FFCP PHASE1:Mm9::chr7:134195225..134195237,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=499 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:134195225..134195237,+ | |||
|description=CAGE_peak_at_chr7:134195225..134195237,+ | |description=CAGE_peak_at_chr7:134195225..134195237,+ | ||
|id=chr7:134195225..134195237,+ | |id=chr7:134195225..134195237,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.56e-19!6;CL:0000677!1.56e-19!6;CL:0000212!1.56e-19!6;CL:0000584!1.56e-19!6;CL:0002563!2.41e-18!9;CL:0002251!2.41e-18!9;CL:0000075!9.82e-17!7;CL:0000066!3.79e-11!25;CL:0002076!7.66e-11!15;CL:0000223!5.12e-08!20;CL:0000473!2.04e-07!3;CL:0000627!2.04e-07!3;CL:0000682!2.04e-07!3 | |ontology_enrichment_celltype=CL:0000239!1.56e-19!6;CL:0000677!1.56e-19!6;CL:0000212!1.56e-19!6;CL:0000584!1.56e-19!6;CL:0002563!2.41e-18!9;CL:0002251!2.41e-18!9;CL:0000075!9.82e-17!7;CL:0000066!3.79e-11!25;CL:0002076!7.66e-11!15;CL:0000223!5.12e-08!20;CL:0000473!2.04e-07!3;CL:0000627!2.04e-07!3;CL:0000682!2.04e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.10e-12,6;CL:0000677,1.10e-12,6;CL:0000584,1.10e-12,6;CL:0000682,1.37e-11,3;CL:0000075,5.82e-11,7;CL:0002563,1.18e-08,9;CL:0002251,1.18e-08,9;CL:0000066,4.55e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.03e-37!15;UBERON:0001242!1.31e-28!13;UBERON:0000060!1.31e-28!13;UBERON:0001262!1.31e-28!13;UBERON:0004786!1.31e-28!13;UBERON:0004923!1.84e-22!24;UBERON:0003350!2.41e-18!9;UBERON:0004808!2.41e-18!9;UBERON:0001277!2.41e-18!9;UBERON:0000160!1.66e-16!43;UBERON:0000331!1.23e-15!3;UBERON:0002116!1.23e-15!3;UBERON:0001204!1.23e-15!3;UBERON:0001168!1.23e-15!3;UBERON:0000485!6.13e-15!11;UBERON:0005409!1.77e-11!59;UBERON:0001962!1.79e-10!2;UBERON:0001961!1.79e-10!2;UBERON:0001744!1.79e-10!2;UBERON:0002108!1.64e-07!16;UBERON:0002465!2.92e-07!3 | |ontology_enrichment_uberon=UBERON:0000344!7.03e-37!15;UBERON:0001242!1.31e-28!13;UBERON:0000060!1.31e-28!13;UBERON:0001262!1.31e-28!13;UBERON:0004786!1.31e-28!13;UBERON:0004923!1.84e-22!24;UBERON:0003350!2.41e-18!9;UBERON:0004808!2.41e-18!9;UBERON:0001277!2.41e-18!9;UBERON:0000160!1.66e-16!43;UBERON:0000331!1.23e-15!3;UBERON:0002116!1.23e-15!3;UBERON:0001204!1.23e-15!3;UBERON:0001168!1.23e-15!3;UBERON:0000485!6.13e-15!11;UBERON:0005409!1.77e-11!59;UBERON:0001962!1.79e-10!2;UBERON:0001961!1.79e-10!2;UBERON:0001744!1.79e-10!2;UBERON:0002108!1.64e-07!16;UBERON:0002465!2.92e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.68e-26,15;UBERON:0000331,3.71e-25,3;UBERON:0002116,3.71e-25,3;UBERON:0001204,3.71e-25,3;UBERON:0001168,3.71e-25,3;UBERON:0001242,2.78e-22,13;UBERON:0001262,2.78e-22,13;UBERON:0004786,2.78e-22,13;UBERON:0002108,4.72e-19,4;UBERON:0004923,3.42e-16,24;UBERON:0003199,2.52e-09,1;UBERON:0000160,2.91e-09,31;UBERON:0003350,1.18e-08,9;UBERON:0004808,1.18e-08,9;UBERON:0001277,1.18e-08,9;UBERON:0000485,3.54e-07,11 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,1.00179145989269,8.05820505177071,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,4.5881856213434,0,4.73838195774982,2.37018355954478,10.4512880701006,7.05684363327806,3.32595765982957,0,0,0,0,0.831173226792462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0.454999239389536,0,1.00179145989269,8.05820505177071,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,4.5881856213434,0,4.73838195774982,2.37018355954478,10.4512880701006,7.05684363327806,3.32595765982957,0,0,0,0,0.831173226792462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:134195225..134195237,+ | |short_description=p@chr7:134195225..134195237,+ | ||
}} | }} |
Latest revision as of 06:40, 4 August 2015
Short description: | p@chr7:134195225..134195237, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:134195225..134195237, + |
Coexpression cluster: | MCL_coexpression_mm9:499 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.10e-12 | 6 |
gut absorptive cell | 1.10e-12 | 6 |
enterocyte | 1.10e-12 | 6 |
M cell of gut | 1.37e-11 | 3 |
columnar/cuboidal epithelial cell | 5.82e-11 | 7 |
intestinal epithelial cell | 1.18e-08 | 9 |
epithelial cell of alimentary canal | 1.18e-08 | 9 |
epithelial cell | 4.55e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.68e-26 | 15 |
ileal mucosa | 3.71e-25 | 3 |
ileum | 3.71e-25 | 3 |
mucosa of small intestine | 3.71e-25 | 3 |
wall of small intestine | 3.71e-25 | 3 |
intestinal mucosa | 2.78e-22 | 13 |
wall of intestine | 2.78e-22 | 13 |
gastrointestinal system mucosa | 2.78e-22 | 13 |
small intestine | 4.72e-19 | 4 |
organ component layer | 3.42e-16 | 24 |
egg chamber | 2.52e-09 | 1 |
intestine | 2.91e-09 | 31 |
epithelium of mucosa | 1.18e-08 | 9 |
gastrointestinal system epithelium | 1.18e-08 | 9 |
intestinal epithelium | 1.18e-08 | 9 |
simple columnar epithelium | 3.54e-07 | 11 |