FFCP PHASE1:Hg19::chr10:81370619..81370628,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=653509 | |EntrezGene=653509 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10798 | |HGNC=10798 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWL2,E3VLE0,B4DNP6 | |UniProt=Q8IWL2,E3VLE0,B4DNP6 | ||
|association_with_transcript=-66bp_to_ENST00000372308,ENST00000398636,ENST00000428376,NM_001093770,NM_001164644,NM_001164645,NM_001164646,NM_001164647,NM_005411_5end | |association_with_transcript=-66bp_to_ENST00000372308,ENST00000398636,ENST00000428376,NM_001093770,NM_001164644,NM_001164645,NM_001164646,NM_001164647,NM_005411_5end | ||
|cluster_id=chr10:81370619..81370628,+ | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_5_at_SFTPA1_5end | |description=CAGE_peak_5_at_SFTPA1_5end | ||
|id=chr10:81370619..81370628,+ | |id=chr10:81370619..81370628,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.85e-13;29!UBERON:0001041;9.88e-13;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!7.48e-30!1;UBERON:0006518!7.48e-30!1;UBERON:0008949!7.48e-30!1;UBERON:0000101!7.48e-30!1;UBERON:0002167!7.48e-30!1;UBERON:0002048!2.09e-12!22;UBERON:0000117!2.09e-12!22;UBERON:0000171!2.09e-12!22;UBERON:0000170!2.09e-12!22;UBERON:0005597!2.09e-12!22;UBERON:0000118!2.09e-12!22;UBERON:0005178!2.86e-08!34;UBERON:0002224!2.86e-08!34;UBERON:0005181!4.72e-08!35;UBERON:0005153!1.19e-07!37;UBERON:0008947!1.82e-07!38;UBERON:0003258!1.82e-07!38 | |ontology_enrichment_uberon=UBERON:0002171!7.48e-30!1;UBERON:0006518!7.48e-30!1;UBERON:0008949!7.48e-30!1;UBERON:0000101!7.48e-30!1;UBERON:0002167!7.48e-30!1;UBERON:0002048!2.09e-12!22;UBERON:0000117!2.09e-12!22;UBERON:0000171!2.09e-12!22;UBERON:0000170!2.09e-12!22;UBERON:0005597!2.09e-12!22;UBERON:0000118!2.09e-12!22;UBERON:0005178!2.86e-08!34;UBERON:0002224!2.86e-08!34;UBERON:0005181!4.72e-08!35;UBERON:0005153!1.19e-07!37;UBERON:0008947!1.82e-07!38;UBERON:0003258!1.82e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;6.62e-41;1!UBERON:0006518;6.62e-41;1!UBERON:0008949;6.62e-41;1!UBERON:0000101;6.62e-41;1!UBERON:0002167;6.62e-41;1!UBERON:0002048;4.85e-17;22!UBERON:0000117;4.85e-17;22!UBERON:0000171;4.85e-17;22!UBERON:0000170;4.85e-17;22!UBERON:0005178;3.68e-10;34!UBERON:0002224;3.68e-10;34!UBERON:0000065;3.13e-08;44!UBERON:0005181;4.18e-08;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,6.62e-41,1;UBERON:0006518,6.62e-41,1;UBERON:0008949,6.62e-41,1;UBERON:0000101,6.62e-41,1;UBERON:0002167,6.62e-41,1;UBERON:0002048,4.60e-17,22;UBERON:0000117,4.60e-17,22;UBERON:0000171,4.60e-17,22;UBERON:0000170,4.60e-17,22;UBERON:0005597,4.60e-17,22;UBERON:0000118,4.60e-17,22;UBERON:0005178,2.39e-11,34;UBERON:0002224,2.39e-11,34;UBERON:0005181,4.78e-11,35;UBERON:0005153,1.71e-10,37;UBERON:0008947,3.08e-10,38;UBERON:0003258,3.08e-10,38;UBERON:0005157,2.00e-08,47;UBERON:0000915,1.10e-07,52;UBERON:0000065,1.99e-07,54 | |||
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|short_description=p5@SFTPA1 | |short_description=p5@SFTPA1 | ||
}} | }} |
Latest revision as of 14:22, 19 September 2015
Short description: | p5@SFTPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SFTPA1_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | -66bp_to_ENST00000372308, ENST00000398636, ENST00000428376, NM_001093770, NM_001164644, NM_001164645, NM_001164646, NM_001164647, NM_005411_5end |
EntrezGene: | SFTPA1 |
HGNC: | 10798 |
UniProt: | Q8IWL2E3VLE0B4DNP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 6.62e-41 | 1 |
right lung lobe | 6.62e-41 | 1 |
lower lobe of lung | 6.62e-41 | 1 |
lobe of lung | 6.62e-41 | 1 |
right lung | 6.62e-41 | 1 |
lung | 4.60e-17 | 22 |
respiratory tube | 4.60e-17 | 22 |
respiration organ | 4.60e-17 | 22 |
pair of lungs | 4.60e-17 | 22 |
lung primordium | 4.60e-17 | 22 |
lung bud | 4.60e-17 | 22 |
thoracic cavity element | 2.39e-11 | 34 |
thoracic cavity | 2.39e-11 | 34 |
thoracic segment organ | 4.78e-11 | 35 |
epithelial bud | 1.71e-10 | 37 |
respiratory primordium | 3.08e-10 | 38 |
endoderm of foregut | 3.08e-10 | 38 |
epithelial fold | 2.00e-08 | 47 |
thoracic segment of trunk | 1.10e-07 | 52 |
respiratory tract | 1.99e-07 | 54 |