FFCP PHASE1:Hg19::chr15:52029808..52029868,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=256586 | |EntrezGene=256586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28571 | |HGNC=28571 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IV50 | |UniProt=Q8IV50 | ||
|association_with_transcript=451bp_to_NM_153374,uc002abi.2_5end | |association_with_transcript=451bp_to_NM_153374,uc002abi.2_5end | ||
|cluster_id=chr15:52029808..52029868,- | |||
|description=CAGE_peak_1_at_LYSMD2_5end | |description=CAGE_peak_1_at_LYSMD2_5end | ||
|id=chr15:52029808..52029868,- | |id=chr15:52029808..52029868,- | ||
|ontology_enrichment_celltype=CL:0000037!5.54e-22!172;CL:0000566!5.54e-22!172;CL:0002087!7.95e-22!119;CL:0000988!7.20e-21!182;CL:0000738!7.35e-20!140;CL:0002032!1.07e-19!165;CL:0000837!1.07e-19!165;CL:0002031!6.70e-17!124;CL:0000838!3.03e-12!52;CL:0000542!1.57e-11!53;CL:0000051!1.57e-11!53;CL:0000860!6.26e-11!45;CL:0002057!1.94e-10!42;CL:0002194!5.33e-10!63;CL:0000576!5.33e-10!63;CL:0000040!5.33e-10!63;CL:0000559!5.33e-10!63;CL:0000766!1.05e-09!76;CL:0000763!3.01e-09!112;CL:0000049!3.01e-09!112;CL:0002009!5.36e-09!65;CL:0000791!2.18e-07!18;CL:0000789!2.18e-07!18;CL:0002420!2.18e-07!18;CL:0002419!2.18e-07!18;CL:0000790!2.18e-07!18;CL:0000839!4.00e-07!70;CL:0000557!8.47e-07!71 | |ontology_enrichment_celltype=CL:0000037!5.54e-22!172;CL:0000566!5.54e-22!172;CL:0002087!7.95e-22!119;CL:0000988!7.20e-21!182;CL:0000738!7.35e-20!140;CL:0002032!1.07e-19!165;CL:0000837!1.07e-19!165;CL:0002031!6.70e-17!124;CL:0000838!3.03e-12!52;CL:0000542!1.57e-11!53;CL:0000051!1.57e-11!53;CL:0000860!6.26e-11!45;CL:0002057!1.94e-10!42;CL:0002194!5.33e-10!63;CL:0000576!5.33e-10!63;CL:0000040!5.33e-10!63;CL:0000559!5.33e-10!63;CL:0000766!1.05e-09!76;CL:0000763!3.01e-09!112;CL:0000049!3.01e-09!112;CL:0002009!5.36e-09!65;CL:0000791!2.18e-07!18;CL:0000789!2.18e-07!18;CL:0002420!2.18e-07!18;CL:0002419!2.18e-07!18;CL:0000790!2.18e-07!18;CL:0000839!4.00e-07!70;CL:0000557!8.47e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002087;1.82e-07;104!CL:0000791;2.37e-07;18!CL:0000789;2.37e-07;18!CL:0002419;2.37e-07;18!CL:0000542;2.87e-07;53!CL:0000576;9.34e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.57e-21,168;CL:0002087,1.89e-21,115;CL:0000988,2.18e-20,177;CL:0000738,1.99e-19,136;CL:0002032,2.94e-19,161;CL:0000837,2.94e-19,161;CL:0002031,1.73e-16,120;CL:0000838,2.71e-12,52;CL:0000542,1.41e-11,53;CL:0000051,1.41e-11,53;CL:0000473,2.70e-11,48;CL:0000234,2.70e-11,48;CL:0000860,1.93e-10,42;CL:0002057,1.93e-10,42;CL:0002194,1.24e-09,59;CL:0000576,1.24e-09,59;CL:0000040,1.24e-09,59;CL:0000559,1.24e-09,59;CL:0000766,2.64e-09,72;CL:0000763,7.43e-09,108;CL:0000049,7.43e-09,108;CL:0002009,1.28e-08,61;CL:0000791,2.17e-07,18;CL:0000789,2.17e-07,18;CL:0002420,2.17e-07,18;CL:0002419,2.17e-07,18;CL:0000790,2.17e-07,18;CL:0000839,9.77e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-07;42!CL:0000790;2.37e-07;18!CL:0000051;2.87e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.90e-20!115;UBERON:0002193!2.54e-13!112;UBERON:0002390!4.11e-11!102;UBERON:0003061!4.11e-11!102;UBERON:0000178!1.66e-09!15;UBERON:0000179!1.66e-09!15;UBERON:0000463!1.66e-09!15;UBERON:0002405!9.49e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.42e-09;15!UBERON:0000179;1.42e-09;15!UBERON:0000463;1.42e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.14e-19,114;UBERON:0002193,6.33e-13,108;UBERON:0002390,9.98e-11,98;UBERON:0003061,9.98e-11,98;UBERON:0000178,1.66e-09,15;UBERON:0000179,1.66e-09,15;UBERON:0000463,1.66e-09,15;UBERON:0002405,1.76e-07,93 | |||
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| ||
|short_description=p1@LYSMD2 | |short_description=p1@LYSMD2 | ||
}} | }} |
Latest revision as of 01:17, 18 September 2015
Short description: | p1@LYSMD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LYSMD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 451bp_to_NM_153374, uc002abi.2_5end |
EntrezGene: | LYSMD2 |
HGNC: | 28571 |
UniProt: | Q8IV50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.57e-21 | 168 |
nongranular leukocyte | 1.89e-21 | 115 |
hematopoietic cell | 2.18e-20 | 177 |
leukocyte | 1.99e-19 | 136 |
hematopoietic oligopotent progenitor cell | 2.94e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.94e-19 | 161 |
hematopoietic lineage restricted progenitor cell | 1.73e-16 | 120 |
lymphoid lineage restricted progenitor cell | 2.71e-12 | 52 |
lymphocyte | 1.41e-11 | 53 |
common lymphoid progenitor | 1.41e-11 | 53 |
defensive cell | 2.70e-11 | 48 |
phagocyte | 2.70e-11 | 48 |
classical monocyte | 1.93e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.93e-10 | 42 |
monopoietic cell | 1.24e-09 | 59 |
monocyte | 1.24e-09 | 59 |
monoblast | 1.24e-09 | 59 |
promonocyte | 1.24e-09 | 59 |
myeloid leukocyte | 2.64e-09 | 72 |
myeloid cell | 7.43e-09 | 108 |
common myeloid progenitor | 7.43e-09 | 108 |
macrophage dendritic cell progenitor | 1.28e-08 | 61 |
mature alpha-beta T cell | 2.17e-07 | 18 |
alpha-beta T cell | 2.17e-07 | 18 |
immature T cell | 2.17e-07 | 18 |
mature T cell | 2.17e-07 | 18 |
immature alpha-beta T cell | 2.17e-07 | 18 |
myeloid lineage restricted progenitor cell | 9.77e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.14e-19 | 114 |
hemolymphoid system | 6.33e-13 | 108 |
hematopoietic system | 9.98e-11 | 98 |
blood island | 9.98e-11 | 98 |
blood | 1.66e-09 | 15 |
haemolymphatic fluid | 1.66e-09 | 15 |
organism substance | 1.66e-09 | 15 |
immune system | 1.76e-07 | 93 |