FFCP PHASE1:Hg19::chr10:22725930..22725941,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:22725930..22725941,+
|short_description=p3@LOC100289455
|description=CAGE_peak_3_at_LOC100289455_5end
|association_with_transcript=-67bp_to_AK295718_5end
...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100289455 | |EntrezGene=100289455 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B7Z3C9 | |UniProt=B7Z3C9 | ||
|association_with_transcript=-67bp_to_AK295718_5end | |||
|cluster_id=chr10:22725930..22725941,+ | |||
|description=CAGE_peak_3_at_LOC100289455_5end | |||
|id=chr10:22725930..22725941,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.35e-12!140;CL:0002031!3.96e-11!124;CL:0002087!1.50e-10!119;CL:0002057!1.24e-09!42;CL:0000860!2.14e-08!45;CL:0000988!6.42e-08!182;CL:0000037!7.82e-08!172;CL:0000566!7.82e-08!172;CL:0002032!4.48e-07!165;CL:0000837!4.48e-07!165;CL:0000839!4.95e-07!70;CL:0000766!5.34e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.02e-34;5!CL:0000163;3.48e-19;9!CL:0000860;4.09e-10;33!CL:0002057;4.09e-10;33!CL:0000766;1.83e-09;69!CL:0000473;2.97e-07;39!CL:0000234;2.97e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.29e-34,5;CL:0002028,1.29e-34,5;CL:0002031,7.04e-20,120;CL:0000163,2.18e-19,9;CL:0000839,1.69e-17,66;CL:0000738,2.71e-17,136;CL:0000557,3.22e-17,67;CL:0000766,6.21e-16,72;CL:0002032,2.86e-14,161;CL:0000837,2.86e-14,161;CL:0000037,1.39e-13,168;CL:0000988,8.89e-13,177;CL:0000860,1.44e-11,42;CL:0002057,1.44e-11,42;CL:0002087,3.96e-11,115;CL:0000763,3.81e-10,108;CL:0000049,3.81e-10,108;CL:0000473,4.87e-10,48;CL:0000234,4.87e-10,48;CL:0002194,6.80e-08,59;CL:0000576,6.80e-08,59;CL:0000040,6.80e-08,59;CL:0000559,6.80e-08,59;CL:0002009,1.29e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;2.15e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.04e-15,76;UBERON:0001474,7.98e-14,82;UBERON:0004765,1.81e-12,90;UBERON:0002405,5.07e-12,93;UBERON:0002390,2.47e-11,98;UBERON:0003061,2.47e-11,98;UBERON:0001434,4.46e-11,100;UBERON:0002193,3.81e-10,108 | |||
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| ||
|short_description=p3@LOC100289455 | |||
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Latest revision as of 15:04, 17 September 2015
Short description: | p3@LOC100289455 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC100289455_5end |
Coexpression cluster: | NA |
Association with transcript: | -67bp_to_AK295718_5end |
EntrezGene: | LOC100289455 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.29e-34 | 5 |
basophil mast progenitor cell | 1.29e-34 | 5 |
hematopoietic lineage restricted progenitor cell | 7.04e-20 | 120 |
endocrine cell | 2.18e-19 | 9 |
myeloid lineage restricted progenitor cell | 1.69e-17 | 66 |
leukocyte | 2.71e-17 | 136 |
granulocyte monocyte progenitor cell | 3.22e-17 | 67 |
myeloid leukocyte | 6.21e-16 | 72 |
hematopoietic oligopotent progenitor cell | 2.86e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.86e-14 | 161 |
hematopoietic stem cell | 1.39e-13 | 168 |
hematopoietic cell | 8.89e-13 | 177 |
classical monocyte | 1.44e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.44e-11 | 42 |
nongranular leukocyte | 3.96e-11 | 115 |
myeloid cell | 3.81e-10 | 108 |
common myeloid progenitor | 3.81e-10 | 108 |
defensive cell | 4.87e-10 | 48 |
phagocyte | 4.87e-10 | 48 |
monopoietic cell | 6.80e-08 | 59 |
monocyte | 6.80e-08 | 59 |
monoblast | 6.80e-08 | 59 |
promonocyte | 6.80e-08 | 59 |
macrophage dendritic cell progenitor | 1.29e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.04e-15 | 76 |
bone element | 7.98e-14 | 82 |
skeletal element | 1.81e-12 | 90 |
immune system | 5.07e-12 | 93 |
hematopoietic system | 2.47e-11 | 98 |
blood island | 2.47e-11 | 98 |
skeletal system | 4.46e-11 | 100 |
hemolymphoid system | 3.81e-10 | 108 |