638582..73638591,- | |description=CAGE_peak_at_chr10:73638582..73638591,- | ||
|id=chr10:73638582..73638591,- | |id=chr10:73638582..73638591,- | ||
|ontology_enrichment_celltype=CL:0000839!6.76e-22!70;CL:0000738!4.80e-21!140;CL:0002031!5.67e-20!124;CL:0000766!6.94e-20!76;CL:0000037!1.11e-19!172;CL:0000566!1.11e-19!172;CL:0002194!5.90e-19!63;CL:0000576!5.90e-19!63;CL:0000040!5.90e-19!63;CL:0000559!5.90e-19!63;CL:0000557!6.26e-19!71;CL:0002087!6.29e-19!119;CL:0000988!2.48e-18!182;CL:0002009!2.73e-18!65;CL:0002032!4.07e-17!165;CL:0000837!4.07e-17!165;CL:0002057!3.29e-16!42;CL:0000763!5.18e-16!112;CL:0000049!5.18e-16!112;CL:0000860!5.40e-15!45;CL:0002393!1.25e-11!9;CL:0002397!1.25e-11!9;CL:0000134!7.60e-07!358 | |ontology_enrichment_celltype=CL:0000839!6.76e-22!70;CL:0000738!4.80e-21!140;CL:0002031!5.67e-20!124;CL:0000766!6.94e-20!76;CL:0000037!1.11e-19!172;CL:0000566!1.11e-19!172;CL:0002194!5.90e-19!63;CL:0000576!5.90e-19!63;CL:0000040!5.90e-19!63;CL:0000559!5.90e-19!63;CL:0000557!6.26e-19!71;CL:0002087!6.29e-19!119;CL:0000988!2.48e-18!182;CL:0002009!2.73e-18!65;CL:0002032!4.07e-17!165;CL:0000837!4.07e-17!165;CL:0002057!3.29e-16!42;CL:0000763!5.18e-16!112;CL:0000049!5.18e-16!112;CL:0000860!5.40e-15!45;CL:0002393!1.25e-11!9;CL:0002397!1.25e-11!9;CL:0000134!7.60e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000084;5.60e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,5.71e-09,25;CL:0000827,5.71e-09,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2531;5.82e-08;51!DOID:0060083;5.82e-08;51!DOID:1036;1.75e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.21e-09,51;DOID:0060083,1.21e-09,51;DOID:1036,1.80e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.27e-18!102;UBERON:0003061!4.27e-18!102;UBERON:0002371!1.82e-16!80;UBERON:0002193!3.77e-16!112;UBERON:0001474!4.17e-15!86;UBERON:0002405!7.46e-14!115;UBERON:0004765!2.07e-12!101;UBERON:0001434!2.07e-12!101;UBERON:0002370!1.39e-07!4;UBERON:0005058!1.39e-07!4;UBERON:0009113!1.39e-07!4;UBERON:0003295!1.39e-07!4;UBERON:0005562!1.39e-07!4 | |ontology_enrichment_uberon=UBERON:0002390!4.27e-18!102;UBERON:0003061!4.27e-18!102;UBERON:0002371!1.82e-16!80;UBERON:0002193!3.77e-16!112;UBERON:0001474!4.17e-15!86;UBERON:0002405!7.46e-14!115;UBERON:0004765!2.07e-12!101;UBERON:0001434!2.07e-12!101;UBERON:0002370!1.39e-07!4;UBERON:0005058!1.39e-07!4;UBERON:0009113!1.39e-07!4;UBERON:0003295!1.39e-07!4;UBERON:0005562!1.39e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.10e-26;2!UBERON:0005058;8.10e-26;2!UBERON:0009113;8.10e-26;2!UBERON:0004177;3.42e-11;5!UBERON:0005057;3.42e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.13e-13,4;UBERON:0005058,1.13e-13,4;UBERON:0009113,1.13e-13,4;UBERON:0003295,1.13e-13,4;UBERON:0005562,1.13e-13,4;UBERON:0003351,1.44e-09,6;UBERON:0004177,2.18e-08,7;UBERON:0005057,2.18e-08,7 | |||
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|short_description=p@chr10:73638582..73638591,- | |short_description=p@chr10:73638582..73638591,- | ||
}} | }} |
Latest revision as of 15:21, 23 July 2015
Short description: | p@chr10:73638582..73638591, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73638582..73638591, - |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 5.71e-09 | 25 |
pro-T cell | 5.71e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.13e-13 | 4 |
hemolymphoid system gland | 1.13e-13 | 4 |
thymic region | 1.13e-13 | 4 |
pharyngeal gland | 1.13e-13 | 4 |
thymus primordium | 1.13e-13 | 4 |
pharyngeal epithelium | 1.44e-09 | 6 |
hemopoietic organ | 2.18e-08 | 7 |
immune organ | 2.18e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.21e-09 | 51 |
immune system cancer | 1.21e-09 | 51 |
chronic leukemia | 1.80e-07 | 8 |