FFCP PHASE1:Hg19::chr10:90750982..90750999,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59 | |EntrezGene=59 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=130 | |HGNC=130 | ||
|TSSclassifier=strong | |||
|UniProt=F6UVQ4 | |UniProt=F6UVQ4 | ||
|association_with_transcript=45bp_to_ENST00000458159_5end | |association_with_transcript=45bp_to_ENST00000458159_5end | ||
|cluster_id=chr10:90750982..90750999,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_4_at_ACTA2_5end | |description=CAGE_peak_4_at_ACTA2_5end | ||
|id=chr10:90750982..90750999,- | |id=chr10:90750982..90750999,- | ||
|ontology_enrichment_celltype=CL:0000055!1.84e-19!180;CL:0000183!3.26e-16!59;CL:0000187!3.04e-14!54;CL:0000680!3.51e-14!57;CL:0000056!3.51e-14!57;CL:0000355!3.51e-14!57;CL:0000393!9.77e-13!60;CL:0000211!9.77e-13!60;CL:0000192!7.07e-11!42;CL:0000514!7.07e-11!42;CL:0002371!1.90e-10!591;CL:0000220!3.33e-10!246;CL:0000222!3.45e-10!119;CL:0002321!4.33e-10!248;CL:0000057!5.84e-09!75;CL:0000144!1.58e-08!625;CL:0000359!1.38e-07!32;CL:0002494!4.54e-07!16 | |ontology_enrichment_celltype=CL:0000055!1.84e-19!180;CL:0000183!3.26e-16!59;CL:0000187!3.04e-14!54;CL:0000680!3.51e-14!57;CL:0000056!3.51e-14!57;CL:0000355!3.51e-14!57;CL:0000393!9.77e-13!60;CL:0000211!9.77e-13!60;CL:0000192!7.07e-11!42;CL:0000514!7.07e-11!42;CL:0002371!1.90e-10!591;CL:0000220!3.33e-10!246;CL:0000222!3.45e-10!119;CL:0002321!4.33e-10!248;CL:0000057!5.84e-09!75;CL:0000144!1.58e-08!625;CL:0000359!1.38e-07!32;CL:0002494!4.54e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000187;1.93e-07;55!CL:0002494;2.51e-07;16!CL:0000192;3.25e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,7.85e-13,55;CL:0000680,1.26e-11,58;CL:0000056,1.26e-11,58;CL:0000355,1.26e-11,58;CL:0000393,1.50e-10,61;CL:0000211,1.50e-10,61;CL:0000192,1.56e-09,43;CL:0000514,1.56e-09,43;CL:0000222,7.32e-08,121;CL:0002494,1.34e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;3.25e-07;43!CL:0000355;7.72e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!6.65e-15!82;UBERON:0005256!5.34e-14!143;UBERON:0004290!6.88e-14!70;UBERON:0001134!8.52e-13!61;UBERON:0002036!8.52e-13!61;UBERON:0003082!8.52e-13!61;UBERON:0000914!8.81e-13!83;UBERON:0002329!8.81e-13!83;UBERON:0003077!8.81e-13!83;UBERON:0003059!8.81e-13!83;UBERON:0007282!8.81e-13!83;UBERON:0009618!8.81e-13!83;UBERON:0007285!8.81e-13!83;UBERON:0002100!9.68e-13!216;UBERON:0004872!9.94e-13!84;UBERON:0002385!3.92e-12!63;UBERON:0001015!3.92e-12!63;UBERON:0000383!3.92e-12!63;UBERON:0004535!7.95e-11!110;UBERON:0002049!2.05e-10!79;UBERON:0007798!2.05e-10!79;UBERON:0000490!2.25e-10!138;UBERON:0001009!2.46e-10!113;UBERON:0003914!3.56e-10!118;UBERON:0003104!3.70e-09!238;UBERON:0009142!3.70e-09!238;UBERON:0003103!7.55e-09!69;UBERON:0000475!4.34e-08!365;UBERON:0001981!8.36e-08!60;UBERON:0007500!8.36e-08!60;UBERON:0004537!8.36e-08!60;UBERON:0006965!8.36e-08!60;UBERON:0000055!8.61e-08!69;UBERON:0000119!2.07e-07!312;UBERON:0000948!2.11e-07!24;UBERON:0005498!2.11e-07!24;UBERON:0004140!2.11e-07!24;UBERON:0009881!2.11e-07!24;UBERON:0004141!2.11e-07!24;UBERON:0003084!2.11e-07!24;UBERON:0007005!2.11e-07!24;UBERON:0004139!2.11e-07!24;UBERON:0004291!2.11e-07!24;UBERON:0000481!3.05e-07!347;UBERON:0000483!3.28e-07!309;UBERON:0001008!7.05e-07!45;UBERON:0009569!7.28e-07!113;UBERON:0001637!9.28e-07!42;UBERON:0003509!9.28e-07!42;UBERON:0004572!9.28e-07!42 | |ontology_enrichment_uberon=UBERON:0000486!6.65e-15!82;UBERON:0005256!5.34e-14!143;UBERON:0004290!6.88e-14!70;UBERON:0001134!8.52e-13!61;UBERON:0002036!8.52e-13!61;UBERON:0003082!8.52e-13!61;UBERON:0000914!8.81e-13!83;UBERON:0002329!8.81e-13!83;UBERON:0003077!8.81e-13!83;UBERON:0003059!8.81e-13!83;UBERON:0007282!8.81e-13!83;UBERON:0009618!8.81e-13!83;UBERON:0007285!8.81e-13!83;UBERON:0002100!9.68e-13!216;UBERON:0004872!9.94e-13!84;UBERON:0002385!3.92e-12!63;UBERON:0001015!3.92e-12!63;UBERON:0000383!3.92e-12!63;UBERON:0004535!7.95e-11!110;UBERON:0002049!2.05e-10!79;UBERON:0007798!2.05e-10!79;UBERON:0000490!2.25e-10!138;UBERON:0001009!2.46e-10!113;UBERON:0003914!3.56e-10!118;UBERON:0003104!3.70e-09!238;UBERON:0009142!3.70e-09!238;UBERON:0003103!7.55e-09!69;UBERON:0000475!4.34e-08!365;UBERON:0001981!8.36e-08!60;UBERON:0007500!8.36e-08!60;UBERON:0004537!8.36e-08!60;UBERON:0006965!8.36e-08!60;UBERON:0000055!8.61e-08!69;UBERON:0000119!2.07e-07!312;UBERON:0000948!2.11e-07!24;UBERON:0005498!2.11e-07!24;UBERON:0004140!2.11e-07!24;UBERON:0009881!2.11e-07!24;UBERON:0004141!2.11e-07!24;UBERON:0003084!2.11e-07!24;UBERON:0007005!2.11e-07!24;UBERON:0004139!2.11e-07!24;UBERON:0004291!2.11e-07!24;UBERON:0000481!3.05e-07!347;UBERON:0000483!3.28e-07!309;UBERON:0001008!7.05e-07!45;UBERON:0009569!7.28e-07!113;UBERON:0001637!9.28e-07!42;UBERON:0003509!9.28e-07!42;UBERON:0004572!9.28e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0001801;5.46e-07;14 | |||
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| ||
|short_description=p4@ACTA2 | |short_description=p4@ACTA2 | ||
}} | }} |
Latest revision as of 20:49, 19 September 2015
Short description: | p4@ACTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACTA2_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 45bp_to_ENST00000458159_5end |
EntrezGene: | ACTA2 |
HGNC: | 130 |
UniProt: | F6UVQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 7.85e-13 | 55 |
muscle precursor cell | 1.26e-11 | 58 |
myoblast | 1.26e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.26e-11 | 58 |
electrically responsive cell | 1.50e-10 | 61 |
electrically active cell | 1.50e-10 | 61 |
smooth muscle cell | 1.56e-09 | 43 |
smooth muscle myoblast | 1.56e-09 | 43 |
mesodermal cell | 7.32e-08 | 121 |
cardiocyte | 1.34e-07 | 16 |