FFCP PHASE1:Hg19::chr10:97007118..97007124,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9124 | |EntrezGene=9124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2067 | |HGNC=2067 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=252bp_to_ENST00000490391_5end | |association_with_transcript=252bp_to_ENST00000490391_5end | ||
|cluster_id=chr10:97007118..97007124,- | |||
|description=CAGE_peak_8_at_PDLIM1_5end | |description=CAGE_peak_8_at_PDLIM1_5end | ||
|id=chr10:97007118..97007124,- | |id=chr10:97007118..97007124,- | ||
|ontology_enrichment_celltype=CL:0000066!1.02e-10!254;CL:0002321!2.99e-08!248;CL:0000220!8.30e-08!246 | |ontology_enrichment_celltype=CL:0000066!1.02e-10!254;CL:0002321!2.99e-08!248;CL:0000220!8.30e-08!246 | ||
|ontology_enrichment_celltype_v019=CL:0000244;3.99e-13;4!CL:0000731;3.99e-13;4!CL:0002231;3.51e-08;3!CL:0000077;6.16e-07;19!CL:0000785;9.47e-07;1!CL:0000819;9.47e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.61e-13,4;CL:0000731,2.61e-13,4;CL:0002231,3.06e-08,3;CL:0000819,4.18e-07,1;CL:0000077,4.60e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3350;7.62e-12;2!DOID:3151;9.47e-07;1!DOID:0060073;9.47e-07;1!DOID:8675;9.47e-07;1!DOID:6193;9.47e-07;1!DOID:3149;9.47e-07;1!DOID:3571;9.47e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,2.67e-11,2;DOID:0060073,4.18e-07,1;DOID:8675,4.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.06e-07!169;UBERON:0000925!2.06e-07!169;UBERON:0006595!2.06e-07!169 | |ontology_enrichment_uberon=UBERON:0004119!2.06e-07!169;UBERON:0000925!2.06e-07!169;UBERON:0006595!2.06e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.35e-10;5!UBERON:0005910;6.61e-09;6!UBERON:0002367;4.61e-08;11!UBERON:0010147;4.61e-08;11!UBERON:0003937;2.14e-07;12!UBERON:0005399;2.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,9.61e-11,5;UBERON:0005910,5.00e-09,6;UBERON:0002367,5.09e-08,11;UBERON:0010147,5.09e-08,11;UBERON:0009846,5.09e-08,11;UBERON:0003353,5.09e-08,11;UBERON:0004902,5.09e-08,11;UBERON:0003820,5.09e-08,11;UBERON:0009847,5.09e-08,11;UBERON:0003937,2.34e-07,12;UBERON:0005399,2.34e-07,12 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.563817616383885,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,0.655324116390517,1.31883489114227,0,0,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0.408001382488506,0,0,0,0.251085279189606,0.305653622991805,0.246301768349837,0.314843125254717,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0,0.569212969109448,1.17447437874188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,1.55210578223795,0.087834785693126,0.196468613246569,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0,0,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0.488124115096339,0,0,0.17859945656816,0,0.337834441449967,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.74000264525148,0,0.808264032418128,0.163461903113459,0.302714855289863,2.30470369792,0,0.312160076830321,0,0,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.989067717114227,0,0,0,0.125118519871964,0.277064115484183,0,1.22595118319608,0,0.113432183160021,0,0.85422955527427,0.423863802319124,0.300091096084402,0.412210116953756,0,0.37223371266318,0,0.389748020644795,0,0.0920498986422993,0.161646056818812,0,0.201504196455281,0,0.57978255948989,0,0,0.365921118388786,0.397589304964456,0.116193942869518,0.207322110030741,0,0,1.56449532329816,0.643240938192885,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0,0,0.614942192715568,0,0.109750285408626,1.1240175325762,0.100528972411631,0.277765335475589,0,0,0,0,0.352226082707465,0.433099343283221,0.462985512576611,0.380508304469197,1.58040879591855,0,0,0,0,0.93733833986777,1.51183915378974,0.850650583454319,0.179117045405697,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0.224262168690721,0,0.1466765716419,0.258543431515556,0,0.845302752556,0,0,0,0,0.532844358032199,1.00084595560703,0,0,0,0,0,0.602878754119172,1.74306691720059,0.299918973546171,0,0,0,0,1.14861935834114,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.892144943985809,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0.303127571446259,3.32870879020994,0.907170879989041,0,0,0,0.256278298511402,0,0.160853921143607,0,0.308419387605311,0,0.0821271560138091,1.03850885836724,0,1.0877350463246,1.80455823272956,0.368323955743585,0.574072240823034,0.728364672026868,1.18011973463482,0,0.0770153371044148,0,0,0.211103257785751,0,0.510281115829547,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0.183138929636687,0.082509499920588,0,2.60024098414608,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0.826424576804891,0.768760269460425,0,0.2023155617111,1.39453664789186,0,0,0.616067160352178,0,0,0,0.572499546967965,0.372158369359667,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0.899362287916574,0.823611089208164,0.353437207037059,0,0,0,0.975267478179181,0.487426979262569,0,0,1.1312434556297,0,0,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0.0962221127255121,0.670302275535787,0,0,1.29151611801369,1.68471475667626,2.21715076768338,0.229723400206959,0,0,0.569647187174163,0.714695326373367,0,0,0,0,0,0,0.490080431962063,0.185803175125719,0.865615277858669,0,0,0,0,0,0,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0.37428108081644,0.439524537815682,0,0,0.284136146806413,0,0.296964680832639,0.307160702099232,0,0,0,0,0.211125408127993,0.398495976502139,0,0,0.511343412510774,0,0.622079175323615,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0.23056390438806,0,0.760531603454056,0.31900115973192,0.915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0.265372693510018,0,0,0,0,0,0,0,1.82454789215666,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.347119476670262,0,0.261177619741208,0.17472666824203,1.0319161948297,0,0,0.0821154570532092,0.193978032976839,0,0.225980740780532,0,0,0.126621591911757,0.195551382734803,0.160317640503067,0.426905989478705,0.599428828746391,0,0,0.171594997861965,0,0,0.471388069233591,0.135904206073614,0.209205692624666,0.203996435272644,0.288950589901519,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0.717873024576814,0,1.28767814440971,0,0.0671834724867263,1.08089965062721,0,0.157566364614447,0.329663433524666,0.202210631562555,0.196854963029498,0.0846733320657845,0,0,0.643012593860077,0,1.66176135211674,0,0,0,1.0063040627978,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0.7048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| ||
|short_description=p8@PDLIM1 | |short_description=p8@PDLIM1 | ||
}} | }} |
Latest revision as of 02:51, 20 September 2015
Short description: | p8@PDLIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PDLIM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 252bp_to_ENST00000490391_5end |
EntrezGene: | PDLIM1 |
HGNC: | 2067 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.61e-13 | 4 |
urothelial cell | 2.61e-13 | 4 |
epithelial cell of prostate | 3.06e-08 | 3 |
B-1 B cell | 4.18e-07 | 1 |
mesothelial cell | 4.60e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
urothelium | 9.61e-11 | 5 |
transitional epithelium | 5.00e-09 | 6 |
prostate gland | 5.09e-08 | 11 |
male accessory sex gland | 5.09e-08 | 11 |
embryonic cloacal epithelium | 5.09e-08 | 11 |
epithelium of hindgut | 5.09e-08 | 11 |
urogenital sinus epithelium | 5.09e-08 | 11 |
prostate bud | 5.09e-08 | 11 |
prostate field | 5.09e-08 | 11 |
sex gland | 2.34e-07 | 12 |
male reproductive gland | 2.34e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 2.67e-11 | 2 |
lymphatic system cancer | 4.18e-07 | 1 |
lymphosarcoma | 4.18e-07 | 1 |