FFCP PHASE1:Mm9::chr8:125566314..125566336,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100503178 | |EntrezGene=100503178 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-138bp_to_NR_045268_5end | |association_with_transcript=-138bp_to_NR_045268_5end | ||
|cluster_id=chr8:125566314..125566336,+ | |||
|description=CAGE_peak_3_at_2810013P06Rik_5end | |description=CAGE_peak_3_at_2810013P06Rik_5end | ||
|id=chr8:125566314..125566336,+ | |id=chr8:125566314..125566336,+ | ||
|ontology_enrichment_celltype=CL:0002563!8.52e-08!9;CL:0002251!8.52e-08!9 | |ontology_enrichment_celltype=CL:0002563!8.52e-08!9;CL:0002251!8.52e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.74e-27,9;CL:0002251,6.74e-27,9;CL:0000239,1.62e-18,6;CL:0000677,1.62e-18,6;CL:0000584,1.62e-18,6;CL:0000066,8.72e-17,25;CL:0002076,4.47e-16,15;CL:0000075,6.39e-16,7;CL:0000223,5.33e-12,20;CL:0000682,4.07e-10,3;CL:0002250,6.17e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!3.15e-09!99;UBERON:0000344!8.14e-09!15;UBERON:0003350!8.52e-08!9;UBERON:0004808!8.52e-08!9;UBERON:0001277!8.52e-08!9;UBERON:0001242!1.39e-07!13;UBERON:0000060!1.39e-07!13;UBERON:0001262!1.39e-07!13;UBERON:0004786!1.39e-07!13;UBERON:0004923!5.63e-07!24 | |ontology_enrichment_uberon=UBERON:0000064!3.15e-09!99;UBERON:0000344!8.14e-09!15;UBERON:0003350!8.52e-08!9;UBERON:0004808!8.52e-08!9;UBERON:0001277!8.52e-08!9;UBERON:0001242!1.39e-07!13;UBERON:0000060!1.39e-07!13;UBERON:0001262!1.39e-07!13;UBERON:0004786!1.39e-07!13;UBERON:0004923!5.63e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.74e-27,9;UBERON:0004808,6.74e-27,9;UBERON:0001277,6.74e-27,9;UBERON:0000485,5.51e-22,11;UBERON:0001242,1.41e-18,13;UBERON:0001262,1.41e-18,13;UBERON:0004786,1.41e-18,13;UBERON:0000344,4.47e-16,15;UBERON:0004923,5.92e-10,24;UBERON:0000160,1.23e-07,31 | |||
|phase1_expression=0,1.39590163055744,2.27499619694768,3.93203474698879,1.00179145989269,0.33575854382378,0.467225281191051,0.516493293766305,0.422366166455,0,0.171217968225505,0.239316476986009,0.513602189793617,0.0874204024189974,0,0,1.39912375625629,0.630924330716475,0.137114433605739,0,0.765389611359628,0.198581902401771,0,0.47997726838022,0.68822784320151,2.8711598205751,1.29228598847722,0.861884930743556,0.380046838912748,0,0.221730510655305,0,0,0,1.1554064790051,0.664938581433969,2.04169356262369,0,0,0.523523743973798,0.588231488031014,0,0,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0.439372365468944,0.777719596297134,0,1.43752564364972,0.167782606057736,0,0.336093799142464,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.405017814995072,0,0.285650984403804,0.220868540951614,0.122490799214954,0.287536413054709,0,0,0.255374676170375,0.46081959976873,0.131886287730194,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0.5709193985953,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0.585561594023094,0.209446706813455,0.255457055208591,0.11981512450592,0,0,0.299581278809645,0,0.376963056338593,0.521472960576829,0.255715457330331,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.390361328888111,0.229902104433473,0,0.150704817835715,0.204109497453984,0,0.374806898238915,0.258703370739016,0,0.189106080167819,0.527853372491847,0,0,0.348252166522167,0,0,0,0.772043721344145,0.284163499395593,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0.438599962275997,0,0,0.210289948564127,0.102904612379284,0.330418782983798,0.528901133327089,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0.370191491765402,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0,0,0.345369963731791,0.144649058581512,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0.178368817602071,0.493647061806363,0,0,0,0,0.65954501176592,0.161464426695906,0.361877549568935,0.119372344003136,0.820704498725306,0,0.556275906031529,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0.457556346413045,0,0.279902904647316,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,2.25477175473676,0.149516546043979,0.165458490457098,0,0.129159823477731,0.168956125490778,0.234714477291508,0.2604087696879,0.104859344425711,0,2.01621004380506,0,0,0,0,0.358053391334963,0,0,0.295379054349154,0.302899349844443,0.15241361331,0.201652370273681,0.0974578807397524,0.192423683280659,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0,0.0574354689556133,0,0.347652977834566,0,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.564656282491984,0,0,0,0.135804113845862,0,0,0.29551344712669,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0,1.39590163055744,2.27499619694768,3.93203474698879,1.00179145989269,0.33575854382378,0.467225281191051,0.516493293766305,0.422366166455,0,0.171217968225505,0.239316476986009,0.513602189793617,0.0874204024189974,0,0,1.39912375625629,0.630924330716475,0.137114433605739,0,0.765389611359628,0.198581902401771,0,0.47997726838022,0.68822784320151,2.8711598205751,1.29228598847722,0.861884930743556,0.380046838912748,0,0.221730510655305,0,0,0,1.1554064790051,0.664938581433969,2.04169356262369,0,0,0.523523743973798,0.588231488031014,0,0,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0.439372365468944,0.777719596297134,0,1.43752564364972,0.167782606057736,0,0.336093799142464,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.405017814995072,0,0.285650984403804,0.220868540951614,0.122490799214954,0.287536413054709,0,0,0.255374676170375,0.46081959976873,0.131886287730194,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0.5709193985953,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0.585561594023094,0.209446706813455,0.255457055208591,0.11981512450592,0,0,0.299581278809645,0,0.376963056338593,0.521472960576829,0.255715457330331,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.390361328888111,0.229902104433473,0,0.150704817835715,0.204109497453984,0,0.374806898238915,0.258703370739016,0,0.189106080167819,0.527853372491847,0,0,0.348252166522167,0,0,0,0.772043721344145,0.284163499395593,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0.438599962275997,0,0,0.210289948564127,0.102904612379284,0.330418782983798,0.528901133327089,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0.370191491765402,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0,0,0.345369963731791,0.144649058581512,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0.178368817602071,0.493647061806363,0,0,0,0,0.65954501176592,0.161464426695906,0.361877549568935,0.119372344003136,0.820704498725306,0,0.556275906031529,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0.457556346413045,0,0.279902904647316,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,2.25477175473676,0.149516546043979,0.165458490457098,0,0.129159823477731,0.168956125490778,0.234714477291508,0.2604087696879,0.104859344425711,0,2.01621004380506,0,0,0,0,0.358053391334963,0,0,0.295379054349154,0.302899349844443,0.15241361331,0.201652370273681,0.0974578807397524,0.192423683280659,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0,0.0574354689556133,0,0.347652977834566,0,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.564656282491984,0,0,0,0.135804113845862,0,0,0.29551344712669,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p3@2810013P06Rik | |short_description=p3@2810013P06Rik | ||
}} | }} |
Latest revision as of 16:35, 1 October 2015
Short description: | p3@2810013P06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_2810013P06Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | -138bp_to_NR_045268_5end |
EntrezGene: | 2810013P06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.74e-27 | 9 |
epithelial cell of alimentary canal | 6.74e-27 | 9 |
brush border epithelial cell | 1.62e-18 | 6 |
gut absorptive cell | 1.62e-18 | 6 |
enterocyte | 1.62e-18 | 6 |
epithelial cell | 8.72e-17 | 25 |
endo-epithelial cell | 4.47e-16 | 15 |
columnar/cuboidal epithelial cell | 6.39e-16 | 7 |
endodermal cell | 5.33e-12 | 20 |
M cell of gut | 4.07e-10 | 3 |
intestinal crypt stem cell | 6.17e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 6.74e-27 | 9 |
gastrointestinal system epithelium | 6.74e-27 | 9 |
intestinal epithelium | 6.74e-27 | 9 |
simple columnar epithelium | 5.51e-22 | 11 |
intestinal mucosa | 1.41e-18 | 13 |
wall of intestine | 1.41e-18 | 13 |
gastrointestinal system mucosa | 1.41e-18 | 13 |
mucosa | 4.47e-16 | 15 |
organ component layer | 5.92e-10 | 24 |
intestine | 1.23e-07 | 31 |