FFCP PHASE1:Hg19::chr11:63438972..63439012,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25923 | |EntrezGene=25923 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24526 | |HGNC=24526 | ||
|TSSclassifier=strong | |||
|UniProt=Q6DD88 | |UniProt=Q6DD88 | ||
|association_with_transcript=70bp_to_NM_015459,uc001nxk.1_5end | |association_with_transcript=70bp_to_NM_015459,uc001nxk.1_5end | ||
|cluster_id=chr11:63438972..63439012,- | |||
|description=CAGE_peak_6_at_ATL3_5end | |description=CAGE_peak_6_at_ATL3_5end | ||
|id=chr11:63438972..63439012,- | |id=chr11:63438972..63439012,- | ||
|ontology_enrichment_celltype=CL:0000066!1.68e-13!254;CL:0000055!1.71e-11!180;CL:0000057!2.57e-10!75;CL:0002076!1.19e-09!43;CL:0000548!7.70e-09!679;CL:0000004!7.70e-09!679;CL:0000255!7.70e-09!679;CL:0000012!1.59e-08!682;CL:0000220!6.33e-08!246;CL:0002620!1.78e-07!23;CL:0002321!1.89e-07!248;CL:0000063!8.57e-07!578;CL:0000223!9.92e-07!59 | |ontology_enrichment_celltype=CL:0000066!1.68e-13!254;CL:0000055!1.71e-11!180;CL:0000057!2.57e-10!75;CL:0002076!1.19e-09!43;CL:0000548!7.70e-09!679;CL:0000004!7.70e-09!679;CL:0000255!7.70e-09!679;CL:0000012!1.59e-08!682;CL:0000220!6.33e-08!246;CL:0002620!1.78e-07!23;CL:0002321!1.89e-07!248;CL:0000063!8.57e-07!578;CL:0000223!9.92e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.53e-08;42!CL:0002620;1.61e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.25e-13,253;CL:0000057,1.07e-10,76;CL:0002076,1.38e-09,42;CL:0002321,8.19e-08,250;CL:0002620,1.50e-07,23;CL:0000223,5.64e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.46e-08!239;DOID:162!5.32e-08!235 | |ontology_enrichment_disease=DOID:14566!2.46e-08!239;DOID:162!5.32e-08!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.82e-08,239;DOID:162,4.49e-08,235 | |||
|ontology_enrichment_uberon=UBERON:0003102!8.62e-11!95;UBERON:0002100!1.40e-09!216;UBERON:0004119!5.34e-09!169;UBERON:0000925!5.34e-09!169;UBERON:0006595!5.34e-09!169;UBERON:0003104!5.90e-09!238;UBERON:0009142!5.90e-09!238;UBERON:0000475!1.31e-08!365;UBERON:0001007!2.12e-07!155;UBERON:0001555!2.12e-07!155;UBERON:0007026!2.12e-07!155;UBERON:0002097!3.00e-07!40;UBERON:0002199!8.60e-07!45;UBERON:0002416!8.60e-07!45 | |ontology_enrichment_uberon=UBERON:0003102!8.62e-11!95;UBERON:0002100!1.40e-09!216;UBERON:0004119!5.34e-09!169;UBERON:0000925!5.34e-09!169;UBERON:0006595!5.34e-09!169;UBERON:0003104!5.90e-09!238;UBERON:0009142!5.90e-09!238;UBERON:0000475!1.31e-08!365;UBERON:0001007!2.12e-07!155;UBERON:0001555!2.12e-07!155;UBERON:0007026!2.12e-07!155;UBERON:0002097!3.00e-07!40;UBERON:0002199!8.60e-07!45;UBERON:0002416!8.60e-07!45 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.07e-12,99;UBERON:0004119,9.65e-09,160;UBERON:0000925,9.65e-09,160;UBERON:0006595,9.65e-09,160;UBERON:0002100,8.61e-08,199;UBERON:0002097,2.01e-07,41;UBERON:0002199,5.77e-07,46;UBERON:0002416,5.77e-07,46;UBERON:0001007,6.68e-07,145;UBERON:0001555,6.68e-07,145;UBERON:0007026,6.68e-07,145 | |||
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| ||
|short_description=p6@ATL3 | |short_description=p6@ATL3 | ||
}} | }} |
Latest revision as of 23:56, 18 September 2015
Short description: | p6@ATL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ATL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 70bp_to_NM_015459, uc001nxk.1_5end |
EntrezGene: | ATL3 |
HGNC: | 24526 |
UniProt: | Q6DD88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.25e-13 | 253 |
fibroblast | 1.07e-10 | 76 |
endo-epithelial cell | 1.38e-09 | 42 |
embryonic cell | 8.19e-08 | 250 |
skin fibroblast | 1.50e-07 | 23 |
endodermal cell | 5.64e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.07e-12 | 99 |
endoderm-derived structure | 9.65e-09 | 160 |
endoderm | 9.65e-09 | 160 |
presumptive endoderm | 9.65e-09 | 160 |
trunk | 8.61e-08 | 199 |
skin of body | 2.01e-07 | 41 |
integument | 5.77e-07 | 46 |
integumental system | 5.77e-07 | 46 |
digestive system | 6.68e-07 | 145 |
digestive tract | 6.68e-07 | 145 |
primitive gut | 6.68e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.82e-08 | 239 |
cancer | 4.49e-08 | 235 |