FFCP PHASE1:Hg19::chr10:20659504..20659530,+: Difference between revisions
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|id=chr10:20659504..20659530,+
|short_description=p@chr10:20659504..20659530,+
|description=CAGE_peak_at_chr10:20659504..20659530,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:20659504..20659530,+ | |||
|coexpression_cluster_id=C154 | |||
|description=CAGE_peak_at_chr10:20659504..20659530,+ | |||
|id=chr10:20659504..20659530,+ | |||
|ontology_enrichment_celltype=CL:0000039!5.89e-18!7;CL:0000586!5.89e-18!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.21e-29;7!CL:0000586;4.21e-29;7!CL:0000540;1.44e-09;6!CL:0000404;1.44e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.21e-29,7;CL:0000586,4.21e-29,7;CL:0000540,1.44e-09,6;CL:0000031,1.44e-09,6;CL:0000404,1.44e-09,6;CL:0000047,1.69e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.44e-21;10!UBERON:0005564;9.44e-21;10!CL:0000031;1.44e-09;6 | |||
|ontology_enrichment_disease=DOID:2355!2.11e-14!1;DOID:3493!6.58e-08!2;DOID:74!7.52e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.74e-10;22!DOID:2994;4.74e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.74e-10,22;DOID:2994,4.74e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!8.56e-16!8;UBERON:0001831!9.36e-15!1;UBERON:0001567!9.36e-15!1;UBERON:0008801!9.36e-15!1;UBERON:0002370!6.99e-14!4;UBERON:0005058!6.99e-14!4;UBERON:0009113!6.99e-14!4;UBERON:0003295!6.99e-14!4;UBERON:0005562!6.99e-14!4;UBERON:0003408!2.21e-12!10;UBERON:0003135!1.18e-11!11;UBERON:0003351!1.44e-09!6;UBERON:0004177!2.49e-08!7;UBERON:0001829!5.02e-08!2;UBERON:0004089!5.02e-08!2;UBERON:0003127!8.04e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.26e-25;8!UBERON:0003135;5.63e-19;11!UBERON:0000991;1.77e-10;21!UBERON:0003101;4.74e-10;22!UBERON:0000079;4.74e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.26e-25,8;UBERON:0003135,5.63e-19,11;UBERON:0000991,1.77e-10,21;UBERON:0009196,1.77e-10,21;UBERON:0009117,1.77e-10,21;UBERON:0005564,1.77e-10,21;UBERON:0004176,4.74e-10,22;UBERON:0003101,4.74e-10,22;UBERON:0000079,4.74e-10,22 | |||
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|short_description=p@chr10:20659504..20659530,+ | |||
}} | }} |
Latest revision as of 12:29, 23 July 2015
Short description: | p@chr10:20659504..20659530, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:20659504..20659530, + |
Coexpression cluster: | C154_adenocarcinoma_Mesenchymal_Cardiac_small_sacrococcigeal_Smooth_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.21e-29 | 7 |
germ cell | 4.21e-29 | 7 |
neuron | 1.44e-09 | 6 |
neuroblast | 1.44e-09 | 6 |
electrically signaling cell | 1.44e-09 | 6 |
neuronal stem cell | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 1.26e-25 | 8 |
male reproductive organ | 5.63e-19 | 11 |
gonad | 1.77e-10 | 21 |
indifferent external genitalia | 1.77e-10 | 21 |
indifferent gonad | 1.77e-10 | 21 |
gonad primordium | 1.77e-10 | 21 |
external genitalia | 4.74e-10 | 22 |
male organism | 4.74e-10 | 22 |
male reproductive system | 4.74e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.74e-10 | 22 |
germ cell cancer | 4.74e-10 | 22 |